RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 ULBP3Q9BZM4 244 aa6.75□□□□□ -1.33
CCDC60-204ENST00000539847 SLC5A7Q9GZV3 580 aa6.75□□□□□ -1.33
CCDC60-204ENST00000539847 LAT2Q9GZY6 243 aa6.75□□□□□ -1.33
CCDC60-204ENST00000539847 RAB33BQ9H082 229 aa6.75□□□□□ -1.33
CCDC60-204ENST00000539847 SLC26A1Q9H2B4 701 aa6.75□□□□□ -1.33
CCDC60-204ENST00000539847 SRMSQ9H3Y6 488 aa6.75□□□□□ -1.33
CCDC60-204ENST00000539847 BCO1Q9HAY6 547 aa6.75□□□□□ -1.33
CCDC60-204ENST00000539847 PLEKHA2Q9HB19 425 aa6.75□□□□□ -1.33
CCDC60-204ENST00000539847 PDE7BQ9NP56 450 aa6.75□□□□□ -1.33
CCDC60-204ENST00000539847 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.75□□□□□ -1.33
CCDC60-204ENST00000539847 UBQLN4Q9NRR5 601 aa6.75□□□□□ -1.33
CCDC60-204ENST00000539847 AP5S1Q9NUS5 200 aa6.75□□□□□ -1.33
CCDC60-204ENST00000539847 SEMA5BQ9P283 1151 aa6.75□□□□□ -1.33
CCDC60-204ENST00000539847 PRODH2Q9UF12 536 aa6.75□□□□□ -1.33
CCDC60-204ENST00000539847 MIOXQ9UGB7 285 aa6.75□□□□□ -1.33
CCDC60-204ENST00000539847 KCNG2Q9UJ96 466 aa6.75□□□□□ -1.33
CCDC60-204ENST00000539847 ZNF346Q9UL40 294 aaKnown RBP6.75□□□□□ -1.33
CCDC60-204ENST00000539847 TCFL5Q9UL49 500 aa6.75□□□□□ -1.33
CCDC60-204ENST00000539847 PADI1Q9ULC6 663 aa6.75□□□□□ -1.33
CCDC60-204ENST00000539847 B9D1Q9UPM9 204 aa6.75□□□□□ -1.33
CCDC60-204ENST00000539847 KCNK6Q9Y257 313 aa6.75□□□□□ -1.33
CCDC60-204ENST00000539847 MRPS33Q9Y291 106 aaKnown RBP6.75□□□□□ -1.33
CCDC60-204ENST00000539847 RHBDD3Q9Y3P4 386 aa6.75□□□□□ -1.33
CCDC60-204ENST00000539847 TMED3Q9Y3Q3 217 aa6.75□□□□□ -1.33
CCDC60-204ENST00000539847 MRPS18BQ9Y676 258 aaKnown RBP6.75□□□□□ -1.33
CCDC60-204ENST00000539847 R4GMQ9 66 aa6.75□□□□□ -1.33
CCDC60-204ENST00000539847 C2CD3Q4AC94 2353 aa6.74□□□□□ -1.33
CCDC60-204ENST00000539847 UTP20O75691 2785 aaKnown RBP6.74□□□□□ -1.33
CCDC60-204ENST00000539847 WIPF3A6NGB9 483 aa6.74□□□□□ -1.33
CCDC60-204ENST00000539847 NPIPB13A6NJU9 1138 aa6.74□□□□□ -1.33
CCDC60-204ENST00000539847 NPIPB4C9JG80 1138 aa6.74□□□□□ -1.33
CCDC60-204ENST00000539847 H0YGG7 62 aa6.74□□□□□ -1.33
CCDC60-204ENST00000539847 H0YIZ8 118 aa6.74□□□□□ -1.33
CCDC60-204ENST00000539847 H3BML4 177 aa6.74□□□□□ -1.33
CCDC60-204ENST00000539847 XKRYO14609 159 aa6.74□□□□□ -1.33
CCDC60-204ENST00000539847 OR10H2O60403 315 aa6.74□□□□□ -1.33
CCDC60-204ENST00000539847 TUSC2O75896 110 aa6.74□□□□□ -1.33
CCDC60-204ENST00000539847 STATHP02808 62 aa6.74□□□□□ -1.33
CCDC60-204ENST00000539847 HOXB5P09067 269 aa6.74□□□□□ -1.33
CCDC60-204ENST00000539847 SFTA3P0C7M3 94 aa6.74□□□□□ -1.33
CCDC60-204ENST00000539847 SEC11BP0C7V7 166 aa6.74□□□□□ -1.33
CCDC60-204ENST00000539847 FGF5P12034 268 aa6.74□□□□□ -1.33
CCDC60-204ENST00000539847 HPGDP15428 266 aa6.74□□□□□ -1.33
CCDC60-204ENST00000539847 ZNF28P17035 718 aa6.74□□□□□ -1.33
CCDC60-204ENST00000539847 RAB5AP20339 215 aa6.74□□□□□ -1.33
CCDC60-204ENST00000539847 HOXA5P20719 270 aa6.74□□□□□ -1.33
CCDC60-204ENST00000539847 PTNP21246 168 aa6.74□□□□□ -1.33
CCDC60-204ENST00000539847 FPR2P25090 351 aa6.74□□□□□ -1.33
CCDC60-204ENST00000539847 LAP3P28838 519 aa6.74□□□□□ -1.33
CCDC60-204ENST00000539847 CRABP1P29762 137 aa6.74□□□□□ -1.33
CCDC60-204ENST00000539847 HTR5AP47898 357 aa6.74□□□□□ -1.33
CCDC60-204ENST00000539847 DNASE1L1P49184 302 aa6.74□□□□□ -1.33
CCDC60-204ENST00000539847 PGDP52209 483 aa6.74□□□□□ -1.33
CCDC60-204ENST00000539847 ARF3P61204 181 aaPredicted RBP6.74□□□□□ -1.33
CCDC60-204ENST00000539847 SRSF3P84103 164 aaKnown RBP6.74□□□□□ -1.33
CCDC60-204ENST00000539847 EXOSC7Q15024 291 aaKnown RBP6.74□□□□□ -1.33
CCDC60-204ENST00000539847 MEP1BQ16820 701 aa6.74□□□□□ -1.33
CCDC60-204ENST00000539847 SCGB2B2Q4G0G5 96 aa6.74□□□□□ -1.33
CCDC60-204ENST00000539847 MESTQ5EB52 335 aa6.74□□□□□ -1.33
CCDC60-204ENST00000539847 TMEM268Q5VZI3 342 aa6.74□□□□□ -1.33
CCDC60-204ENST00000539847 RTL6Q6ICC9 239 aa6.74□□□□□ -1.33
CCDC60-204ENST00000539847 ASPHD2Q6ICH7 369 aa6.74□□□□□ -1.33
CCDC60-204ENST00000539847 ZNF529Q6P280 563 aa6.74□□□□□ -1.33
CCDC60-204ENST00000539847 TRAPPC6BQ86SZ2 158 aa6.74□□□□□ -1.33
CCDC60-204ENST00000539847 CD163Q86VB7 1156 aa6.74□□□□□ -1.33
CCDC60-204ENST00000539847 FJX1Q86VR8 437 aa6.74□□□□□ -1.33
CCDC60-204ENST00000539847 SLC22A24Q8N4F4 322 aa6.74□□□□□ -1.33
CCDC60-204ENST00000539847 WDSUB1Q8N9V3 476 aa6.74□□□□□ -1.33
CCDC60-204ENST00000539847 PNLDC1Q8NA58 520 aaKnown RBP6.74□□□□□ -1.33
CCDC60-204ENST00000539847 ZSCAN4Q8NAM6 433 aaPredicted RBP6.74□□□□□ -1.33
CCDC60-204ENST00000539847 UBAC2Q8NBM4 344 aa6.74□□□□□ -1.33
CCDC60-204ENST00000539847 POC1AQ8NBT0 407 aa6.74□□□□□ -1.33
CCDC60-204ENST00000539847 LFNGQ8NES3 379 aa6.74□□□□□ -1.33
CCDC60-204ENST00000539847 OR51A4Q8NGJ6 313 aa6.74□□□□□ -1.33
CCDC60-204ENST00000539847 OR10AC1Q8NH08 325 aa6.74□□□□□ -1.33
CCDC60-204ENST00000539847 PPP1R35Q8TAP8 253 aa6.74□□□□□ -1.33
CCDC60-204ENST00000539847 NUBPLQ8TB37 319 aa6.74□□□□□ -1.33
CCDC60-204ENST00000539847 CPT1CQ8TCG5 803 aa6.74□□□□□ -1.33
CCDC60-204ENST00000539847 TMED6Q8WW62 240 aa6.74□□□□□ -1.33
CCDC60-204ENST00000539847 MRGPRFQ96AM1 343 aa6.74□□□□□ -1.33
CCDC60-204ENST00000539847 MVB12AQ96EY5 273 aa6.74□□□□□ -1.33
CCDC60-204ENST00000539847 SLC25A44Q96H78 314 aaPredicted RBP6.74□□□□□ -1.33
CCDC60-204ENST00000539847 SGCZQ96LD1 299 aa6.74□□□□□ -1.33
CCDC60-204ENST00000539847 TSPAN32Q96QS1 320 aa6.74□□□□□ -1.33
CCDC60-204ENST00000539847 SELENOIQ9C0D9 397 aa6.74□□□□□ -1.33
CCDC60-204ENST00000539847 FAM212BQ9NTI7 297 aaPredicted RBP6.74□□□□□ -1.33
CCDC60-204ENST00000539847 TBC1D29Q9UFV1 150 aa6.74□□□□□ -1.33
CCDC60-204ENST00000539847 SLC5A6Q9Y289 635 aa6.74□□□□□ -1.33
CCDC60-204ENST00000539847 TMED7Q9Y3B3 224 aa6.74□□□□□ -1.33
CCDC60-204ENST00000539847 STRAPQ9Y3F4 350 aaKnown RBP6.74□□□□□ -1.33
CCDC60-204ENST00000539847 CACNA1DQ01668 2161 aa6.74□□□□□ -1.33
CCDC60-204ENST00000539847 TRAV36DV7A0A075B6V5 113 aa6.73□□□□□ -1.33
CCDC60-204ENST00000539847 IGLV1-36A0A0B4J1U3 117 aa6.73□□□□□ -1.33
CCDC60-204ENST00000539847 PRSS37A4D1T9 235 aa6.73□□□□□ -1.33
CCDC60-204ENST00000539847 A6NIZ1 184 aa6.73□□□□□ -1.33
CCDC60-204ENST00000539847 OR52A4PA6NMU1 304 aa6.73□□□□□ -1.33
CCDC60-204ENST00000539847 TMEM14DPA8MWL7 114 aa6.73□□□□□ -1.33
CCDC60-204ENST00000539847 EEF1E1-BLOC1S5C9J1V9 151 aa6.73□□□□□ -1.33
CCDC60-204ENST00000539847 PSMD9O00233 223 aa6.73□□□□□ -1.33
CCDC60-204ENST00000539847 DCTN6O00399 190 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms