RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 OCSTAMPQ9BR26 566 aa12.28□□□□□ -0.44
UBE3B-210ENST00000539599 ZC4H2Q9NQZ6 224 aa12.28□□□□□ -0.44
UBE3B-210ENST00000539599 FBLN5Q9UBX5 448 aa12.28□□□□□ -0.44
UBE3B-210ENST00000539599 TLX3O43711 291 aaPredicted RBP12.27□□□□□ -0.44
UBE3B-210ENST00000539599 SCGB1D2O95969 90 aa12.27□□□□□ -0.44
UBE3B-210ENST00000539599 NAT1P18440 290 aa12.27□□□□□ -0.44
UBE3B-210ENST00000539599 MTCP1P56278 107 aa12.27□□□□□ -0.44
UBE3B-210ENST00000539599 ECH1Q13011 328 aa12.27□□□□□ -0.44
UBE3B-210ENST00000539599 LHFPL1Q86WI0 220 aa12.27□□□□□ -0.44
UBE3B-210ENST00000539599 SEMA6DQ8NFY4 1073 aa12.27□□□□□ -0.44
UBE3B-210ENST00000539599 OR4A4PQ8NGN8 299 aa12.27□□□□□ -0.44
UBE3B-210ENST00000539599 CLDN23Q96B33 292 aa12.27□□□□□ -0.44
UBE3B-210ENST00000539599 S100A13Q99584 98 aa12.27□□□□□ -0.44
UBE3B-210ENST00000539599 HRH4Q9H3N8 390 aa12.27□□□□□ -0.44
UBE3B-210ENST00000539599 PLEKHJ1Q9NW61 149 aa12.27□□□□□ -0.44
UBE3B-210ENST00000539599 MED19A0JLT2 244 aaPredicted RBP12.27□□□□□ -0.45
UBE3B-210ENST00000539599 SERPINA5P05154 406 aa12.27□□□□□ -0.45
UBE3B-210ENST00000539599 FPR2P25090 351 aa12.27□□□□□ -0.45
UBE3B-210ENST00000539599 OTX2P32243 289 aa12.27□□□□□ -0.45
UBE3B-210ENST00000539599 EIF1P41567 113 aaKnown RBP12.27□□□□□ -0.45
UBE3B-210ENST00000539599 SUCLG1P53597 346 aaKnown RBP12.27□□□□□ -0.45
UBE3B-210ENST00000539599 FXYD4P59646 89 aa12.27□□□□□ -0.45
UBE3B-210ENST00000539599 KCNMB1Q16558 191 aa12.27□□□□□ -0.45
UBE3B-210ENST00000539599 RPL7L1Q6DKI1 246 aaKnown RBP12.27□□□□□ -0.45
UBE3B-210ENST00000539599 PUSL1Q8N0Z8 303 aaKnown RBP12.27□□□□□ -0.45
UBE3B-210ENST00000539599 EIF4E3Q8N5X7 224 aaKnown RBP12.27□□□□□ -0.45
UBE3B-210ENST00000539599 SLC25A43Q8WUT9 341 aaPredicted RBP12.27□□□□□ -0.45
UBE3B-210ENST00000539599 BSCL2Q96G97 398 aaPredicted RBP12.27□□□□□ -0.45
UBE3B-210ENST00000539599 HPF1Q9NWY4 346 aa12.27□□□□□ -0.45
UBE3B-210ENST00000539599 PISDQ9UG56 409 aa12.27□□□□□ -0.45
UBE3B-210ENST00000539599 PILRBQ9UKJ0 227 aa12.27□□□□□ -0.45
UBE3B-210ENST00000539599 ANAPC10Q9UM13 185 aa12.27□□□□□ -0.45
UBE3B-210ENST00000539599 DNAJC13O75165 2243 aa12.27□□□□□ -0.45
UBE3B-210ENST00000539599 FBXO24O75426 580 aa12.26□□□□□ -0.45
UBE3B-210ENST00000539599 NAT2P11245 290 aa12.26□□□□□ -0.45
UBE3B-210ENST00000539599 PRF1P14222 555 aa12.26□□□□□ -0.45
UBE3B-210ENST00000539599 SSR4P51571 173 aa12.26□□□□□ -0.45
UBE3B-210ENST00000539599 SPEM2Q0P670 501 aa12.26□□□□□ -0.45
UBE3B-210ENST00000539599 AIMP2Q13155 320 aaKnown RBP12.26□□□□□ -0.45
UBE3B-210ENST00000539599 RPS19BP1Q86WX3 136 aaKnown RBP12.26□□□□□ -0.45
UBE3B-210ENST00000539599 BAP18Q8IXM2 172 aa12.26□□□□□ -0.45
UBE3B-210ENST00000539599 FAM89BQ8N5H3 189 aa12.26□□□□□ -0.45
UBE3B-210ENST00000539599 ARRDC1Q8N5I2 433 aa12.26□□□□□ -0.45
UBE3B-210ENST00000539599 TMEM54Q969K7 222 aa12.26□□□□□ -0.45
UBE3B-210ENST00000539599 ZNF845Q96IR2 970 aaPredicted RBP12.26□□□□□ -0.45
UBE3B-210ENST00000539599 GPHA2Q96T91 129 aa12.26□□□□□ -0.45
UBE3B-210ENST00000539599 NKX6-2Q9C056 277 aaPredicted RBP12.26□□□□□ -0.45
UBE3B-210ENST00000539599 CHST5Q9GZS9 411 aa12.26□□□□□ -0.45
UBE3B-210ENST00000539599 SLC26A1Q9H2B4 701 aa12.26□□□□□ -0.45
UBE3B-210ENST00000539599 KNTC1P50748 2209 aa12.26□□□□□ -0.45
UBE3B-210ENST00000539599 TEX13DA0A0J9YY54 714 aaPredicted RBP12.26□□□□□ -0.45
UBE3B-210ENST00000539599 TOR1AO14656 332 aa12.26□□□□□ -0.45
UBE3B-210ENST00000539599 CXCL13O43927 109 aa12.26□□□□□ -0.45
UBE3B-210ENST00000539599 TRAPPC6AO75865 159 aa12.26□□□□□ -0.45
UBE3B-210ENST00000539599 IGLV3-1P01715 115 aa12.26□□□□□ -0.45
UBE3B-210ENST00000539599 LCATP04180 440 aa12.26□□□□□ -0.45
UBE3B-210ENST00000539599 RIPPLY1Q0D2K3 151 aa12.26□□□□□ -0.45
UBE3B-210ENST00000539599 Q0VFX4 171 aa12.26□□□□□ -0.45
UBE3B-210ENST00000539599 WIPI1Q5MNZ9 446 aaPredicted RBP12.26□□□□□ -0.45
UBE3B-210ENST00000539599 FAHD2BQ6P2I3 314 aaPredicted RBP12.26□□□□□ -0.45
UBE3B-210ENST00000539599 PEG10Q86TG7 708 aaKnown RBP12.26□□□□□ -0.45
UBE3B-210ENST00000539599 ASB13Q8WXK3 278 aa12.26□□□□□ -0.45
UBE3B-210ENST00000539599 MARC2Q969Z3 335 aa12.26□□□□□ -0.45
UBE3B-210ENST00000539599 MRPL24Q96A35 216 aaKnown RBP12.26□□□□□ -0.45
UBE3B-210ENST00000539599 FAHD2AQ96GK7 314 aa12.26□□□□□ -0.45
UBE3B-210ENST00000539599 REEP6Q96HR9 211 aa12.26□□□□□ -0.45
UBE3B-210ENST00000539599 PLA2G2EQ9NZK7 142 aa12.26□□□□□ -0.45
UBE3B-210ENST00000539599 V9GYS6 101 aa12.26□□□□□ -0.45
UBE3B-210ENST00000539599 FIGNL2A6NMB9 653 aa12.25□□□□□ -0.45
UBE3B-210ENST00000539599 KLK3P07288 261 aaPredicted RBP12.25□□□□□ -0.45
UBE3B-210ENST00000539599 CCL2P13500 99 aa12.25□□□□□ -0.45
UBE3B-210ENST00000539599 NME2P22392 152 aa12.25□□□□□ -0.45
UBE3B-210ENST00000539599 GSK3AP49840 483 aa12.25□□□□□ -0.45
UBE3B-210ENST00000539599 PMS2CLQ68D20 193 aa12.25□□□□□ -0.45
UBE3B-210ENST00000539599 NECAB3Q96P71 396 aaPredicted RBP12.25□□□□□ -0.45
UBE3B-210ENST00000539599 TSNAXQ99598 290 aaKnown RBP12.25□□□□□ -0.45
UBE3B-210ENST00000539599 NMES1Q9C002 83 aa12.25□□□□□ -0.45
UBE3B-210ENST00000539599 FOXD3Q9UJU5 478 aaPredicted RBP12.25□□□□□ -0.45
UBE3B-210ENST00000539599 NXT1Q9UKK6 140 aaKnown RBP12.25□□□□□ -0.45
UBE3B-210ENST00000539599 DOCK10Q96BY6 2186 aa12.25□□□□□ -0.45
UBE3B-210ENST00000539599 ARPC4-TTLL3A0A0A6YYG9 625 aa12.25□□□□□ -0.45
UBE3B-210ENST00000539599 NSG1A0A0A6YYJ2 146 aa12.25□□□□□ -0.45
UBE3B-210ENST00000539599 IGKV1-12A0A0C4DH73 117 aa12.25□□□□□ -0.45
UBE3B-210ENST00000539599 PINLYPA6NC86 204 aa12.25□□□□□ -0.45
UBE3B-210ENST00000539599 ZNF705EA8MWA4 302 aaPredicted RBP12.25□□□□□ -0.45
UBE3B-210ENST00000539599 GEMIN2O14893 280 aaKnown RBP12.25□□□□□ -0.45
UBE3B-210ENST00000539599 IGKV1D-12P01611 117 aa12.25□□□□□ -0.45
UBE3B-210ENST00000539599 ZNF32P17041 273 aa12.25□□□□□ -0.45
UBE3B-210ENST00000539599 RGS19P49795 217 aa12.25□□□□□ -0.45
UBE3B-210ENST00000539599 LSM6P62312 80 aaKnown RBP12.25□□□□□ -0.45
UBE3B-210ENST00000539599 TCEAL6Q6IPX3 200 aa12.25□□□□□ -0.45
UBE3B-210ENST00000539599 MAML2Q8IZL2 1156 aaPredicted RBP12.25□□□□□ -0.45
UBE3B-210ENST00000539599 OR14L1PQ8NHC6 308 aa12.25□□□□□ -0.45
UBE3B-210ENST00000539599 ABHD3Q8WU67 409 aa12.25□□□□□ -0.45
UBE3B-210ENST00000539599 HAS2Q92819 552 aa12.25□□□□□ -0.45
UBE3B-210ENST00000539599 TCEAL3Q969E4 200 aa12.25□□□□□ -0.45
UBE3B-210ENST00000539599 SULT4A1Q9BR01 284 aa12.25□□□□□ -0.45
UBE3B-210ENST00000539599 ANGPTL4Q9BY76 406 aa12.25□□□□□ -0.45
UBE3B-210ENST00000539599 TLNRD1Q9H1K6 362 aa12.25□□□□□ -0.45
UBE3B-210ENST00000539599 AK3Q9UIJ7 227 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms