RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 Q5PR19 223 aa10.97□□□□□ -0.65
CCDC42-202ENST00000539522 FAM27D1Q5T7N8 215 aa10.97□□□□□ -0.65
CCDC42-202ENST00000539522 OR13C3Q8NGS6 347 aa10.97□□□□□ -0.65
CCDC42-202ENST00000539522 NEU4Q8WWR8 484 aaPredicted RBP10.97□□□□□ -0.65
CCDC42-202ENST00000539522 OR5P3Q8WZ94 311 aa10.97□□□□□ -0.65
CCDC42-202ENST00000539522 AP3S1Q92572 193 aa10.97□□□□□ -0.65
CCDC42-202ENST00000539522 TMEM106AQ96A25 262 aa10.97□□□□□ -0.65
CCDC42-202ENST00000539522 ORAI1Q96D31 301 aa10.97□□□□□ -0.65
CCDC42-202ENST00000539522 ADAT1Q9BUB4 502 aaKnown RBP10.97□□□□□ -0.65
CCDC42-202ENST00000539522 RAB1BQ9H0U4 201 aa10.97□□□□□ -0.65
CCDC42-202ENST00000539522 GCM1Q9NP62 436 aa10.97□□□□□ -0.65
CCDC42-202ENST00000539522 CKLFQ9UBR5 152 aa10.97□□□□□ -0.65
CCDC42-202ENST00000539522 IL19Q9UHD0 177 aa10.97□□□□□ -0.65
CCDC42-202ENST00000539522 ITGB1BP2Q9UKP3 347 aa10.97□□□□□ -0.65
CCDC42-202ENST00000539522 FOXJ3Q9UPW0 622 aa10.97□□□□□ -0.65
CCDC42-202ENST00000539522 YLPM1P49750 1951 aaKnown RBP10.97□□□□□ -0.65
CCDC42-202ENST00000539522 ANK3Q12955 4377 aaKnown RBP10.96□□□□□ -0.65
CCDC42-202ENST00000539522 IGKV1-27A0A075B6S5 117 aa10.96□□□□□ -0.65
CCDC42-202ENST00000539522 ZNF816-ZNF321PA0A0X1KG74 233 aa10.96□□□□□ -0.65
CCDC42-202ENST00000539522 SHISA3A0PJX4 238 aa10.96□□□□□ -0.65
CCDC42-202ENST00000539522 MEGF11A6BM72 1044 aa10.96□□□□□ -0.65
CCDC42-202ENST00000539522 ANKRD61A6NGH8 418 aa10.96□□□□□ -0.65
CCDC42-202ENST00000539522 DHRS7CA6NNS2 312 aa10.96□□□□□ -0.65
CCDC42-202ENST00000539522 WNT9BO14905 357 aa10.96□□□□□ -0.65
CCDC42-202ENST00000539522 GMDSO60547 372 aa10.96□□□□□ -0.65
CCDC42-202ENST00000539522 CDC14BO60729 498 aa10.96□□□□□ -0.65
CCDC42-202ENST00000539522 RAB3BP20337 219 aa10.96□□□□□ -0.65
CCDC42-202ENST00000539522 RIPPLY1Q0D2K3 151 aa10.96□□□□□ -0.65
CCDC42-202ENST00000539522 PCGF3Q3KNV8 242 aa10.96□□□□□ -0.65
CCDC42-202ENST00000539522 FAM76BQ5HYJ3 339 aa10.96□□□□□ -0.65
CCDC42-202ENST00000539522 CEP78Q5JTW2 689 aa10.96□□□□□ -0.65
CCDC42-202ENST00000539522 ZBTB37Q5TC79 503 aa10.96□□□□□ -0.65
CCDC42-202ENST00000539522 ZNF529Q6P280 563 aa10.96□□□□□ -0.65
CCDC42-202ENST00000539522 SERPINA12Q8IW75 414 aa10.96□□□□□ -0.65
CCDC42-202ENST00000539522 CIARTQ8N365 385 aaPredicted RBP10.96□□□□□ -0.65
CCDC42-202ENST00000539522 PARP16Q8N5Y8 322 aa10.96□□□□□ -0.65
CCDC42-202ENST00000539522 CSNK2A3Q8NEV1 391 aa10.96□□□□□ -0.65
CCDC42-202ENST00000539522 OR5D14Q8NGL3 314 aa10.96□□□□□ -0.65
CCDC42-202ENST00000539522 C10orf105Q8TEF2 133 aa10.96□□□□□ -0.65
CCDC42-202ENST00000539522 PIGCQ92535 297 aa10.96□□□□□ -0.65
CCDC42-202ENST00000539522 FGGYQ96C11 551 aa10.96□□□□□ -0.65
CCDC42-202ENST00000539522 PAPOLGQ9BWT3 736 aaKnown RBP10.96□□□□□ -0.65
CCDC42-202ENST00000539522 BARHL1Q9BZE3 327 aa10.96□□□□□ -0.65
CCDC42-202ENST00000539522 GPR173Q9NS66 373 aa10.96□□□□□ -0.65
CCDC42-202ENST00000539522 FBXO9Q9UK97 447 aaPredicted RBP10.96□□□□□ -0.65
CCDC42-202ENST00000539522 HIVEP1P15822 2718 aa10.96□□□□□ -0.66
CCDC42-202ENST00000539522 ABCA2Q9BZC7 2435 aa10.96□□□□□ -0.66
CCDC42-202ENST00000539522 SVEP1Q4LDE5 3571 aa10.96□□□□□ -0.66
CCDC42-202ENST00000539522 ANKRD30BLA7E2S9 258 aa10.95□□□□□ -0.66
CCDC42-202ENST00000539522 NOTOA8MTQ0 251 aa10.95□□□□□ -0.66
CCDC42-202ENST00000539522 BMP4P12644 408 aa10.95□□□□□ -0.66
CCDC42-202ENST00000539522 GATA4P43694 442 aa10.95□□□□□ -0.66
CCDC42-202ENST00000539522 OR8G1Q15617 311 aa10.95□□□□□ -0.66
CCDC42-202ENST00000539522 CLEC12BQ2HXU8 276 aa10.95□□□□□ -0.66
CCDC42-202ENST00000539522 MZT2AQ6P582 158 aa10.95□□□□□ -0.66
CCDC42-202ENST00000539522 PRSS57Q6UWY2 283 aa10.95□□□□□ -0.66
CCDC42-202ENST00000539522 ZNF826PQ6ZT77 177 aa10.95□□□□□ -0.66
CCDC42-202ENST00000539522 OR6Q1Q8NGQ2 317 aa10.95□□□□□ -0.66
CCDC42-202ENST00000539522 TBC1D15Q8TC07 691 aa10.95□□□□□ -0.66
CCDC42-202ENST00000539522 ACOT12Q8WYK0 555 aa10.95□□□□□ -0.66
CCDC42-202ENST00000539522 KCTD12Q96CX2 325 aaKnown RBP10.95□□□□□ -0.66
CCDC42-202ENST00000539522 C10orf35Q96D05 121 aa10.95□□□□□ -0.66
CCDC42-202ENST00000539522 DIRC2Q96SL1 478 aa10.95□□□□□ -0.66
CCDC42-202ENST00000539522 TLNRD1Q9H1K6 362 aa10.95□□□□□ -0.66
CCDC42-202ENST00000539522 SAP30LQ9HAJ7 183 aa10.95□□□□□ -0.66
CCDC42-202ENST00000539522 MPC1Q9Y5U8 109 aa10.95□□□□□ -0.66
CCDC42-202ENST00000539522 PEX16Q9Y5Y5 336 aa10.95□□□□□ -0.66
CCDC42-202ENST00000539522 FLNAP21333 2647 aaKnown RBP10.95□□□□□ -0.66
CCDC42-202ENST00000539522 IGHV1-69-2A0A0G2JMI3 117 aa10.94□□□□□ -0.66
CCDC42-202ENST00000539522 PQLC2LA1A4F0 135 aa10.94□□□□□ -0.66
CCDC42-202ENST00000539522 IGFBP3P17936 291 aaPredicted RBP10.94□□□□□ -0.66
CCDC42-202ENST00000539522 GIFP27352 417 aa10.94□□□□□ -0.66
CCDC42-202ENST00000539522 S100A5P33763 92 aa10.94□□□□□ -0.66
CCDC42-202ENST00000539522 BMXP51813 675 aa10.94□□□□□ -0.66
CCDC42-202ENST00000539522 MRPS11P82912 194 aaKnown RBP10.94□□□□□ -0.66
CCDC42-202ENST00000539522 ZNF154Q13106 437 aa10.94□□□□□ -0.66
CCDC42-202ENST00000539522 DYNC1I2Q13409 638 aaKnown RBP10.94□□□□□ -0.66
CCDC42-202ENST00000539522 CEACAM21Q3KPI0 293 aa10.94□□□□□ -0.66
CCDC42-202ENST00000539522 FAM201AQ5SY85 155 aa10.94□□□□□ -0.66
CCDC42-202ENST00000539522 LRRTM1Q86UE6 522 aa10.94□□□□□ -0.66
CCDC42-202ENST00000539522 MOGAT3Q86VF5 341 aa10.94□□□□□ -0.66
CCDC42-202ENST00000539522 ZDHHC23Q8IYP9 409 aa10.94□□□□□ -0.66
CCDC42-202ENST00000539522 FTMTQ8N4E7 242 aa10.94□□□□□ -0.66
CCDC42-202ENST00000539522 CELF2-AS1Q8N7Q2 184 aa10.94□□□□□ -0.66
CCDC42-202ENST00000539522 OR1M1Q8NGA1 313 aa10.94□□□□□ -0.66
CCDC42-202ENST00000539522 RDH5Q92781 318 aa10.94□□□□□ -0.66
CCDC42-202ENST00000539522 Q96MF0 132 aa10.94□□□□□ -0.66
CCDC42-202ENST00000539522 CHST5Q9GZS9 411 aa10.94□□□□□ -0.66
CCDC42-202ENST00000539522 OR51I2Q9H344 312 aa10.94□□□□□ -0.66
CCDC42-202ENST00000539522 PLEKHA1Q9HB21 404 aa10.94□□□□□ -0.66
CCDC42-202ENST00000539522 EDARQ9UNE0 448 aa10.94□□□□□ -0.66
CCDC42-202ENST00000539522 AK6Q9Y3D8 172 aaKnown RBP10.94□□□□□ -0.66
CCDC42-202ENST00000539522 V9GY05 133 aa10.94□□□□□ -0.66
CCDC42-202ENST00000539522 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.93□□□□□ -0.66
CCDC42-202ENST00000539522 NRASP01111 189 aa10.93□□□□□ -0.66
CCDC42-202ENST00000539522 CD37P11049 281 aa10.93□□□□□ -0.66
CCDC42-202ENST00000539522 ZNF20P17024 532 aa10.93□□□□□ -0.66
CCDC42-202ENST00000539522 EGR1P18146 543 aa10.93□□□□□ -0.66
CCDC42-202ENST00000539522 FSTP19883 344 aa10.93□□□□□ -0.66
CCDC42-202ENST00000539522 GNALP38405 381 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms