RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	ENTHD1	Q8IYW4	607 aa		10.21	□□□□□ -0.77
CLTCL1-205	ENST00000538828	KIR3DL3	Q8N743	410 aa		10.21	□□□□□ -0.77
CLTCL1-205	ENST00000538828	LY6G5B	Q8NDX9	201 aa		10.21	□□□□□ -0.77
CLTCL1-205	ENST00000538828	ANGPTL6	Q8NI99	470 aa		10.21	□□□□□ -0.77
CLTCL1-205	ENST00000538828	FAM216A	Q8WUB2	273 aa		10.21	□□□□□ -0.77
CLTCL1-205	ENST00000538828	PP6455	Q8WZ26	134 aa		10.21	□□□□□ -0.77
CLTCL1-205	ENST00000538828	RPL3L	Q92901	407 aa	Known RBP	10.21	□□□□□ -0.77
CLTCL1-205	ENST00000538828	PPP1R14A	Q96A00	147 aa		10.21	□□□□□ -0.77
CLTCL1-205	ENST00000538828	ADI1	Q9BV57	179 aa		10.21	□□□□□ -0.77
CLTCL1-205	ENST00000538828	C19orf24	Q9BVV8	132 aa		10.21	□□□□□ -0.77
CLTCL1-205	ENST00000538828	PKIB	Q9C010	78 aa		10.21	□□□□□ -0.77
CLTCL1-205	ENST00000538828	PPP1R3E	Q9H7J1	279 aa		10.21	□□□□□ -0.77
CLTCL1-205	ENST00000538828	SEBOX	Q9HB31	216 aa	Predicted RBP	10.21	□□□□□ -0.77
CLTCL1-205	ENST00000538828	DNAJB11	Q9UBS4	358 aa		10.21	□□□□□ -0.77
CLTCL1-205	ENST00000538828	RPL36	Q9Y3U8	105 aa	Known RBP	10.21	□□□□□ -0.77
CLTCL1-205	ENST00000538828	KPTN	Q9Y664	436 aa		10.21	□□□□□ -0.77
CLTCL1-205	ENST00000538828	DAPL1	A0PJW8	107 aa		10.2	□□□□□ -0.78
CLTCL1-205	ENST00000538828	PQLC2L	A1A4F0	135 aa		10.2	□□□□□ -0.78
CLTCL1-205	ENST00000538828	ANKRD61	A6NGH8	418 aa		10.2	□□□□□ -0.78
CLTCL1-205	ENST00000538828	C22orf46	C9J442	243 aa		10.2	□□□□□ -0.78
CLTCL1-205	ENST00000538828	CLDN34	H7C241	214 aa		10.2	□□□□□ -0.78
CLTCL1-205	ENST00000538828		J3QT63	122 aa		10.2	□□□□□ -0.78
CLTCL1-205	ENST00000538828	SIGLEC5	O15389	551 aa		10.2	□□□□□ -0.78
CLTCL1-205	ENST00000538828	MAGEB4	O15481	346 aa	Predicted RBP	10.2	□□□□□ -0.78
CLTCL1-205	ENST00000538828	SYT7	O43581	403 aa		10.2	□□□□□ -0.78
CLTCL1-205	ENST00000538828	VENTX	O95231	258 aa		10.2	□□□□□ -0.78
CLTCL1-205	ENST00000538828	SERPINA3	P01011	423 aa		10.2	□□□□□ -0.78
CLTCL1-205	ENST00000538828	DBT	P11182	482 aa	Known RBP	10.2	□□□□□ -0.78
CLTCL1-205	ENST00000538828	GLRA1	P23415	457 aa		10.2	□□□□□ -0.78
CLTCL1-205	ENST00000538828	PDCD1	Q15116	288 aa		10.2	□□□□□ -0.78
CLTCL1-205	ENST00000538828	KLHL22	Q53GT1	634 aa		10.2	□□□□□ -0.78
CLTCL1-205	ENST00000538828	LRRC10	Q5BKY1	277 aa		10.2	□□□□□ -0.78
CLTCL1-205	ENST00000538828	WDR38	Q5JTN6	314 aa		10.2	□□□□□ -0.78
CLTCL1-205	ENST00000538828	TTC23	Q5W5X9	447 aa		10.2	□□□□□ -0.78
CLTCL1-205	ENST00000538828	METAP1D	Q6UB28	335 aa	Predicted RBP	10.2	□□□□□ -0.78
CLTCL1-205	ENST00000538828	MOB3C	Q70IA8	216 aa		10.2	□□□□□ -0.78
CLTCL1-205	ENST00000538828	UTS2B	Q765I0	119 aa		10.2	□□□□□ -0.78
CLTCL1-205	ENST00000538828	ZNF771	Q7L3S4	317 aa	Predicted RBP	10.2	□□□□□ -0.78
CLTCL1-205	ENST00000538828	BOLL	Q8N9W6	283 aa	Known RBP	10.2	□□□□□ -0.78
CLTCL1-205	ENST00000538828	POC1A	Q8NBT0	407 aa		10.2	□□□□□ -0.78
CLTCL1-205	ENST00000538828	C19orf18	Q8NEA5	215 aa		10.2	□□□□□ -0.78
CLTCL1-205	ENST00000538828	DNAAF1	Q8NEP3	725 aa		10.2	□□□□□ -0.78
CLTCL1-205	ENST00000538828	ZNF555	Q8NEP9	628 aa		10.2	□□□□□ -0.78
CLTCL1-205	ENST00000538828	OR2G2	Q8NGZ5	317 aa		10.2	□□□□□ -0.78
CLTCL1-205	ENST00000538828	RNF166	Q96A37	237 aa	Predicted RBP	10.2	□□□□□ -0.78
CLTCL1-205	ENST00000538828	LGALS12	Q96DT0	336 aa		10.2	□□□□□ -0.78
CLTCL1-205	ENST00000538828	SDSL	Q96GA7	329 aa		10.2	□□□□□ -0.78
CLTCL1-205	ENST00000538828	TBX5	Q99593	518 aa		10.2	□□□□□ -0.78
CLTCL1-205	ENST00000538828	TTTY10	Q9BZA0	68 aa		10.2	□□□□□ -0.78
CLTCL1-205	ENST00000538828	CHST5	Q9GZS9	411 aa		10.2	□□□□□ -0.78
CLTCL1-205	ENST00000538828	PLEKHA1	Q9HB21	404 aa		10.2	□□□□□ -0.78
CLTCL1-205	ENST00000538828	SMURF1	Q9HCE7	757 aa		10.2	□□□□□ -0.78
CLTCL1-205	ENST00000538828	NLK	Q9UBE8	527 aa		10.2	□□□□□ -0.78
CLTCL1-205	ENST00000538828	RPUSD1	Q9UJJ7	312 aa	Known RBP	10.2	□□□□□ -0.78
CLTCL1-205	ENST00000538828	GTF2A1L	Q9UNN4	478 aa		10.2	□□□□□ -0.78
CLTCL1-205	ENST00000538828	HSPE1-MOB4	S4R3N1	261 aa		10.2	□□□□□ -0.78
CLTCL1-205	ENST00000538828	DNHD1	Q96M86	4753 aa		10.2	□□□□□ -0.78
CLTCL1-205	ENST00000538828	IRGM	A1A4Y4	181 aa		10.19	□□□□□ -0.78
CLTCL1-205	ENST00000538828	NKX6-3	A6NJ46	265 aa		10.19	□□□□□ -0.78
CLTCL1-205	ENST00000538828	OR2AT4	A6NND4	320 aa		10.19	□□□□□ -0.78
CLTCL1-205	ENST00000538828	NDUFB3	O43676	98 aa		10.19	□□□□□ -0.78
CLTCL1-205	ENST00000538828	RPP14	O95059	124 aa	Known RBP	10.19	□□□□□ -0.78
CLTCL1-205	ENST00000538828	ALX3	O95076	343 aa		10.19	□□□□□ -0.78
CLTCL1-205	ENST00000538828	BAG2	O95816	211 aa		10.19	□□□□□ -0.78
CLTCL1-205	ENST00000538828	PGA5	P0DJD9	388 aa		10.19	□□□□□ -0.78
CLTCL1-205	ENST00000538828	MMP9	P14780	707 aa		10.19	□□□□□ -0.78
CLTCL1-205	ENST00000538828	AMY2B	P19961	511 aa		10.19	□□□□□ -0.78
CLTCL1-205	ENST00000538828	COMP	P49747	757 aa	Predicted RBP	10.19	□□□□□ -0.78
CLTCL1-205	ENST00000538828	FUT6	P51993	359 aa		10.19	□□□□□ -0.78
CLTCL1-205	ENST00000538828	IL13RA1	P78552	427 aa		10.19	□□□□□ -0.78
CLTCL1-205	ENST00000538828	ZNF91	Q05481	1191 aa		10.19	□□□□□ -0.78
CLTCL1-205	ENST00000538828	IL24	Q13007	206 aa		10.19	□□□□□ -0.78
CLTCL1-205	ENST00000538828	IL18R1	Q13478	541 aa		10.19	□□□□□ -0.78
CLTCL1-205	ENST00000538828	SMIM21	Q3B7S5	101 aa		10.19	□□□□□ -0.78
CLTCL1-205	ENST00000538828	CEP78	Q5JTW2	689 aa		10.19	□□□□□ -0.78
CLTCL1-205	ENST00000538828	RBMS3	Q6XE24	437 aa	Known RBP	10.19	□□□□□ -0.78
CLTCL1-205	ENST00000538828	BTN2A1	Q7KYR7	527 aa		10.19	□□□□□ -0.78
CLTCL1-205	ENST00000538828	PRSS35	Q8N3Z0	413 aa		10.19	□□□□□ -0.78
CLTCL1-205	ENST00000538828	TMIGD2	Q96BF3	282 aa		10.19	□□□□□ -0.78
CLTCL1-205	ENST00000538828	WDFY2	Q96P53	400 aa		10.19	□□□□□ -0.78
CLTCL1-205	ENST00000538828	CNTD2	Q9H8S5	307 aa		10.19	□□□□□ -0.78
CLTCL1-205	ENST00000538828	UNKL	Q9H9P5	680 aa	Known RBP	10.19	□□□□□ -0.78
CLTCL1-205	ENST00000538828	HES4	Q9HCC6	221 aa		10.19	□□□□□ -0.78
CLTCL1-205	ENST00000538828	ACOXL	Q9NUZ1	547 aa		10.19	□□□□□ -0.78
CLTCL1-205	ENST00000538828	GNG8	Q9UK08	70 aa		10.19	□□□□□ -0.78
CLTCL1-205	ENST00000538828	ZNF222	Q9UK12	451 aa		10.19	□□□□□ -0.78
CLTCL1-205	ENST00000538828	SLC7A11	Q9UPY5	501 aa		10.19	□□□□□ -0.78
CLTCL1-205	ENST00000538828	TRBV23-1	A0A0A0MS06	115 aa		10.18	□□□□□ -0.78
CLTCL1-205	ENST00000538828	LOC107986453	A0A1B0GWG9	222 aa		10.18	□□□□□ -0.78
CLTCL1-205	ENST00000538828	CASQ2	O14958	399 aa	Predicted RBP	10.18	□□□□□ -0.78
CLTCL1-205	ENST00000538828	AKR7A2	O43488	359 aa		10.18	□□□□□ -0.78
CLTCL1-205	ENST00000538828	FCN3	O75636	299 aa		10.18	□□□□□ -0.78
CLTCL1-205	ENST00000538828	APOL3	O95236	402 aa		10.18	□□□□□ -0.78
CLTCL1-205	ENST00000538828	MT-ND2	P03891	347 aa		10.18	□□□□□ -0.78
CLTCL1-205	ENST00000538828	HTR1A	P08908	422 aa		10.18	□□□□□ -0.78
CLTCL1-205	ENST00000538828	DCK	P27707	260 aa		10.18	□□□□□ -0.78
CLTCL1-205	ENST00000538828	HAAO	P46952	286 aa		10.18	□□□□□ -0.78
CLTCL1-205	ENST00000538828	FGF12	P61328	243 aa		10.18	□□□□□ -0.78
CLTCL1-205	ENST00000538828	ERVK11-1	P61568	191 aa		10.18	□□□□□ -0.78
CLTCL1-205	ENST00000538828	CNN3	Q15417	329 aa	Known RBP	10.18	□□□□□ -0.78

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