RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 TM2D1Q9BX74 207 aa21.72■■□□□ 1.07
RAB40C-204ENST00000538492 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP21.72■■□□□ 1.07
RAB40C-204ENST00000538492 MCTS1Q9ULC4 181 aaKnown RBP21.72■■□□□ 1.07
RAB40C-204ENST00000538492 CRHP06850 196 aa21.71■■□□□ 1.07
RAB40C-204ENST00000538492 CST2P09228 141 aa21.71■■□□□ 1.07
RAB40C-204ENST00000538492 ZP3P21754 424 aa21.71■■□□□ 1.07
RAB40C-204ENST00000538492 GLRA1P23415 457 aa21.71■■□□□ 1.07
RAB40C-204ENST00000538492 HTR5AP47898 357 aa21.71■■□□□ 1.07
RAB40C-204ENST00000538492 TMEM17Q86X19 198 aa21.71■■□□□ 1.07
RAB40C-204ENST00000538492 INO80EQ8NBZ0 244 aaPredicted RBP21.71■■□□□ 1.07
RAB40C-204ENST00000538492 GALNT11Q8NCW6 608 aa21.71■■□□□ 1.07
RAB40C-204ENST00000538492 FGFBP3Q8TAT2 258 aa21.71■■□□□ 1.07
RAB40C-204ENST00000538492 C10orf35Q96D05 121 aa21.71■■□□□ 1.07
RAB40C-204ENST00000538492 ADGRG7Q96K78 797 aa21.71■■□□□ 1.07
RAB40C-204ENST00000538492 PLEKHJ1Q9NW61 149 aa21.71■■□□□ 1.07
RAB40C-204ENST00000538492 IGKV1D-8A0A087WSZ0 117 aa21.71■■□□□ 1.07
RAB40C-204ENST00000538492 CEACAM18A8MTB9 384 aa21.71■■□□□ 1.07
RAB40C-204ENST00000538492 SERPINE3A8MV23 424 aa21.71■■□□□ 1.07
RAB40C-204ENST00000538492 FPR2P25090 351 aa21.71■■□□□ 1.07
RAB40C-204ENST00000538492 PSMB6P28072 239 aa21.71■■□□□ 1.07
RAB40C-204ENST00000538492 NUP62P37198 522 aaPredicted RBP21.71■■□□□ 1.07
RAB40C-204ENST00000538492 RFC3P40938 356 aa21.71■■□□□ 1.07
RAB40C-204ENST00000538492 TAS2R46P59540 309 aa21.71■■□□□ 1.07
RAB40C-204ENST00000538492 SUPT4H1P63272 117 aaKnown RBP21.71■■□□□ 1.07
RAB40C-204ENST00000538492 TUSC1Q2TAM9 212 aa21.71■■□□□ 1.07
RAB40C-204ENST00000538492 CHRFAM7AQ494W8 412 aa21.71■■□□□ 1.07
RAB40C-204ENST00000538492 LHFPL1Q86WI0 220 aa21.71■■□□□ 1.07
RAB40C-204ENST00000538492 CPT1CQ8TCG5 803 aa21.71■■□□□ 1.07
RAB40C-204ENST00000538492 FOXB1Q99853 325 aa21.71■■□□□ 1.07
RAB40C-204ENST00000538492 PPA2Q9H2U2 334 aa21.71■■□□□ 1.07
RAB40C-204ENST00000538492 MPTX1A8MV57 137 aa21.7■■□□□ 1.06
RAB40C-204ENST00000538492 SFT2D2O95562 160 aa21.7■■□□□ 1.06
RAB40C-204ENST00000538492 IGHV3-9P01782 118 aa21.7■■□□□ 1.06
RAB40C-204ENST00000538492 M6PRP20645 277 aa21.7■■□□□ 1.06
RAB40C-204ENST00000538492 SIGLEC14Q08ET2 396 aa21.7■■□□□ 1.06
RAB40C-204ENST00000538492 H3F3CQ6NXT2 135 aa21.7■■□□□ 1.06
RAB40C-204ENST00000538492 OR5AP2Q8NGF4 316 aa21.7■■□□□ 1.06
RAB40C-204ENST00000538492 NECAB3Q96P71 396 aaPredicted RBP21.7■■□□□ 1.06
RAB40C-204ENST00000538492 CDC6Q99741 560 aa21.7■■□□□ 1.06
RAB40C-204ENST00000538492 OSGIN2Q9Y236 505 aa21.7■■□□□ 1.06
RAB40C-204ENST00000538492 CSAG2Q9Y5P2 127 aa21.7■■□□□ 1.06
RAB40C-204ENST00000538492 SERPINA5P05154 406 aa21.7■■□□□ 1.06
RAB40C-204ENST00000538492 SERPINA7P05543 415 aa21.7■■□□□ 1.06
RAB40C-204ENST00000538492 PSG4Q00888 419 aa21.7■■□□□ 1.06
RAB40C-204ENST00000538492 SCRN3Q0VDG4 424 aa21.7■■□□□ 1.06
RAB40C-204ENST00000538492 PEG10Q86TG7 708 aaKnown RBP21.7■■□□□ 1.06
RAB40C-204ENST00000538492 PSMF1Q92530 271 aa21.7■■□□□ 1.06
RAB40C-204ENST00000538492 ZNF581Q9P0T4 197 aa21.7■■□□□ 1.06
RAB40C-204ENST00000538492 GPR160Q9UJ42 338 aa21.7■■□□□ 1.06
RAB40C-204ENST00000538492 GPR179Q6PRD1 2367 aa21.69■■□□□ 1.06
RAB40C-204ENST00000538492 IGKV1-27A0A075B6S5 117 aa21.69■■□□□ 1.06
RAB40C-204ENST00000538492 B8ZZF3 427 aa21.69■■□□□ 1.06
RAB40C-204ENST00000538492 ANKRD55Q3KP44 614 aa21.69■■□□□ 1.06
RAB40C-204ENST00000538492 PLXDC2Q6UX71 529 aa21.69■■□□□ 1.06
RAB40C-204ENST00000538492 FAM219AQ8IW50 185 aa21.69■■□□□ 1.06
RAB40C-204ENST00000538492 SLC38A6Q8IZM9 456 aa21.69■■□□□ 1.06
RAB40C-204ENST00000538492 THOC3Q96J01 351 aaKnown RBP21.69■■□□□ 1.06
RAB40C-204ENST00000538492 SLC25A32Q9H2D1 315 aa21.69■■□□□ 1.06
RAB40C-204ENST00000538492 ARRDC1-AS1Q9H2J1 176 aa21.69■■□□□ 1.06
RAB40C-204ENST00000538492 A8MXK9 166 aa21.69■■□□□ 1.06
RAB40C-204ENST00000538492 ABLIM2Q6H8Q1 611 aa21.69■■□□□ 1.06
RAB40C-204ENST00000538492 UNQ6126/PRO20091Q6UXV3 157 aa21.69■■□□□ 1.06
RAB40C-204ENST00000538492 PXT1Q8NFP0 134 aa21.69■■□□□ 1.06
RAB40C-204ENST00000538492 RASL12Q9NYN1 266 aa21.69■■□□□ 1.06
RAB40C-204ENST00000538492 NCOR1O75376 2440 aa21.68■■□□□ 1.06
RAB40C-204ENST00000538492 F5H0A9 414 aaPredicted RBP21.68■■□□□ 1.06
RAB40C-204ENST00000538492 FGF2P09038 288 aa21.68■■□□□ 1.06
RAB40C-204ENST00000538492 JMJD7P0C870 316 aa21.68■■□□□ 1.06
RAB40C-204ENST00000538492 OVCH2Q7RTZ1 564 aa21.68■■□□□ 1.06
RAB40C-204ENST00000538492 BVESQ8NE79 360 aa21.68■■□□□ 1.06
RAB40C-204ENST00000538492 DCUN1D4Q92564 292 aa21.68■■□□□ 1.06
RAB40C-204ENST00000538492 Q96M66 194 aa21.68■■□□□ 1.06
RAB40C-204ENST00000538492 OR6C6A6NF89 314 aa21.68■■□□□ 1.06
RAB40C-204ENST00000538492 KNG1P01042 644 aa21.68■■□□□ 1.06
RAB40C-204ENST00000538492 CSTBP04080 98 aaKnown RBP21.68■■□□□ 1.06
RAB40C-204ENST00000538492 PGAM2P15259 253 aa21.68■■□□□ 1.06
RAB40C-204ENST00000538492 RSU1Q15404 277 aa21.68■■□□□ 1.06
RAB40C-204ENST00000538492 TAF9Q16594 264 aa21.68■■□□□ 1.06
RAB40C-204ENST00000538492 SULF2Q8IWU5 870 aa21.68■■□□□ 1.06
RAB40C-204ENST00000538492 SCGB3A2Q96PL1 93 aa21.68■■□□□ 1.06
RAB40C-204ENST00000538492 LRFN1Q9P244 771 aa21.68■■□□□ 1.06
RAB40C-204ENST00000538492 SPEF1Q9Y4P9 236 aa21.68■■□□□ 1.06
RAB40C-204ENST00000538492 NMES1Q9C002 83 aa21.67■■□□□ 1.06
RAB40C-204ENST00000538492 DHRS7CA6NNS2 312 aa21.67■■□□□ 1.06
RAB40C-204ENST00000538492 MPLP40238 635 aa21.67■■□□□ 1.06
RAB40C-204ENST00000538492 BHLHE23Q8NDY6 225 aa21.67■■□□□ 1.06
RAB40C-204ENST00000538492 CCDC54Q8NEL0 328 aa21.67■■□□□ 1.06
RAB40C-204ENST00000538492 SPSB1Q96BD6 273 aa21.67■■□□□ 1.06
RAB40C-204ENST00000538492 FAAP24Q9BTP7 215 aa21.67■■□□□ 1.06
RAB40C-204ENST00000538492 METTL9Q9H1A3 318 aa21.67■■□□□ 1.06
RAB40C-204ENST00000538492 WNT5BQ9H1J7 359 aa21.67■■□□□ 1.06
RAB40C-204ENST00000538492 GPR35Q9HC97 309 aa21.67■■□□□ 1.06
RAB40C-204ENST00000538492 TIMM10BQ9Y5J6 103 aa21.67■■□□□ 1.06
RAB40C-204ENST00000538492 FIGNL2A6NMB9 653 aa21.66■■□□□ 1.06
RAB40C-204ENST00000538492 SRYQ05066 204 aa21.66■■□□□ 1.06
RAB40C-204ENST00000538492 FOXO1Q12778 655 aa21.66■■□□□ 1.06
RAB40C-204ENST00000538492 SKA3Q8IX90 412 aa21.66■■□□□ 1.06
RAB40C-204ENST00000538492 STRADBQ9C0K7 418 aa21.66■■□□□ 1.06
RAB40C-204ENST00000538492 OR2H1Q9GZK4 316 aa21.66■■□□□ 1.06
RAB40C-204ENST00000538492 GFRA1P56159 465 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms