RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 Q6ZSR3 168 aa12.52□□□□□ -0.4
USP44-203ENST00000537435 SVBPQ8N300 66 aa12.52□□□□□ -0.4
USP44-203ENST00000537435 FBXO17Q96EF6 278 aa12.52□□□□□ -0.4
USP44-203ENST00000537435 HDHD3Q9BSH5 251 aaPredicted RBP12.52□□□□□ -0.4
USP44-203ENST00000537435 SLC5A7Q9GZV3 580 aa12.52□□□□□ -0.4
USP44-203ENST00000537435 PCDHB16Q9NRJ7 776 aa12.52□□□□□ -0.4
USP44-203ENST00000537435 ZNF629Q9UEG4 869 aaPredicted RBP12.52□□□□□ -0.4
USP44-203ENST00000537435 NXT1Q9UKK6 140 aaKnown RBP12.52□□□□□ -0.4
USP44-203ENST00000537435 PTRH2Q9Y3E5 179 aaKnown RBP12.52□□□□□ -0.4
USP44-203ENST00000537435 PCDHGA1Q9Y5H4 931 aa12.52□□□□□ -0.4
USP44-203ENST00000537435 PMS2P1A4D2B8 440 aa12.52□□□□□ -0.41
USP44-203ENST00000537435 DHRS7CA6NNS2 312 aa12.52□□□□□ -0.41
USP44-203ENST00000537435 ZNF705EA8MWA4 302 aaPredicted RBP12.52□□□□□ -0.41
USP44-203ENST00000537435 TNFSF11O14788 317 aa12.52□□□□□ -0.41
USP44-203ENST00000537435 FGF5P12034 268 aa12.52□□□□□ -0.41
USP44-203ENST00000537435 FOXRED2Q8IWF2 684 aa12.52□□□□□ -0.41
USP44-203ENST00000537435 MAML2Q8IZL2 1156 aaPredicted RBP12.52□□□□□ -0.41
USP44-203ENST00000537435 SEMA6DQ8NFY4 1073 aa12.52□□□□□ -0.41
USP44-203ENST00000537435 OR4A4PQ8NGN8 299 aa12.52□□□□□ -0.41
USP44-203ENST00000537435 WNT2BQ93097 391 aa12.52□□□□□ -0.41
USP44-203ENST00000537435 ZNF775Q96BV0 537 aaPredicted RBP12.52□□□□□ -0.41
USP44-203ENST00000537435 IMMP1LQ96LU5 166 aa12.52□□□□□ -0.41
USP44-203ENST00000537435 ZNF2Q9BSG1 426 aaPredicted RBP12.52□□□□□ -0.41
USP44-203ENST00000537435 DNAJB11Q9UBS4 358 aa12.52□□□□□ -0.41
USP44-203ENST00000537435 FOXD3Q9UJU5 478 aaPredicted RBP12.52□□□□□ -0.41
USP44-203ENST00000537435 PURGQ9UJV8 347 aaKnown RBP12.52□□□□□ -0.41
USP44-203ENST00000537435 CA11O75493 328 aa12.51□□□□□ -0.41
USP44-203ENST00000537435 IFNA2P01563 188 aa12.51□□□□□ -0.41
USP44-203ENST00000537435 APOC1P02654 83 aa12.51□□□□□ -0.41
USP44-203ENST00000537435 TMEM225BP0DP42 221 aa12.51□□□□□ -0.41
USP44-203ENST00000537435 COX6A1P12074 109 aa12.51□□□□□ -0.41
USP44-203ENST00000537435 RBMXP38159 391 aaKnown RBP12.51□□□□□ -0.41
USP44-203ENST00000537435 ZNF84P51523 738 aa12.51□□□□□ -0.41
USP44-203ENST00000537435 HLA-BQ31612 363 aa12.51□□□□□ -0.41
USP44-203ENST00000537435 RTL6Q6ICC9 239 aa12.51□□□□□ -0.41
USP44-203ENST00000537435 ZIC4Q8N9L1 334 aa12.51□□□□□ -0.41
USP44-203ENST00000537435 MR1Q95460 341 aa12.51□□□□□ -0.41
USP44-203ENST00000537435 SPTSSAQ969W0 71 aa12.51□□□□□ -0.41
USP44-203ENST00000537435 SGK3Q96BR1 496 aa12.51□□□□□ -0.41
USP44-203ENST00000537435 C10orf35Q96D05 121 aa12.51□□□□□ -0.41
USP44-203ENST00000537435 ADAT1Q9BUB4 502 aaKnown RBP12.51□□□□□ -0.41
USP44-203ENST00000537435 MMP26Q9NRE1 261 aa12.51□□□□□ -0.41
USP44-203ENST00000537435 MEMO1Q9Y316 297 aa12.51□□□□□ -0.41
USP44-203ENST00000537435 CFAP54Q96N23 3096 aa12.51□□□□□ -0.41
USP44-203ENST00000537435 A0A0J9YW62 118 aa12.51□□□□□ -0.41
USP44-203ENST00000537435 F8W036 122 aa12.51□□□□□ -0.41
USP44-203ENST00000537435 SSR4P51571 173 aa12.51□□□□□ -0.41
USP44-203ENST00000537435 MTCP1P56278 107 aa12.51□□□□□ -0.41
USP44-203ENST00000537435 BLOC1S1P78537 153 aa12.51□□□□□ -0.41
USP44-203ENST00000537435 RBM39Q14498 530 aaKnown RBP12.51□□□□□ -0.41
USP44-203ENST00000537435 PPA1Q15181 289 aa12.51□□□□□ -0.41
USP44-203ENST00000537435 MST1LQ2TV78 715 aa12.51□□□□□ -0.41
USP44-203ENST00000537435 LDLRAD3Q86YD5 345 aa12.51□□□□□ -0.41
USP44-203ENST00000537435 OR5T2Q8NGG2 359 aa12.51□□□□□ -0.41
USP44-203ENST00000537435 OR2AE1Q8NHA4 323 aa12.51□□□□□ -0.41
USP44-203ENST00000537435 ADAMTS17Q8TE56 1095 aa12.51□□□□□ -0.41
USP44-203ENST00000537435 Q96M66 194 aa12.51□□□□□ -0.41
USP44-203ENST00000537435 CNTNAP3BQ96NU0 1288 aa12.51□□□□□ -0.41
USP44-203ENST00000537435 TMEM231Q9H6L2 316 aa12.51□□□□□ -0.41
USP44-203ENST00000537435 C1orf123Q9NWV4 160 aa12.51□□□□□ -0.41
USP44-203ENST00000537435 NUDT19A8MXV4 375 aa12.5□□□□□ -0.41
USP44-203ENST00000537435 ANGPTL7O43827 346 aa12.5□□□□□ -0.41
USP44-203ENST00000537435 KLK3P07288 261 aaPredicted RBP12.5□□□□□ -0.41
USP44-203ENST00000537435 ACKR3P25106 362 aa12.5□□□□□ -0.41
USP44-203ENST00000537435 SCRN3Q0VDG4 424 aa12.5□□□□□ -0.41
USP44-203ENST00000537435 CHAF1BQ13112 559 aa12.5□□□□□ -0.41
USP44-203ENST00000537435 EXT1Q16394 746 aa12.5□□□□□ -0.41
USP44-203ENST00000537435 TMEM88Q6PEY1 159 aa12.5□□□□□ -0.41
USP44-203ENST00000537435 TMEM156Q8N614 296 aa12.5□□□□□ -0.41
USP44-203ENST00000537435 IFI44Q8TCB0 444 aa12.5□□□□□ -0.41
USP44-203ENST00000537435 NAT6Q93015 286 aa12.5□□□□□ -0.41
USP44-203ENST00000537435 SRXN1Q9BYN0 137 aa12.5□□□□□ -0.41
USP44-203ENST00000537435 ZNF700Q9H0M5 742 aa12.5□□□□□ -0.41
USP44-203ENST00000537435 TREM1Q9NP99 234 aa12.5□□□□□ -0.41
USP44-203ENST00000537435 LPAR3Q9UBY5 353 aa12.5□□□□□ -0.41
USP44-203ENST00000537435 HS3ST3B1Q9Y662 390 aa12.5□□□□□ -0.41
USP44-203ENST00000537435 MSTNO14793 375 aa12.5□□□□□ -0.41
USP44-203ENST00000537435 SUCLG1P53597 346 aaKnown RBP12.5□□□□□ -0.41
USP44-203ENST00000537435 PJVKQ0ZLH3 352 aa12.5□□□□□ -0.41
USP44-203ENST00000537435 IL11RAQ14626 422 aa12.5□□□□□ -0.41
USP44-203ENST00000537435 IAH1Q2TAA2 248 aaPredicted RBP12.5□□□□□ -0.41
USP44-203ENST00000537435 RPL7L1Q6DKI1 246 aaKnown RBP12.5□□□□□ -0.41
USP44-203ENST00000537435 RPUSD3Q6P087 351 aaKnown RBP12.5□□□□□ -0.41
USP44-203ENST00000537435 SULF2Q8IWU5 870 aa12.5□□□□□ -0.41
USP44-203ENST00000537435 CCDC54Q8NEL0 328 aa12.5□□□□□ -0.41
USP44-203ENST00000537435 INTS12Q96CB8 462 aaKnown RBP12.5□□□□□ -0.41
USP44-203ENST00000537435 HRH4Q9H3N8 390 aa12.5□□□□□ -0.41
USP44-203ENST00000537435 MASP2O00187 686 aa12.49□□□□□ -0.41
USP44-203ENST00000537435 RRP8O43159 456 aaKnown RBP12.49□□□□□ -0.41
USP44-203ENST00000537435 SPRY1O43609 319 aaPredicted RBP12.49□□□□□ -0.41
USP44-203ENST00000537435 KLF7O75840 302 aaPredicted RBP12.49□□□□□ -0.41
USP44-203ENST00000537435 HKR1P10072 659 aa12.49□□□□□ -0.41
USP44-203ENST00000537435 ZNF708P17019 499 aa12.49□□□□□ -0.41
USP44-203ENST00000537435 ECI1P42126 302 aa12.49□□□□□ -0.41
USP44-203ENST00000537435 PRSS12P56730 875 aa12.49□□□□□ -0.41
USP44-203ENST00000537435 RAC1P63000 192 aa12.49□□□□□ -0.41
USP44-203ENST00000537435 MRPS34P82930 218 aaKnown RBP12.49□□□□□ -0.41
USP44-203ENST00000537435 TAF9Q16594 264 aa12.49□□□□□ -0.41
USP44-203ENST00000537435 FAM27BQ5VT28 67 aa12.49□□□□□ -0.41
USP44-203ENST00000537435 IL34Q6ZMJ4 242 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms