RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 KIR2DS3K7RE56 304 aa9.67□□□□□ -0.86
CLSTN3-207ENST00000537408 OR2J2O76002 312 aa9.67□□□□□ -0.86
CLSTN3-207ENST00000537408 KIR2DS5Q14953 304 aa9.67□□□□□ -0.86
CLSTN3-207ENST00000537408 SGPP2Q8IWX5 399 aa9.67□□□□□ -0.86
CLSTN3-207ENST00000537408 AGBL5Q8NDL9 886 aa9.67□□□□□ -0.86
CLSTN3-207ENST00000537408 SLC41A2Q96JW4 573 aa9.67□□□□□ -0.86
CLSTN3-207ENST00000537408 GINS3Q9BRX5 216 aa9.67□□□□□ -0.86
CLSTN3-207ENST00000537408 VAMP8Q9BV40 100 aa9.67□□□□□ -0.86
CLSTN3-207ENST00000537408 SLC26A1Q9H2B4 701 aa9.67□□□□□ -0.86
CLSTN3-207ENST00000537408 Q9N2J8 555 aa9.67□□□□□ -0.86
CLSTN3-207ENST00000537408 LSM5Q9Y4Y9 91 aaKnown RBP9.67□□□□□ -0.86
CLSTN3-207ENST00000537408 TRBV24-1A0A075B6N3 115 aa9.67□□□□□ -0.86
CLSTN3-207ENST00000537408 A0A0U1RQV5 110 aa9.67□□□□□ -0.86
CLSTN3-207ENST00000537408 TMEM212A6NML5 194 aa9.67□□□□□ -0.86
CLSTN3-207ENST00000537408 TNFRSF10CO14798 259 aa9.67□□□□□ -0.86
CLSTN3-207ENST00000537408 HMGN2P05204 90 aaKnown RBP9.67□□□□□ -0.86
CLSTN3-207ENST00000537408 FUT1P19526 365 aa9.67□□□□□ -0.86
CLSTN3-207ENST00000537408 KLK2P20151 261 aa9.67□□□□□ -0.86
CLSTN3-207ENST00000537408 GRPRP30550 384 aa9.67□□□□□ -0.86
CLSTN3-207ENST00000537408 RBMXP38159 391 aaKnown RBP9.67□□□□□ -0.86
CLSTN3-207ENST00000537408 NBL1P41271 181 aa9.67□□□□□ -0.86
CLSTN3-207ENST00000537408 OR3A2P47893 321 aa9.67□□□□□ -0.86
CLSTN3-207ENST00000537408 HHEXQ03014 270 aa9.67□□□□□ -0.86
CLSTN3-207ENST00000537408 COL10A1Q03692 680 aa9.67□□□□□ -0.86
CLSTN3-207ENST00000537408 GGTLC2Q14390 218 aa9.67□□□□□ -0.86
CLSTN3-207ENST00000537408 TMEM52BQ4KMG9 183 aa9.67□□□□□ -0.86
CLSTN3-207ENST00000537408 TOMM20LQ6UXN7 152 aa9.67□□□□□ -0.86
CLSTN3-207ENST00000537408 TMEM182Q6ZP80 229 aaPredicted RBP9.67□□□□□ -0.86
CLSTN3-207ENST00000537408 ADGRE4PQ86SQ3 457 aa9.67□□□□□ -0.86
CLSTN3-207ENST00000537408 NKAIN3Q8N8D7 197 aa9.67□□□□□ -0.86
CLSTN3-207ENST00000537408 PFN4Q8NHR9 129 aa9.67□□□□□ -0.86
CLSTN3-207ENST00000537408 MARCH1Q8TCQ1 289 aa9.67□□□□□ -0.86
CLSTN3-207ENST00000537408 CDS1Q92903 461 aa9.67□□□□□ -0.86
CLSTN3-207ENST00000537408 SMIM12Q96EX1 92 aa9.67□□□□□ -0.86
CLSTN3-207ENST00000537408 MS4A10Q96PG2 267 aa9.67□□□□□ -0.86
CLSTN3-207ENST00000537408 CTDSP1Q9GZU7 261 aa9.67□□□□□ -0.86
CLSTN3-207ENST00000537408 SERTAD3Q9UJW9 196 aa9.67□□□□□ -0.86
CLSTN3-207ENST00000537408 NUDT21O43809 227 aaKnown RBP9.67□□□□□ -0.86
CLSTN3-207ENST00000537408 SCGB1D2O95969 90 aa9.67□□□□□ -0.86
CLSTN3-207ENST00000537408 S100A7P31151 101 aa9.67□□□□□ -0.86
CLSTN3-207ENST00000537408 KLHDC8AQ8IYD2 350 aa9.67□□□□□ -0.86
CLSTN3-207ENST00000537408 Q8NFD4 153 aa9.67□□□□□ -0.86
CLSTN3-207ENST00000537408 NKD1Q969G9 470 aa9.67□□□□□ -0.86
CLSTN3-207ENST00000537408 ALKBH3Q96Q83 286 aaPredicted RBP9.67□□□□□ -0.86
CLSTN3-207ENST00000537408 RARRES2Q99969 163 aa9.67□□□□□ -0.86
CLSTN3-207ENST00000537408 PIKFYVEQ9Y2I7 2098 aa9.67□□□□□ -0.86
CLSTN3-207ENST00000537408 NPIPA2E9PIF3 369 aa9.66□□□□□ -0.86
CLSTN3-207ENST00000537408 NDUFS4O43181 175 aa9.66□□□□□ -0.86
CLSTN3-207ENST00000537408 B4GALT2O60909 372 aa9.66□□□□□ -0.86
CLSTN3-207ENST00000537408 OR6A2O95222 327 aa9.66□□□□□ -0.86
CLSTN3-207ENST00000537408 FUT3P21217 361 aa9.66□□□□□ -0.86
CLSTN3-207ENST00000537408 UBE2G2P60604 165 aa9.66□□□□□ -0.86
CLSTN3-207ENST00000537408 THSD4Q6ZMP0 1018 aa9.66□□□□□ -0.86
CLSTN3-207ENST00000537408 ZNF765Q7L2R6 523 aa9.66□□□□□ -0.86
CLSTN3-207ENST00000537408 ZNF738Q8NE65 137 aa9.66□□□□□ -0.86
CLSTN3-207ENST00000537408 FNDC9Q8TBE3 224 aa9.66□□□□□ -0.86
CLSTN3-207ENST00000537408 ZNF552Q9H707 407 aaPredicted RBP9.66□□□□□ -0.86
CLSTN3-207ENST00000537408 HRASLS2Q9NWW9 162 aa9.66□□□□□ -0.86
CLSTN3-207ENST00000537408 LRIT1Q9P2V4 623 aa9.66□□□□□ -0.86
CLSTN3-207ENST00000537408 KLK13Q9UKR3 277 aa9.66□□□□□ -0.86
CLSTN3-207ENST00000537408 ZNF443Q9Y2A4 671 aaPredicted RBP9.66□□□□□ -0.86
CLSTN3-207ENST00000537408 CACNA1IQ9P0X4 2223 aa9.66□□□□□ -0.86
CLSTN3-207ENST00000537408 TRBV5-5A0A0J9YX44 114 aa9.66□□□□□ -0.86
CLSTN3-207ENST00000537408 ZNF860A6NHJ4 632 aa9.66□□□□□ -0.86
CLSTN3-207ENST00000537408 OR4C45A6NMZ5 311 aa9.66□□□□□ -0.86
CLSTN3-207ENST00000537408 HSD17B6O14756 317 aa9.66□□□□□ -0.86
CLSTN3-207ENST00000537408 HLA-DQA2P01906 255 aa9.66□□□□□ -0.86
CLSTN3-207ENST00000537408 TDGF1P13385 188 aa9.66□□□□□ -0.86
CLSTN3-207ENST00000537408 TFPI2P48307 235 aa9.66□□□□□ -0.86
CLSTN3-207ENST00000537408 CLDN6P56747 220 aa9.66□□□□□ -0.86
CLSTN3-207ENST00000537408 UBE2V1Q13404 147 aa9.66□□□□□ -0.86
CLSTN3-207ENST00000537408 MLC1Q15049 377 aa9.66□□□□□ -0.86
CLSTN3-207ENST00000537408 IAH1Q2TAA2 248 aaPredicted RBP9.66□□□□□ -0.86
CLSTN3-207ENST00000537408 ALG10BQ5I7T1 473 aa9.66□□□□□ -0.86
CLSTN3-207ENST00000537408 COA6Q5JTJ3 125 aaKnown RBP9.66□□□□□ -0.86
CLSTN3-207ENST00000537408 FAM219AQ8IW50 185 aa9.66□□□□□ -0.86
CLSTN3-207ENST00000537408 GBGT1Q8N5D6 347 aa9.66□□□□□ -0.86
CLSTN3-207ENST00000537408 EXD3Q8N9H8 876 aa9.66□□□□□ -0.86
CLSTN3-207ENST00000537408 POC1AQ8NBT0 407 aa9.66□□□□□ -0.86
CLSTN3-207ENST00000537408 C20orf144Q9BQM9 153 aa9.66□□□□□ -0.86
CLSTN3-207ENST00000537408 TMEM242Q9NWH2 141 aa9.66□□□□□ -0.86
CLSTN3-207ENST00000537408 SIGLEC7Q9Y286 467 aa9.66□□□□□ -0.86
CLSTN3-207ENST00000537408 F6UZH7 168 aa9.66□□□□□ -0.86
CLSTN3-207ENST00000537408 HSPB1P04792 205 aaKnown RBP9.66□□□□□ -0.86
CLSTN3-207ENST00000537408 HRH1P35367 487 aa9.66□□□□□ -0.86
CLSTN3-207ENST00000537408 NANOS3P60323 173 aaKnown RBP9.66□□□□□ -0.86
CLSTN3-207ENST00000537408 OR51A2Q8NGJ7 313 aa9.66□□□□□ -0.86
CLSTN3-207ENST00000537408 OR1L6Q8NGR2 347 aa9.66□□□□□ -0.86
CLSTN3-207ENST00000537408 TSLPQ969D9 159 aa9.66□□□□□ -0.86
CLSTN3-207ENST00000537408 CIB3Q96Q77 187 aaPredicted RBP9.66□□□□□ -0.86
CLSTN3-207ENST00000537408 CNTD2Q9H8S5 307 aa9.66□□□□□ -0.86
CLSTN3-207ENST00000537408 ZMAT3Q9HA38 289 aaKnown RBP9.66□□□□□ -0.86
CLSTN3-207ENST00000537408 CDH20Q9HBT6 801 aa9.66□□□□□ -0.86
CLSTN3-207ENST00000537408 PLSCR2Q9NRY7 297 aa9.66□□□□□ -0.86
CLSTN3-207ENST00000537408 TRAV8-7A0A075B6U6 113 aa9.65□□□□□ -0.86
CLSTN3-207ENST00000537408 DOK2O60496 412 aa9.65□□□□□ -0.86
CLSTN3-207ENST00000537408 SRP19P09132 144 aaKnown RBP9.65□□□□□ -0.86
CLSTN3-207ENST00000537408 PPP1CCP36873 323 aaKnown RBP9.65□□□□□ -0.86
CLSTN3-207ENST00000537408 PDX1P52945 283 aa9.65□□□□□ -0.86
CLSTN3-207ENST00000537408 PRPS1P60891 318 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms