RNA–Protein interactions for RNA: ENST00000536545.5

HMGA2-206, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-206ENST00000536545 ATP1B3P54709 279 aa19.6■□□□□ 0.73
HMGA2-206ENST00000536545 Q6ZS92 163 aa19.6■□□□□ 0.73
HMGA2-206ENST00000536545 SPICQ8N5J4 248 aa19.6■□□□□ 0.73
HMGA2-206ENST00000536545 OR52B4Q8NGK2 314 aa19.6■□□□□ 0.73
HMGA2-206ENST00000536545 ALX4Q9H161 411 aaPredicted RBP19.6■□□□□ 0.73
HMGA2-206ENST00000536545 POFUT1Q9H488 388 aa19.6■□□□□ 0.73
HMGA2-206ENST00000536545 OPA3Q9H6K4 179 aa19.6■□□□□ 0.73
HMGA2-206ENST00000536545 PLSCR3Q9NRY6 295 aa19.6■□□□□ 0.73
HMGA2-206ENST00000536545 IL36GQ9NZH8 169 aa19.6■□□□□ 0.73
HMGA2-206ENST00000536545 CRIM1Q9NZV1 1036 aa19.6■□□□□ 0.73
HMGA2-206ENST00000536545 GPR160Q9UJ42 338 aa19.6■□□□□ 0.73
HMGA2-206ENST00000536545 PLEKHA6Q9Y2H5 1048 aa19.6■□□□□ 0.73
HMGA2-206ENST00000536545 STARD10Q9Y365 291 aa19.6■□□□□ 0.73
HMGA2-206ENST00000536545 CUL9Q8IWT3 2517 aa19.59■□□□□ 0.73
HMGA2-206ENST00000536545 IGKV1-12A0A0C4DH73 117 aa19.59■□□□□ 0.73
HMGA2-206ENST00000536545 TMEM82A0PJX8 343 aa19.59■□□□□ 0.73
HMGA2-206ENST00000536545 RGS13O14921 159 aa19.59■□□□□ 0.73
HMGA2-206ENST00000536545 NGFP01138 241 aa19.59■□□□□ 0.73
HMGA2-206ENST00000536545 IGKV1D-12P01611 117 aa19.59■□□□□ 0.73
HMGA2-206ENST00000536545 HLXQ14774 488 aaPredicted RBP19.59■□□□□ 0.73
HMGA2-206ENST00000536545 RSU1Q15404 277 aa19.59■□□□□ 0.73
HMGA2-206ENST00000536545 NKPD1Q17RQ9 610 aa19.59■□□□□ 0.73
HMGA2-206ENST00000536545 PXT1Q8NFP0 134 aa19.59■□□□□ 0.73
HMGA2-206ENST00000536545 ZNF436Q9C0F3 470 aaPredicted RBP19.59■□□□□ 0.73
HMGA2-206ENST00000536545 ZNF850A8MQ14 1090 aa19.58■□□□□ 0.73
HMGA2-206ENST00000536545 SERPINE3A8MV23 424 aa19.58■□□□□ 0.73
HMGA2-206ENST00000536545 CA11O75493 328 aa19.58■□□□□ 0.73
HMGA2-206ENST00000536545 PLATP00750 562 aa19.58■□□□□ 0.73
HMGA2-206ENST00000536545 CSN2P05814 226 aa19.58■□□□□ 0.73
HMGA2-206ENST00000536545 KIR2DL2P43627 348 aaPredicted RBP19.58■□□□□ 0.73
HMGA2-206ENST00000536545 CBX5P45973 191 aa19.58■□□□□ 0.73
HMGA2-206ENST00000536545 ARL6IP1Q15041 203 aa19.58■□□□□ 0.73
HMGA2-206ENST00000536545 ATPAF1Q5TC12 328 aaPredicted RBP19.58■□□□□ 0.73
HMGA2-206ENST00000536545 SNIP1Q8TAD8 396 aaKnown RBP19.58■□□□□ 0.73
HMGA2-206ENST00000536545 MRGPRFQ96AM1 343 aa19.58■□□□□ 0.73
HMGA2-206ENST00000536545 HYLS1Q96M11 299 aa19.58■□□□□ 0.73
HMGA2-206ENST00000536545 MYOZ1Q9NP98 299 aaPredicted RBP19.58■□□□□ 0.73
HMGA2-206ENST00000536545 DLL4Q9NR61 685 aa19.58■□□□□ 0.73
HMGA2-206ENST00000536545 PRRC2CQ9Y520 2896 aaKnown RBP19.58■□□□□ 0.72
HMGA2-206ENST00000536545 DOCK7Q96N67 2140 aa19.58■□□□□ 0.72
HMGA2-206ENST00000536545 FAM172BPA6NC97 362 aa19.57■□□□□ 0.72
HMGA2-206ENST00000536545 ZNF780AO75290 641 aaPredicted RBP19.57■□□□□ 0.72
HMGA2-206ENST00000536545 HTR3BO95264 441 aa19.57■□□□□ 0.72
HMGA2-206ENST00000536545 CNOT4O95628 575 aaKnown RBP19.57■□□□□ 0.72
HMGA2-206ENST00000536545 CST4P01036 141 aa19.57■□□□□ 0.72
HMGA2-206ENST00000536545 PDZK1IP1Q13113 114 aa19.57■□□□□ 0.72
HMGA2-206ENST00000536545 SCGB2B2Q4G0G5 96 aa19.57■□□□□ 0.72
HMGA2-206ENST00000536545 Q6ZT83 130 aa19.57■□□□□ 0.72
HMGA2-206ENST00000536545 CD163Q86VB7 1156 aa19.57■□□□□ 0.72
HMGA2-206ENST00000536545 SLC30A7Q8NEW0 376 aa19.57■□□□□ 0.72
HMGA2-206ENST00000536545 FBXW5Q969U6 566 aa19.57■□□□□ 0.72
HMGA2-206ENST00000536545 PAPOLGQ9BWT3 736 aaKnown RBP19.57■□□□□ 0.72
HMGA2-206ENST00000536545 FGF23Q9GZV9 251 aaPredicted RBP19.57■□□□□ 0.72
HMGA2-206ENST00000536545 CHST6Q9GZX3 395 aa19.57■□□□□ 0.72
HMGA2-206ENST00000536545 MGAT4CQ9UBM8 478 aa19.57■□□□□ 0.72
HMGA2-206ENST00000536545 PQLC2LA1A4F0 135 aa19.57■□□□□ 0.72
HMGA2-206ENST00000536545 EIF2S3P41091 472 aaKnown RBP19.57■□□□□ 0.72
HMGA2-206ENST00000536545 TGFBR3Q03167 851 aa19.57■□□□□ 0.72
HMGA2-206ENST00000536545 ARFRP1Q13795 201 aa19.57■□□□□ 0.72
HMGA2-206ENST00000536545 ACTBL2Q562R1 376 aa19.57■□□□□ 0.72
HMGA2-206ENST00000536545 Q5BKY6 102 aa19.57■□□□□ 0.72
HMGA2-206ENST00000536545 RFPL4BQ6ZWI9 263 aa19.57■□□□□ 0.72
HMGA2-206ENST00000536545 CSNK2A3Q8NEV1 391 aa19.57■□□□□ 0.72
HMGA2-206ENST00000536545 OR6K3Q8NGY3 331 aa19.57■□□□□ 0.72
HMGA2-206ENST00000536545 OR4K15Q8NH41 348 aa19.57■□□□□ 0.72
HMGA2-206ENST00000536545 HPSE2Q8WWQ2 592 aa19.57■□□□□ 0.72
HMGA2-206ENST00000536545 CA10Q9NS85 328 aa19.57■□□□□ 0.72
HMGA2-206ENST00000536545 EIF3KQ9UBQ5 218 aaKnown RBP19.57■□□□□ 0.72
HMGA2-206ENST00000536545 UBE2QL1A1L167 161 aa19.56■□□□□ 0.72
HMGA2-206ENST00000536545 AHRRA9YTQ3 701 aa19.56■□□□□ 0.72
HMGA2-206ENST00000536545 CSTBP04080 98 aaKnown RBP19.56■□□□□ 0.72
HMGA2-206ENST00000536545 ZNF14P17017 642 aaPredicted RBP19.56■□□□□ 0.72
HMGA2-206ENST00000536545 GABRR1P24046 479 aa19.56■□□□□ 0.72
HMGA2-206ENST00000536545 CXADRP78310 365 aa19.56■□□□□ 0.72
HMGA2-206ENST00000536545 PRDX4Q13162 271 aa19.56■□□□□ 0.72
HMGA2-206ENST00000536545 MICBQ29980 383 aa19.56■□□□□ 0.72
HMGA2-206ENST00000536545 VAX1Q5SQQ9 334 aa19.56■□□□□ 0.72
HMGA2-206ENST00000536545 SIGIRRQ6IA17 410 aa19.56■□□□□ 0.72
HMGA2-206ENST00000536545 LAMTOR1Q6IAA8 161 aa19.56■□□□□ 0.72
HMGA2-206ENST00000536545 NLRC3Q7RTR2 1065 aa19.56■□□□□ 0.72
HMGA2-206ENST00000536545 CCDC107Q8WV48 283 aa19.56■□□□□ 0.72
HMGA2-206ENST00000536545 WBP1Q96G27 269 aa19.56■□□□□ 0.72
HMGA2-206ENST00000536545 RANBP3Q9H6Z4 567 aaPredicted RBP19.56■□□□□ 0.72
HMGA2-206ENST00000536545 FIGNL2A6NMB9 653 aa19.55■□□□□ 0.72
HMGA2-206ENST00000536545 COX5AP20674 150 aa19.55■□□□□ 0.72
HMGA2-206ENST00000536545 PPA1Q15181 289 aa19.55■□□□□ 0.72
HMGA2-206ENST00000536545 SF3B4Q15427 424 aaKnown RBP eCLIP19.55■□□□□ 0.72
HMGA2-206ENST00000536545 NSUN5P2Q63ZY6 315 aa19.55■□□□□ 0.72
HMGA2-206ENST00000536545 RTL6Q6ICC9 239 aa19.55■□□□□ 0.72
HMGA2-206ENST00000536545 OR2A2Q6IF42 318 aa19.55■□□□□ 0.72
HMGA2-206ENST00000536545 VWA1Q6PCB0 445 aa19.55■□□□□ 0.72
HMGA2-206ENST00000536545 HOGA1Q86XE5 327 aa19.55■□□□□ 0.72
HMGA2-206ENST00000536545 CCDC36Q8IYA8 594 aa19.55■□□□□ 0.72
HMGA2-206ENST00000536545 MUC20Q8N307 709 aaPredicted RBP19.55■□□□□ 0.72
HMGA2-206ENST00000536545 RBMXL3Q8N7X1 1067 aaKnown RBP19.55■□□□□ 0.72
HMGA2-206ENST00000536545 CNEP1R1Q8N9A8 125 aa19.55■□□□□ 0.72
HMGA2-206ENST00000536545 VSIG4Q9Y279 399 aa19.55■□□□□ 0.72
HMGA2-206ENST00000536545 PTPRZ1P23471 2315 aaPredicted RBP19.55■□□□□ 0.72
HMGA2-206ENST00000536545 LYZL6O75951 148 aa19.55■□□□□ 0.72
HMGA2-206ENST00000536545 PMP2P02689 132 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms