RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 RGCCQ9H4X1 137 aa6.94□□□□□ -1.3
COL21A1-212ENST00000535941 PARPBPQ9NWS1 579 aa6.94□□□□□ -1.3
COL21A1-212ENST00000535941 CBY1Q9Y3M2 126 aa6.94□□□□□ -1.3
COL21A1-212ENST00000535941 CHD3Q12873 2000 aaKnown RBP6.94□□□□□ -1.3
COL21A1-212ENST00000535941 MBD3L4A6NDZ8 208 aaPredicted RBP6.94□□□□□ -1.3
COL21A1-212ENST00000535941 MBD3L3A6NE82 208 aaPredicted RBP6.94□□□□□ -1.3
COL21A1-212ENST00000535941 A6NIN4 97 aa6.94□□□□□ -1.3
COL21A1-212ENST00000535941 MBD3L5A6NJ08 208 aaPredicted RBP6.94□□□□□ -1.3
COL21A1-212ENST00000535941 ARPC5O15511 151 aa6.94□□□□□ -1.3
COL21A1-212ENST00000535941 TXNL1O43396 289 aa6.94□□□□□ -1.3
COL21A1-212ENST00000535941 TRAPPC6AO75865 159 aa6.94□□□□□ -1.3
COL21A1-212ENST00000535941 NFYAP23511 347 aaPredicted RBP6.94□□□□□ -1.3
COL21A1-212ENST00000535941 CDK2P24941 298 aa6.94□□□□□ -1.3
COL21A1-212ENST00000535941 RFC3P40938 356 aa6.94□□□□□ -1.3
COL21A1-212ENST00000535941 TDGF1P3P51864 188 aa6.94□□□□□ -1.3
COL21A1-212ENST00000535941 CEACAM16Q2WEN9 425 aa6.94□□□□□ -1.3
COL21A1-212ENST00000535941 C2orf76Q3KRA6 126 aa6.94□□□□□ -1.3
COL21A1-212ENST00000535941 RBMS3Q6XE24 437 aaKnown RBP6.94□□□□□ -1.3
COL21A1-212ENST00000535941 TOMM5Q8N4H5 51 aa6.94□□□□□ -1.3
COL21A1-212ENST00000535941 OR1K1Q8NGR3 316 aa6.94□□□□□ -1.3
COL21A1-212ENST00000535941 MBD3L2Q8NHZ7 208 aaPredicted RBP6.94□□□□□ -1.3
COL21A1-212ENST00000535941 SYNPRQ8TBG9 265 aa6.94□□□□□ -1.3
COL21A1-212ENST00000535941 TM2D1Q9BX74 207 aa6.94□□□□□ -1.3
COL21A1-212ENST00000535941 SLITRK2Q9H156 845 aa6.94□□□□□ -1.3
COL21A1-212ENST00000535941 A0A0A6YYD4 124 aa6.94□□□□□ -1.3
COL21A1-212ENST00000535941 GGT3PA6NGU5 568 aa6.94□□□□□ -1.3
COL21A1-212ENST00000535941 J3QW42 95 aa6.94□□□□□ -1.3
COL21A1-212ENST00000535941 ACOT7O00154 380 aa6.94□□□□□ -1.3
COL21A1-212ENST00000535941 SRP9P49458 86 aaKnown RBP6.94□□□□□ -1.3
COL21A1-212ENST00000535941 TAS2R20P59543 309 aa6.94□□□□□ -1.3
COL21A1-212ENST00000535941 ARG2P78540 354 aa6.94□□□□□ -1.3
COL21A1-212ENST00000535941 DGCR2P98153 550 aa6.94□□□□□ -1.3
COL21A1-212ENST00000535941 GK2Q14410 553 aaPredicted RBP6.94□□□□□ -1.3
COL21A1-212ENST00000535941 CBLN2Q8IUK8 224 aa6.94□□□□□ -1.3
COL21A1-212ENST00000535941 UXS1Q8NBZ7 420 aa6.94□□□□□ -1.3
COL21A1-212ENST00000535941 FNDC9Q8TBE3 224 aa6.94□□□□□ -1.3
COL21A1-212ENST00000535941 OR51E1Q8TCB6 317 aa6.94□□□□□ -1.3
COL21A1-212ENST00000535941 GPX8Q8TED1 209 aa6.94□□□□□ -1.3
COL21A1-212ENST00000535941 C15orf40Q8WUR7 153 aa6.94□□□□□ -1.3
COL21A1-212ENST00000535941 MED12Q93074 2177 aa6.94□□□□□ -1.3
COL21A1-212ENST00000535941 RELTQ969Z4 430 aa6.94□□□□□ -1.3
COL21A1-212ENST00000535941 FAM3DQ96BQ1 224 aa6.94□□□□□ -1.3
COL21A1-212ENST00000535941 ALKBH3Q96Q83 286 aaPredicted RBP6.94□□□□□ -1.3
COL21A1-212ENST00000535941 CNTD2Q9H8S5 307 aa6.94□□□□□ -1.3
COL21A1-212ENST00000535941 MCTS1Q9ULC4 181 aaKnown RBP6.94□□□□□ -1.3
COL21A1-212ENST00000535941 MSRB2Q9Y3D2 182 aa6.94□□□□□ -1.3
COL21A1-212ENST00000535941 TIMM10BQ9Y5J6 103 aa6.94□□□□□ -1.3
COL21A1-212ENST00000535941 SULT1A3P0DMM9 295 aa6.93□□□□□ -1.3
COL21A1-212ENST00000535941 SULT1A4P0DMN0 295 aa6.93□□□□□ -1.3
COL21A1-212ENST00000535941 FCGR2AP12318 317 aa6.93□□□□□ -1.3
COL21A1-212ENST00000535941 ZNF32P17041 273 aa6.93□□□□□ -1.3
COL21A1-212ENST00000535941 NDUFB7P17568 137 aa6.93□□□□□ -1.3
COL21A1-212ENST00000535941 HTR2CP28335 458 aa6.93□□□□□ -1.3
COL21A1-212ENST00000535941 BDKRB2P30411 391 aa6.93□□□□□ -1.3
COL21A1-212ENST00000535941 SOX2P48431 317 aa6.93□□□□□ -1.3
COL21A1-212ENST00000535941 FOXG1P55316 489 aaPredicted RBP6.93□□□□□ -1.3
COL21A1-212ENST00000535941 RAB5BP61020 215 aa6.93□□□□□ -1.3
COL21A1-212ENST00000535941 PCBD1P61457 104 aa6.93□□□□□ -1.3
COL21A1-212ENST00000535941 SNTB1Q13884 538 aaKnown RBP6.93□□□□□ -1.3
COL21A1-212ENST00000535941 RAB11BQ15907 218 aa6.93□□□□□ -1.3
COL21A1-212ENST00000535941 ST3GAL2Q16842 350 aa6.93□□□□□ -1.3
COL21A1-212ENST00000535941 OR6N1Q8NGY5 312 aa6.93□□□□□ -1.3
COL21A1-212ENST00000535941 AKR7LQ8NHP1 331 aa6.93□□□□□ -1.3
COL21A1-212ENST00000535941 THAP6Q8TBB0 222 aa6.93□□□□□ -1.3
COL21A1-212ENST00000535941 PP6455Q8WZ26 134 aa6.93□□□□□ -1.3
COL21A1-212ENST00000535941 POM121L2Q96KW2 1035 aa6.93□□□□□ -1.3
COL21A1-212ENST00000535941 TMEM138Q9NPI0 162 aa6.93□□□□□ -1.3
COL21A1-212ENST00000535941 GPR84Q9NQS5 396 aa6.93□□□□□ -1.3
COL21A1-212ENST00000535941 IL36GQ9NZH8 169 aa6.93□□□□□ -1.3
COL21A1-212ENST00000535941 LHX6Q9UPM6 363 aa6.93□□□□□ -1.3
COL21A1-212ENST00000535941 TANC2Q9HCD6 1990 aa6.93□□□□□ -1.3
COL21A1-212ENST00000535941 LOC100509620A0A075B734 347 aa6.93□□□□□ -1.3
COL21A1-212ENST00000535941 M0R135 149 aa6.93□□□□□ -1.3
COL21A1-212ENST00000535941 DLL1O00548 723 aa6.93□□□□□ -1.3
COL21A1-212ENST00000535941 SPDEFO95238 335 aa6.93□□□□□ -1.3
COL21A1-212ENST00000535941 CD74P04233 296 aa6.93□□□□□ -1.3
COL21A1-212ENST00000535941 ZNF14P17017 642 aaPredicted RBP6.93□□□□□ -1.3
COL21A1-212ENST00000535941 ACKR3P25106 362 aa6.93□□□□□ -1.3
COL21A1-212ENST00000535941 S100A11P31949 105 aa6.93□□□□□ -1.3
COL21A1-212ENST00000535941 EIF2S3P41091 472 aaKnown RBP6.93□□□□□ -1.3
COL21A1-212ENST00000535941 CCR6P51684 374 aa6.93□□□□□ -1.3
COL21A1-212ENST00000535941 ART1P52961 327 aa6.93□□□□□ -1.3
COL21A1-212ENST00000535941 COTL1Q14019 142 aa6.93□□□□□ -1.3
COL21A1-212ENST00000535941 KLHL24Q6TFL4 600 aa6.93□□□□□ -1.3
COL21A1-212ENST00000535941 BOLLQ8N9W6 283 aaKnown RBP6.93□□□□□ -1.3
COL21A1-212ENST00000535941 C1orf162Q8NEQ5 155 aaPredicted RBP6.93□□□□□ -1.3
COL21A1-212ENST00000535941 OR52N4Q8NGI2 321 aa6.93□□□□□ -1.3
COL21A1-212ENST00000535941 TSEN15Q8WW01 171 aaKnown RBP6.93□□□□□ -1.3
COL21A1-212ENST00000535941 ZNF799Q96GE5 643 aa6.93□□□□□ -1.3
COL21A1-212ENST00000535941 UNKLQ9H9P5 680 aaKnown RBP6.93□□□□□ -1.3
COL21A1-212ENST00000535941 MGAT4CQ9UBM8 478 aa6.93□□□□□ -1.3
COL21A1-212ENST00000535941 FXYD6-FXYD2A0A087WZ82 144 aa6.92□□□□□ -1.3
COL21A1-212ENST00000535941 H7C417 338 aa6.92□□□□□ -1.3
COL21A1-212ENST00000535941 GPR31O00270 319 aa6.92□□□□□ -1.3
COL21A1-212ENST00000535941 MAS1P04201 325 aa6.92□□□□□ -1.3
COL21A1-212ENST00000535941 CXCL2P19875 107 aa6.92□□□□□ -1.3
COL21A1-212ENST00000535941 PMP22Q01453 160 aa6.92□□□□□ -1.3
COL21A1-212ENST00000535941 UBE2V2Q15819 145 aa6.92□□□□□ -1.3
COL21A1-212ENST00000535941 RSPO4Q2I0M5 234 aaPredicted RBP6.92□□□□□ -1.3
COL21A1-212ENST00000535941 ZNF260Q3ZCT1 412 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms