RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 PLPP5Q8NEB5 264 aa16.94■□□□□ 0.3
SMPD1-210ENST00000534405 LFNGQ8NES3 379 aa16.94■□□□□ 0.3
SMPD1-210ENST00000534405 MFSD8Q8NHS3 518 aa16.94■□□□□ 0.3
SMPD1-210ENST00000534405 ADAMTS18Q8TE60 1221 aa16.94■□□□□ 0.3
SMPD1-210ENST00000534405 OR10C1Q96KK4 312 aa16.94■□□□□ 0.3
SMPD1-210ENST00000534405 LANCL2Q9NS86 450 aa16.94■□□□□ 0.3
SMPD1-210ENST00000534405 SOHLH2Q9NX45 425 aa16.94■□□□□ 0.3
SMPD1-210ENST00000534405 OR52A1Q9UKL2 312 aa16.94■□□□□ 0.3
SMPD1-210ENST00000534405 V9GYS6 101 aa16.94■□□□□ 0.3
SMPD1-210ENST00000534405 TMEM212A6NML5 194 aa16.94■□□□□ 0.3
SMPD1-210ENST00000534405 A6NNC1 897 aa16.94■□□□□ 0.3
SMPD1-210ENST00000534405 ZNF264O43296 627 aa16.94■□□□□ 0.3
SMPD1-210ENST00000534405 CDC14BO60729 498 aa16.94■□□□□ 0.3
SMPD1-210ENST00000534405 SFT2D2O95562 160 aa16.94■□□□□ 0.3
SMPD1-210ENST00000534405 IL33O95760 270 aa16.94■□□□□ 0.3
SMPD1-210ENST00000534405 RPL12P30050 165 aaKnown RBP16.94■□□□□ 0.3
SMPD1-210ENST00000534405 OR3A1P47881 315 aa16.94■□□□□ 0.3
SMPD1-210ENST00000534405 RBX1P62877 108 aa16.94■□□□□ 0.3
SMPD1-210ENST00000534405 SMAD4Q13485 552 aaKnown RBP16.94■□□□□ 0.3
SMPD1-210ENST00000534405 CDC20BQ86Y33 519 aa16.94■□□□□ 0.3
SMPD1-210ENST00000534405 KDM8Q8N371 416 aa16.94■□□□□ 0.3
SMPD1-210ENST00000534405 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.94■□□□□ 0.3
SMPD1-210ENST00000534405 TSLPQ969D9 159 aa16.94■□□□□ 0.3
SMPD1-210ENST00000534405 SNX22Q96L94 193 aa16.94■□□□□ 0.3
SMPD1-210ENST00000534405 MRGPRX4Q96LA9 322 aa16.94■□□□□ 0.3
SMPD1-210ENST00000534405 SYT3Q9BQG1 590 aa16.94■□□□□ 0.3
SMPD1-210ENST00000534405 WDR76Q9H967 626 aa16.94■□□□□ 0.3
SMPD1-210ENST00000534405 SCDO00767 359 aa16.93■□□□□ 0.3
SMPD1-210ENST00000534405 OR5H8P0DN80 308 aa16.93■□□□□ 0.3
SMPD1-210ENST00000534405 FASLGP48023 281 aa16.93■□□□□ 0.3
SMPD1-210ENST00000534405 HOGA1Q86XE5 327 aa16.93■□□□□ 0.3
SMPD1-210ENST00000534405 TMEM104Q8NE00 496 aa16.93■□□□□ 0.3
SMPD1-210ENST00000534405 SNIP1Q8TAD8 396 aaKnown RBP16.93■□□□□ 0.3
SMPD1-210ENST00000534405 NEK7Q8TDX7 302 aa16.93■□□□□ 0.3
SMPD1-210ENST00000534405 AQP3Q92482 292 aa16.93■□□□□ 0.3
SMPD1-210ENST00000534405 THRSPQ92748 146 aa16.93■□□□□ 0.3
SMPD1-210ENST00000534405 TAAR8Q969N4 342 aa16.93■□□□□ 0.3
SMPD1-210ENST00000534405 FAM210BQ96KR6 192 aa16.93■□□□□ 0.3
SMPD1-210ENST00000534405 INTS14Q96SY0 518 aa16.93■□□□□ 0.3
SMPD1-210ENST00000534405 ADOQ96SZ5 270 aa16.93■□□□□ 0.3
SMPD1-210ENST00000534405 OR8D2Q9GZM6 311 aa16.93■□□□□ 0.3
SMPD1-210ENST00000534405 STRAPQ9Y3F4 350 aaKnown RBP16.93■□□□□ 0.3
SMPD1-210ENST00000534405 C2CD4DB7Z1M9 353 aa16.92■□□□□ 0.3
SMPD1-210ENST00000534405 ITGB1BP1O14713 200 aa16.92■□□□□ 0.3
SMPD1-210ENST00000534405 TK1P04183 234 aa16.92■□□□□ 0.3
SMPD1-210ENST00000534405 RPS2P15880 293 aaKnown RBP16.92■□□□□ 0.3
SMPD1-210ENST00000534405 PNLIPP16233 465 aa16.92■□□□□ 0.3
SMPD1-210ENST00000534405 EFNA3P52797 238 aa16.92■□□□□ 0.3
SMPD1-210ENST00000534405 ZNF774Q6NX45 483 aa16.92■□□□□ 0.3
SMPD1-210ENST00000534405 OR51B6Q9H340 312 aa16.92■□□□□ 0.3
SMPD1-210ENST00000534405 NCOR1P1Q9H4R4 102 aa16.92■□□□□ 0.3
SMPD1-210ENST00000534405 FITM1A5D6W6 292 aa16.92■□□□□ 0.3
SMPD1-210ENST00000534405 K7EPK0 472 aa16.92■□□□□ 0.3
SMPD1-210ENST00000534405 PGA4P0DJD7 388 aa16.92■□□□□ 0.3
SMPD1-210ENST00000534405 PGA5P0DJD9 388 aa16.92■□□□□ 0.3
SMPD1-210ENST00000534405 FCGR2CP31995 323 aa16.92■□□□□ 0.3
SMPD1-210ENST00000534405 OR1D4P47884 311 aa16.92■□□□□ 0.3
SMPD1-210ENST00000534405 S100A10P60903 97 aa16.92■□□□□ 0.3
SMPD1-210ENST00000534405 DLK1P80370 383 aa16.92■□□□□ 0.3
SMPD1-210ENST00000534405 SPEM2Q0P670 501 aa16.92■□□□□ 0.3
SMPD1-210ENST00000534405 C1QL3Q5VWW1 255 aa16.92■□□□□ 0.3
SMPD1-210ENST00000534405 FJX1Q86VR8 437 aa16.92■□□□□ 0.3
SMPD1-210ENST00000534405 FAM219AQ8IW50 185 aa16.92■□□□□ 0.3
SMPD1-210ENST00000534405 FAM71E2Q8N5Q1 922 aa16.92■□□□□ 0.3
SMPD1-210ENST00000534405 MARCH1Q8TCQ1 289 aa16.92■□□□□ 0.3
SMPD1-210ENST00000534405 ZNF587Q96SQ5 575 aaPredicted RBP16.92■□□□□ 0.3
SMPD1-210ENST00000534405 TPSD1Q9BZJ3 242 aa16.92■□□□□ 0.3
SMPD1-210ENST00000534405 MYOTQ9UBF9 498 aa16.92■□□□□ 0.3
SMPD1-210ENST00000534405 GRHPRQ9UBQ7 328 aa16.92■□□□□ 0.3
SMPD1-210ENST00000534405 CDC14CA4D256 554 aa16.91■□□□□ 0.3
SMPD1-210ENST00000534405 HSD17B6O14756 317 aa16.91■□□□□ 0.3
SMPD1-210ENST00000534405 TRA2AQ13595 282 aaKnown RBP eCLIP16.91■□□□□ 0.3
SMPD1-210ENST00000534405 HERPUD1Q15011 391 aa16.91■□□□□ 0.3
SMPD1-210ENST00000534405 FBXW9Q5XUX1 488 aa16.91■□□□□ 0.3
SMPD1-210ENST00000534405 CLEC18BQ6UXF7 455 aa16.91■□□□□ 0.3
SMPD1-210ENST00000534405 DPY19L4Q7Z388 723 aa16.91■□□□□ 0.3
SMPD1-210ENST00000534405 ZNF679Q8IYX0 411 aa16.91■□□□□ 0.3
SMPD1-210ENST00000534405 SMRP1Q8NCR6 262 aa16.91■□□□□ 0.3
SMPD1-210ENST00000534405 OR6N2Q8NGY6 317 aa16.91■□□□□ 0.3
SMPD1-210ENST00000534405 METTL21AQ8WXB1 218 aa16.91■□□□□ 0.3
SMPD1-210ENST00000534405 GAL3ST4Q96RP7 486 aa16.91■□□□□ 0.3
SMPD1-210ENST00000534405 AMELYQ99218 206 aa16.91■□□□□ 0.3
SMPD1-210ENST00000534405 GAB2Q9UQC2 676 aa16.91■□□□□ 0.3
SMPD1-210ENST00000534405 LAMA1P25391 3075 aa16.91■□□□□ 0.3
SMPD1-210ENST00000534405 LDLRAD4O15165 306 aa16.91■□□□□ 0.3
SMPD1-210ENST00000534405 HRH1P35367 487 aa16.91■□□□□ 0.3
SMPD1-210ENST00000534405 FHITP49789 147 aa16.91■□□□□ 0.3
SMPD1-210ENST00000534405 TMEM33P57088 247 aa16.91■□□□□ 0.3
SMPD1-210ENST00000534405 DMWDQ09019 674 aa16.91■□□□□ 0.3
SMPD1-210ENST00000534405 HAGHQ16775 308 aa16.91■□□□□ 0.3
SMPD1-210ENST00000534405 ADGRE4PQ86SQ3 457 aa16.91■□□□□ 0.3
SMPD1-210ENST00000534405 TRAPPC6BQ86SZ2 158 aa16.91■□□□□ 0.3
SMPD1-210ENST00000534405 SLC35G3Q8N808 338 aa16.91■□□□□ 0.3
SMPD1-210ENST00000534405 OR13C9Q8NGT0 318 aa16.91■□□□□ 0.3
SMPD1-210ENST00000534405 LMX1AQ8TE12 382 aa16.91■□□□□ 0.3
SMPD1-210ENST00000534405 TMEM230Q96A57 120 aa16.91■□□□□ 0.3
SMPD1-210ENST00000534405 THOC3Q96J01 351 aaKnown RBP16.91■□□□□ 0.3
SMPD1-210ENST00000534405 GAL3ST2Q9H3Q3 398 aa16.91■□□□□ 0.3
SMPD1-210ENST00000534405 IKZF2Q9UKS7 526 aa16.91■□□□□ 0.3
SMPD1-210ENST00000534405 GTF2A1LQ9UNN4 478 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms