RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 IKZF2Q9UKS7 526 aa7.32□□□□□ -1.24
COPB1-211ENST00000534234 COPS3Q9UNS2 423 aa7.32□□□□□ -1.24
COPB1-211ENST00000534234 MAB21L2Q9Y586 359 aa7.32□□□□□ -1.24
COPB1-211ENST00000534234 IGKV1D-17A0A075B6S4 117 aa7.31□□□□□ -1.24
COPB1-211ENST00000534234 A0A1W2PQ09 198 aa7.31□□□□□ -1.24
COPB1-211ENST00000534234 PRR32B1ATL7 298 aa7.31□□□□□ -1.24
COPB1-211ENST00000534234 RNASEK-C17orf49H0YIS7 233 aa7.31□□□□□ -1.24
COPB1-211ENST00000534234 DYNC1I1O14576 645 aa7.31□□□□□ -1.24
COPB1-211ENST00000534234 SIGLEC5O15389 551 aa7.31□□□□□ -1.24
COPB1-211ENST00000534234 FBP1P09467 338 aa7.31□□□□□ -1.24
COPB1-211ENST00000534234 PSG2P11465 335 aa7.31□□□□□ -1.24
COPB1-211ENST00000534234 FAHP16930 419 aa7.31□□□□□ -1.24
COPB1-211ENST00000534234 DLX1P56177 255 aa7.31□□□□□ -1.24
COPB1-211ENST00000534234 CAV3P56539 151 aa7.31□□□□□ -1.24
COPB1-211ENST00000534234 CXCR4P61073 352 aa7.31□□□□□ -1.24
COPB1-211ENST00000534234 ACTR3P61158 418 aa7.31□□□□□ -1.24
COPB1-211ENST00000534234 ZNF829Q3KNS6 432 aaPredicted RBP7.31□□□□□ -1.24
COPB1-211ENST00000534234 ZBTB37Q5TC79 503 aa7.31□□□□□ -1.24
COPB1-211ENST00000534234 HAGHLQ6PII5 290 aaPredicted RBP7.31□□□□□ -1.24
COPB1-211ENST00000534234 MEPCEQ7L2J0 689 aaKnown RBP7.31□□□□□ -1.24
COPB1-211ENST00000534234 BCDIN3DQ7Z5W3 292 aaKnown RBP7.31□□□□□ -1.24
COPB1-211ENST00000534234 TCEANCQ8N8B7 351 aa7.31□□□□□ -1.24
COPB1-211ENST00000534234 ZNRF1Q8ND25 227 aa7.31□□□□□ -1.24
COPB1-211ENST00000534234 OR5K1Q8NHB7 308 aa7.31□□□□□ -1.24
COPB1-211ENST00000534234 LINC01006Q8NI28 216 aa7.31□□□□□ -1.24
COPB1-211ENST00000534234 LRTOMTQ8WZ04 291 aa7.31□□□□□ -1.24
COPB1-211ENST00000534234 AQP3Q92482 292 aa7.31□□□□□ -1.24
COPB1-211ENST00000534234 TNFRSF14Q92956 283 aa7.31□□□□□ -1.24
COPB1-211ENST00000534234 DUS3LQ96G46 650 aaKnown RBP7.31□□□□□ -1.24
COPB1-211ENST00000534234 CNN2Q99439 309 aaKnown RBP7.31□□□□□ -1.24
COPB1-211ENST00000534234 APOL4Q9BPW4 351 aa7.31□□□□□ -1.24
COPB1-211ENST00000534234 CADM1Q9BY67 442 aaKnown RBP7.31□□□□□ -1.24
COPB1-211ENST00000534234 PRRG3Q9BZD7 231 aa7.31□□□□□ -1.24
COPB1-211ENST00000534234 NUFIP1Q9UHK0 495 aaKnown RBP7.31□□□□□ -1.24
COPB1-211ENST00000534234 ENPP5Q9UJA9 477 aa7.31□□□□□ -1.24
COPB1-211ENST00000534234 PIGLQ9Y2B2 252 aa7.31□□□□□ -1.24
COPB1-211ENST00000534234 RNF114Q9Y508 228 aa7.31□□□□□ -1.24
COPB1-211ENST00000534234 MEIOCA2RUB1 952 aa7.3□□□□□ -1.24
COPB1-211ENST00000534234 SLC22A31A6NKX4 558 aa7.3□□□□□ -1.24
COPB1-211ENST00000534234 OR5B21A6NL26 309 aa7.3□□□□□ -1.24
COPB1-211ENST00000534234 LOC110117498-PIK3R3F6TDL0 507 aa7.3□□□□□ -1.24
COPB1-211ENST00000534234 G3V2T6 193 aa7.3□□□□□ -1.24
COPB1-211ENST00000534234 M0R1W7 72 aa7.3□□□□□ -1.24
COPB1-211ENST00000534234 NPFFO15130 113 aa7.3□□□□□ -1.24
COPB1-211ENST00000534234 MAGEB4O15481 346 aaPredicted RBP7.3□□□□□ -1.24
COPB1-211ENST00000534234 KCNAB3O43448 404 aa7.3□□□□□ -1.24
COPB1-211ENST00000534234 MITFO75030 526 aaPredicted RBP7.3□□□□□ -1.24
COPB1-211ENST00000534234 MTRF1O75570 445 aaKnown RBP7.3□□□□□ -1.24
COPB1-211ENST00000534234 DHRS3O75911 302 aa7.3□□□□□ -1.24
COPB1-211ENST00000534234 PAHP00439 452 aa7.3□□□□□ -1.24
COPB1-211ENST00000534234 NRASP01111 189 aa7.3□□□□□ -1.24
COPB1-211ENST00000534234 IGLV3-1P01715 115 aa7.3□□□□□ -1.24
COPB1-211ENST00000534234 TTRP02766 147 aa7.3□□□□□ -1.24
COPB1-211ENST00000534234 EPHA2P29317 976 aa7.3□□□□□ -1.24
COPB1-211ENST00000534234 UBE2E1P51965 193 aa7.3□□□□□ -1.24
COPB1-211ENST00000534234 EFNB1P98172 346 aa7.3□□□□□ -1.24
COPB1-211ENST00000534234 MFGE8Q08431 387 aaPredicted RBP7.3□□□□□ -1.24
COPB1-211ENST00000534234 KLRD1Q13241 179 aa7.3□□□□□ -1.24
COPB1-211ENST00000534234 BLMHQ13867 455 aa7.3□□□□□ -1.24
COPB1-211ENST00000534234 TAF9Q16594 264 aa7.3□□□□□ -1.24
COPB1-211ENST00000534234 ZNF684Q5T5D7 378 aa7.3□□□□□ -1.24
COPB1-211ENST00000534234 NXNL2Q5VZ03 156 aa7.3□□□□□ -1.24
COPB1-211ENST00000534234 PLCXD3Q63HM9 321 aa7.3□□□□□ -1.24
COPB1-211ENST00000534234 BRICD5Q6PL45 260 aa7.3□□□□□ -1.24
COPB1-211ENST00000534234 ZNF322Q6U7Q0 402 aaPredicted RBP7.3□□□□□ -1.24
COPB1-211ENST00000534234 GDPGP1Q6ZNW5 385 aa7.3□□□□□ -1.24
COPB1-211ENST00000534234 TMEM185AQ8NFB2 350 aa7.3□□□□□ -1.24
COPB1-211ENST00000534234 SDSLQ96GA7 329 aa7.3□□□□□ -1.24
COPB1-211ENST00000534234 IL4I1Q96RQ9 567 aa7.3□□□□□ -1.24
COPB1-211ENST00000534234 METTL8Q9H825 291 aaKnown RBP7.3□□□□□ -1.24
COPB1-211ENST00000534234 KRT84Q9NSB2 600 aa7.3□□□□□ -1.24
COPB1-211ENST00000534234 RASL12Q9NYN1 266 aa7.3□□□□□ -1.24
COPB1-211ENST00000534234 ZNF222Q9UK12 451 aa7.3□□□□□ -1.24
COPB1-211ENST00000534234 GTF2A1LQ9UNN4 478 aa7.3□□□□□ -1.24
COPB1-211ENST00000534234 MEGF8Q7Z7M0 2845 aa7.3□□□□□ -1.24
COPB1-211ENST00000534234 BTBD17A6NE02 478 aa7.29□□□□□ -1.24
COPB1-211ENST00000534234 RFPL4AA6NLU0 287 aa7.29□□□□□ -1.24
COPB1-211ENST00000534234 RFPL4AL1F8VTS6 287 aa7.29□□□□□ -1.24
COPB1-211ENST00000534234 H0YAE9 185 aa7.29□□□□□ -1.24
COPB1-211ENST00000534234 M0R129 80 aa7.29□□□□□ -1.24
COPB1-211ENST00000534234 SRSF10O75494 262 aaKnown RBP7.29□□□□□ -1.24
COPB1-211ENST00000534234 SAA4P35542 130 aa7.29□□□□□ -1.24
COPB1-211ENST00000534234 HAAOP46952 286 aa7.29□□□□□ -1.24
COPB1-211ENST00000534234 CAPZA1P52907 286 aa7.29□□□□□ -1.24
COPB1-211ENST00000534234 BNIP1Q12981 228 aa7.29□□□□□ -1.24
COPB1-211ENST00000534234 ATP6AP1Q15904 470 aa7.29□□□□□ -1.24
COPB1-211ENST00000534234 CLVS2Q5SYC1 327 aa7.29□□□□□ -1.24
COPB1-211ENST00000534234 AADACL4Q5VUY2 407 aa7.29□□□□□ -1.24
COPB1-211ENST00000534234 SLX4IPQ5VYV7 408 aa7.29□□□□□ -1.24
COPB1-211ENST00000534234 NCR3LG1Q68D85 454 aa7.29□□□□□ -1.24
COPB1-211ENST00000534234 ACP7Q6ZNF0 438 aa7.29□□□□□ -1.24
COPB1-211ENST00000534234 ZNF573Q86YE8 665 aa7.29□□□□□ -1.24
COPB1-211ENST00000534234 ZDHHC13Q8IUH4 622 aa7.29□□□□□ -1.24
COPB1-211ENST00000534234 SLC35F2Q8IXU6 374 aa7.29□□□□□ -1.24
COPB1-211ENST00000534234 ELMOD2Q8IZ81 293 aa7.29□□□□□ -1.24
COPB1-211ENST00000534234 PNKDQ8N490 385 aa7.29□□□□□ -1.24
COPB1-211ENST00000534234 ZSCAN4Q8NAM6 433 aaPredicted RBP7.29□□□□□ -1.24
COPB1-211ENST00000534234 TMEM163Q8TC26 289 aa7.29□□□□□ -1.24
COPB1-211ENST00000534234 ZNF488Q96MN9 340 aa7.29□□□□□ -1.24
COPB1-211ENST00000534234 MNTQ99583 582 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms