RNA–Protein interactions for RNA: ENST00000534172.1

CSMD3-210, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 5

Gene CSMD3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-210ENST00000534172 GABRA4P48169 554 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 TDGF1P3P51864 188 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 HMGCS2P54868 508 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 LCN2P80188 198 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 DCDP81605 110 aaKnown RBP2.9□□□□□ -1.95
CSMD3-210ENST00000534172 TFAMQ00059 246 aaKnown RBP2.9□□□□□ -1.95
CSMD3-210ENST00000534172 DHODHQ02127 395 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 FABP9Q0Z7S8 132 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 SLAMF1Q13291 335 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 UBE2SQ16763 222 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 MRGPRG-AS1Q2M3A8 158 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 SNAI3Q3KNW1 292 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 RBM48Q5RL73 367 aaKnown RBP2.9□□□□□ -1.95
CSMD3-210ENST00000534172 WDR25Q64LD2 544 aaPredicted RBP2.9□□□□□ -1.95
CSMD3-210ENST00000534172 ENPP6Q6UWR7 440 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 CLEC18BQ6UXF7 455 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 ABHD13Q7L211 337 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 SSX7Q7RTT5 188 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 UNC93AQ86WB7 457 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 WDFY1Q8IWB7 410 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 MFSD6LQ8IWD5 586 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 OR8D4Q8NGM9 314 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 SPPL2AQ8TCT8 520 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 C1orf54Q8WWF1 131 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 RBP7Q96R05 134 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 HOPXQ9BPY8 73 aaPredicted RBP2.9□□□□□ -1.95
CSMD3-210ENST00000534172 KLHDC3Q9BQ90 382 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 SLC35A5Q9BS91 424 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 SYT11Q9BT88 431 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 SLIRPQ9GZT3 109 aaKnown RBP2.9□□□□□ -1.95
CSMD3-210ENST00000534172 FAM96AQ9H5X1 160 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 PTGES2Q9H7Z7 377 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 TPT1P8Q9HAU6 139 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 NMRAL1Q9HBL8 299 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 DDIT4Q9NX09 232 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 SCN3BQ9NY72 215 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 SLC17A7Q9P2U7 560 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 CLEC4EQ9ULY5 219 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 PPP1R3CQ9UQK1 317 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 SLC22A13Q9Y226 551 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 EXOSC1Q9Y3B2 195 aaKnown RBP2.9□□□□□ -1.95
CSMD3-210ENST00000534172 OR51B4Q9Y5P0 310 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 YLPM1P49750 1951 aaKnown RBP2.9□□□□□ -1.95
CSMD3-210ENST00000534172 GCN1Q92616 2671 aaKnown RBP2.9□□□□□ -1.95
CSMD3-210ENST00000534172 FBN3Q75N90 2809 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 NAV2Q8IVL1 2488 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 TMEM72A0PK05 275 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 A8MWP6 167 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 TRIM49D1C9J1S8 452 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.9□□□□□ -1.95
CSMD3-210ENST00000534172 CDIPTO14735 213 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 MYL12BO14950 172 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 UBDO15205 165 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 MSH4O15457 936 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 TAPBPO15533 448 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 PGAM1P18669 254 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 MYL12AP19105 171 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 GNRHRP30968 328 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 SDC4P31431 198 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 FCGR2CP31995 323 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 EVX1P49640 407 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 RPS20P60866 119 aaKnown RBP2.9□□□□□ -1.95
CSMD3-210ENST00000534172 SELENOTP62341 195 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 NTHL1P78549 312 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 DEFA5Q01523 94 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 CAV1Q03135 178 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 KLRB1Q12918 225 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 SERTAD2Q14140 314 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 MLF2Q15773 248 aaPredicted RBP2.9□□□□□ -1.95
CSMD3-210ENST00000534172 SLC25A52Q3SY17 297 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 NHLRC3Q5JS37 347 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 FAM74A1Q5RGS3 127 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 TPRG1LQ5T0D9 272 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 ADAMTSL4-AS1Q5T5F5 129 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 MARC1Q5VT66 337 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 C9orf135Q5VTT2 229 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 TRIQKQ629K1 86 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 PWWP2BQ6NUJ5 590 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 ADAMTSL5Q6ZMM2 481 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 ZNF836Q6ZNA1 936 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 PGAM4Q8N0Y7 254 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 PUSL1Q8N0Z8 303 aaKnown RBP2.9□□□□□ -1.95
CSMD3-210ENST00000534172 DAW1Q8N136 415 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 LINC01561Q8N1V8 128 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 C17orf78Q8N4C9 275 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 CYB561A3Q8NBI2 242 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 OR52I1Q8NGK6 324 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 OR4A4PQ8NGN8 299 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 OR11L1Q8NGX0 322 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 OR52E5Q8NH55 327 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 OR4C6Q8NH72 309 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 PCNPQ8WW12 178 aaKnown RBP2.9□□□□□ -1.95
CSMD3-210ENST00000534172 HGDQ93099 445 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 C8orf44Q96CB5 159 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 CNRIP1Q96F85 164 aaPredicted RBP2.9□□□□□ -1.95
CSMD3-210ENST00000534172 TMEM56Q96MV1 263 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 TNFRSF13CQ96RJ3 184 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 ZNF382Q96SR6 550 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 POPDC2Q9HBU9 364 aa2.9□□□□□ -1.95
CSMD3-210ENST00000534172 FBXO6Q9NRD1 293 aaPredicted RBP2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms