RNA–Protein interactions for RNA: ENST00000533931.1

CTTN-215, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-215ENST00000533931 MOGAT3Q86VF5 341 aa13.15□□□□□ -0.3
CTTN-215ENST00000533931 KRTAP1-3Q8IUG1 177 aa13.15□□□□□ -0.3
CTTN-215ENST00000533931 C11orf53Q8IXP5 236 aa13.15□□□□□ -0.3
CTTN-215ENST00000533931 ZNF525Q8N782 197 aa13.15□□□□□ -0.3
CTTN-215ENST00000533931 C10orf105Q8TEF2 133 aa13.15□□□□□ -0.3
CTTN-215ENST00000533931 FAM168AQ92567 244 aa13.15□□□□□ -0.3
CTTN-215ENST00000533931 YIPF5Q969M3 257 aa13.15□□□□□ -0.3
CTTN-215ENST00000533931 TMEM203Q969S6 136 aa13.15□□□□□ -0.3
CTTN-215ENST00000533931 TIMD4Q96H15 378 aa13.15□□□□□ -0.3
CTTN-215ENST00000533931 NOX4Q9NPH5 578 aa13.15□□□□□ -0.3
CTTN-215ENST00000533931 RNF7Q9UBF6 113 aa13.15□□□□□ -0.3
CTTN-215ENST00000533931 STUB1Q9UNE7 303 aa13.15□□□□□ -0.3
CTTN-215ENST00000533931 CSMD2Q7Z408 3487 aa13.14□□□□□ -0.31
CTTN-215ENST00000533931 A6NLC8 198 aa13.14□□□□□ -0.31
CTTN-215ENST00000533931 CYSRT1A8MQ03 144 aa13.14□□□□□ -0.31
CTTN-215ENST00000533931 VWC2LB2RUY7 222 aa13.14□□□□□ -0.31
CTTN-215ENST00000533931 TMEM178BH3BS89 294 aa13.14□□□□□ -0.31
CTTN-215ENST00000533931 GABRPO00591 440 aa13.14□□□□□ -0.31
CTTN-215ENST00000533931 PIN1P1O15428 100 aa13.14□□□□□ -0.31
CTTN-215ENST00000533931 NOS1APO75052 506 aaPredicted RBP13.14□□□□□ -0.31
CTTN-215ENST00000533931 LY6HO94772 140 aa13.14□□□□□ -0.31
CTTN-215ENST00000533931 CPT2P23786 658 aa13.14□□□□□ -0.31
CTTN-215ENST00000533931 COL8A2P25067 703 aa13.14□□□□□ -0.31
CTTN-215ENST00000533931 BDKRB2P30411 391 aa13.14□□□□□ -0.31
CTTN-215ENST00000533931 CLEC12BQ2HXU8 276 aa13.14□□□□□ -0.31
CTTN-215ENST00000533931 WDR82Q6UXN9 313 aa13.14□□□□□ -0.31
CTTN-215ENST00000533931 SAXO1Q8IYX7 474 aa13.14□□□□□ -0.31
CTTN-215ENST00000533931 SCCPDHQ8NBX0 429 aa13.14□□□□□ -0.31
CTTN-215ENST00000533931 ZNF671Q8TAW3 534 aa13.14□□□□□ -0.31
CTTN-215ENST00000533931 AQP3Q92482 292 aa13.14□□□□□ -0.31
CTTN-215ENST00000533931 CCL17Q92583 94 aa13.14□□□□□ -0.31
CTTN-215ENST00000533931 RAB1CQ92928 201 aa13.14□□□□□ -0.31
CTTN-215ENST00000533931 PIMREGQ9BSJ6 248 aa13.14□□□□□ -0.31
CTTN-215ENST00000533931 SLITRK2Q9H156 845 aa13.14□□□□□ -0.31
CTTN-215ENST00000533931 RHOFQ9HBH0 211 aa13.14□□□□□ -0.31
CTTN-215ENST00000533931 C1orf123Q9NWV4 160 aa13.14□□□□□ -0.31
CTTN-215ENST00000533931 USF3Q68DE3 2245 aa13.13□□□□□ -0.31
CTTN-215ENST00000533931 TRAV8-7A0A075B6U6 113 aa13.13□□□□□ -0.31
CTTN-215ENST00000533931 FAM230AA0A1W2PPH8 454 aa13.13□□□□□ -0.31
CTTN-215ENST00000533931 CDIPTO14735 213 aa13.13□□□□□ -0.31
CTTN-215ENST00000533931 CDC14BO60729 498 aa13.13□□□□□ -0.31
CTTN-215ENST00000533931 LHBP01229 141 aa13.13□□□□□ -0.31
CTTN-215ENST00000533931 HCKP08631 526 aa13.13□□□□□ -0.31
CTTN-215ENST00000533931 CD36P16671 472 aa13.13□□□□□ -0.31
CTTN-215ENST00000533931 PMELP40967 661 aa13.13□□□□□ -0.31
CTTN-215ENST00000533931 RANBP1P43487 201 aa13.13□□□□□ -0.31
CTTN-215ENST00000533931 HAAOP46952 286 aa13.13□□□□□ -0.31
CTTN-215ENST00000533931 MTCP1P56278 107 aa13.13□□□□□ -0.31
CTTN-215ENST00000533931 KISS1Q15726 138 aa13.13□□□□□ -0.31
CTTN-215ENST00000533931 HAGHLQ6PII5 290 aaPredicted RBP13.13□□□□□ -0.31
CTTN-215ENST00000533931 ZSCAN4Q8NAM6 433 aaPredicted RBP13.13□□□□□ -0.31
CTTN-215ENST00000533931 OR13F1Q8NGS4 319 aa13.13□□□□□ -0.31
CTTN-215ENST00000533931 YIPF6Q96EC8 236 aa13.13□□□□□ -0.31
CTTN-215ENST00000533931 TCF7L1Q9HCS4 588 aa13.13□□□□□ -0.31
CTTN-215ENST00000533931 SNTG1Q9NSN8 517 aa13.13□□□□□ -0.31
CTTN-215ENST00000533931 RASL12Q9NYN1 266 aa13.13□□□□□ -0.31
CTTN-215ENST00000533931 NPTNQ9Y639 398 aa13.13□□□□□ -0.31
CTTN-215ENST00000533931 TEX15Q9BXT5 2789 aa13.13□□□□□ -0.31
CTTN-215ENST00000533931 OTOGQ6ZRI0 2925 aa13.12□□□□□ -0.31
CTTN-215ENST00000533931 TRAV1-2A0A0B4J238 106 aa13.12□□□□□ -0.31
CTTN-215ENST00000533931 SRRM5B3KS81 715 aa13.12□□□□□ -0.31
CTTN-215ENST00000533931 CYB5AP00167 134 aa13.12□□□□□ -0.31
CTTN-215ENST00000533931 TFAP2AP05549 437 aa13.12□□□□□ -0.31
CTTN-215ENST00000533931 CD37P11049 281 aa13.12□□□□□ -0.31
CTTN-215ENST00000533931 SRMP19623 302 aa13.12□□□□□ -0.31
CTTN-215ENST00000533931 NR4A2P43354 598 aa13.12□□□□□ -0.31
CTTN-215ENST00000533931 GPR6P46095 362 aaPredicted RBP13.12□□□□□ -0.31
CTTN-215ENST00000533931 ALDH3B2P48448 385 aa13.12□□□□□ -0.31
CTTN-215ENST00000533931 PSMD7P51665 324 aa13.12□□□□□ -0.31
CTTN-215ENST00000533931 KCNJ8Q15842 424 aa13.12□□□□□ -0.31
CTTN-215ENST00000533931 FAM90A1Q86YD7 464 aa13.12□□□□□ -0.31
CTTN-215ENST00000533931 MKXQ8IYA7 352 aa13.12□□□□□ -0.31
CTTN-215ENST00000533931 Q8IYB0 196 aa13.12□□□□□ -0.31
CTTN-215ENST00000533931 POC1AQ8NBT0 407 aa13.12□□□□□ -0.31
CTTN-215ENST00000533931 OR51A2Q8NGJ7 313 aa13.12□□□□□ -0.31
CTTN-215ENST00000533931 TRMT10AQ8TBZ6 339 aaKnown RBP13.12□□□□□ -0.31
CTTN-215ENST00000533931 RPL3LQ92901 407 aaKnown RBP13.12□□□□□ -0.31
CTTN-215ENST00000533931 C12orf43Q96C57 262 aaKnown RBP13.12□□□□□ -0.31
CTTN-215ENST00000533931 FOXRED1Q96CU9 486 aaPredicted RBP13.12□□□□□ -0.31
CTTN-215ENST00000533931 UQCC2Q9BRT2 126 aa13.12□□□□□ -0.31
CTTN-215ENST00000533931 METTL17Q9H7H0 456 aaPredicted RBP13.12□□□□□ -0.31
CTTN-215ENST00000533931 UFSP2Q9NUQ7 469 aa13.12□□□□□ -0.31
CTTN-215ENST00000533931 SCOCQ9UIL1 159 aa13.12□□□□□ -0.31
CTTN-215ENST00000533931 SSR3Q9UNL2 185 aa13.12□□□□□ -0.31
CTTN-215ENST00000533931 GSTK1Q9Y2Q3 226 aa13.12□□□□□ -0.31
CTTN-215ENST00000533931 CACNG2Q9Y698 323 aa13.12□□□□□ -0.31
CTTN-215ENST00000533931 TANC2Q9HCD6 1990 aa13.12□□□□□ -0.31
CTTN-215ENST00000533931 CCDC168Q8NDH2 2452 aa13.12□□□□□ -0.31
CTTN-215ENST00000533931 IGKV1-27A0A075B6S5 117 aa13.11□□□□□ -0.31
CTTN-215ENST00000533931 hCG_1807616A0A1W2PRN6 198 aa13.11□□□□□ -0.31
CTTN-215ENST00000533931 LYNX1G3V0Z9 82 aa13.11□□□□□ -0.31
CTTN-215ENST00000533931 PGA5P0DJD9 388 aa13.11□□□□□ -0.31
CTTN-215ENST00000533931 LYNX1P0DP58 116 aa13.11□□□□□ -0.31
CTTN-215ENST00000533931 BTG1P62324 171 aa13.11□□□□□ -0.31
CTTN-215ENST00000533931 PDZK1IP1Q13113 114 aa13.11□□□□□ -0.31
CTTN-215ENST00000533931 INSL4Q14641 139 aa13.11□□□□□ -0.31
CTTN-215ENST00000533931 TMEM155Q4W5P6 130 aa13.11□□□□□ -0.31
CTTN-215ENST00000533931 DDI2Q5TDH0 399 aa13.11□□□□□ -0.31
CTTN-215ENST00000533931 TEX36Q5VZQ5 186 aa13.11□□□□□ -0.31
CTTN-215ENST00000533931 SPNS3Q6ZMD2 512 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms