RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 MTFP1Q9UDX5 166 aa7.1□□□□□ -1.27
NEDD8-207ENST00000533242 RHBDD3Q9Y3P4 386 aa7.1□□□□□ -1.27
NEDD8-207ENST00000533242 SLC17A2O00624 439 aa7.1□□□□□ -1.27
NEDD8-207ENST00000533242 SIX6O95475 246 aa7.1□□□□□ -1.27
NEDD8-207ENST00000533242 ECDO95905 644 aaPredicted RBP7.1□□□□□ -1.27
NEDD8-207ENST00000533242 CD3DP04234 171 aa7.1□□□□□ -1.27
NEDD8-207ENST00000533242 IGFBP3P17936 291 aaPredicted RBP7.1□□□□□ -1.27
NEDD8-207ENST00000533242 USF1P22415 310 aaPredicted RBP7.1□□□□□ -1.27
NEDD8-207ENST00000533242 EIF1P41567 113 aaKnown RBP7.1□□□□□ -1.27
NEDD8-207ENST00000533242 GLO1Q04760 184 aa7.1□□□□□ -1.27
NEDD8-207ENST00000533242 SPOCK1Q08629 439 aa7.1□□□□□ -1.27
NEDD8-207ENST00000533242 GLYATL3Q5SZD4 288 aa7.1□□□□□ -1.27
NEDD8-207ENST00000533242 Q6ZT83 130 aa7.1□□□□□ -1.27
NEDD8-207ENST00000533242 MISPQ8IVT2 679 aa7.1□□□□□ -1.27
NEDD8-207ENST00000533242 FBXL14Q8N1E6 418 aa7.1□□□□□ -1.27
NEDD8-207ENST00000533242 OR10S1Q8NGN2 331 aa7.1□□□□□ -1.27
NEDD8-207ENST00000533242 STK35Q8TDR2 534 aa7.1□□□□□ -1.27
NEDD8-207ENST00000533242 MUCL1Q96DR8 90 aa7.1□□□□□ -1.27
NEDD8-207ENST00000533242 SORCS2Q96PQ0 1159 aa7.1□□□□□ -1.27
NEDD8-207ENST00000533242 DPCDQ9BVM2 203 aaPredicted RBP7.1□□□□□ -1.27
NEDD8-207ENST00000533242 SRXN1Q9BYN0 137 aa7.1□□□□□ -1.27
NEDD8-207ENST00000533242 ZNF275Q9NSD4 429 aaPredicted RBP7.1□□□□□ -1.27
NEDD8-207ENST00000533242 EIF3KQ9UBQ5 218 aaKnown RBP7.1□□□□□ -1.27
NEDD8-207ENST00000533242 ZNF69Q9UC07 566 aa7.1□□□□□ -1.27
NEDD8-207ENST00000533242 KCNS2Q9ULS6 477 aa7.1□□□□□ -1.27
NEDD8-207ENST00000533242 LOC107986453A0A1B0GWG9 222 aa7.09□□□□□ -1.27
NEDD8-207ENST00000533242 GJE1A6NN92 205 aa7.09□□□□□ -1.27
NEDD8-207ENST00000533242 LEUTXA8MZ59 168 aa7.09□□□□□ -1.27
NEDD8-207ENST00000533242 ABCD4O14678 606 aa7.09□□□□□ -1.27
NEDD8-207ENST00000533242 PHYHO14832 338 aa7.09□□□□□ -1.27
NEDD8-207ENST00000533242 ZNF432O94892 652 aa7.09□□□□□ -1.27
NEDD8-207ENST00000533242 HNF1AP20823 631 aa7.09□□□□□ -1.27
NEDD8-207ENST00000533242 CFPP27918 469 aa7.09□□□□□ -1.27
NEDD8-207ENST00000533242 OR3A3P47888 321 aa7.09□□□□□ -1.27
NEDD8-207ENST00000533242 OR3A2P47893 321 aa7.09□□□□□ -1.27
NEDD8-207ENST00000533242 RIDAP52758 137 aaKnown RBP7.09□□□□□ -1.27
NEDD8-207ENST00000533242 SRSF2Q01130 221 aaKnown RBP7.09□□□□□ -1.27
NEDD8-207ENST00000533242 RAB35Q15286 201 aa7.09□□□□□ -1.27
NEDD8-207ENST00000533242 TIMM23BQ5SRD1 257 aa7.09□□□□□ -1.27
NEDD8-207ENST00000533242 LRFN4Q6PJG9 635 aa7.09□□□□□ -1.27
NEDD8-207ENST00000533242 ZNF782Q6ZMW2 699 aaPredicted RBP7.09□□□□□ -1.27
NEDD8-207ENST00000533242 ZNF767PQ75MW2 155 aa7.09□□□□□ -1.27
NEDD8-207ENST00000533242 SLC36A1Q7Z2H8 476 aa7.09□□□□□ -1.27
NEDD8-207ENST00000533242 LYPD6Q86Y78 171 aa7.09□□□□□ -1.27
NEDD8-207ENST00000533242 ZNF525Q8N782 197 aa7.09□□□□□ -1.27
NEDD8-207ENST00000533242 OR51S1Q8NGJ8 323 aa7.09□□□□□ -1.27
NEDD8-207ENST00000533242 OR8S1Q8NH09 359 aa7.09□□□□□ -1.27
NEDD8-207ENST00000533242 ASB17Q8WXJ9 295 aa7.09□□□□□ -1.27
NEDD8-207ENST00000533242 SLC25A44Q96H78 314 aaPredicted RBP7.09□□□□□ -1.27
NEDD8-207ENST00000533242 SOX7Q9BT81 388 aa7.09□□□□□ -1.27
NEDD8-207ENST00000533242 MGAT4CQ9UBM8 478 aa7.09□□□□□ -1.27
NEDD8-207ENST00000533242 SCP2D1Q9UJQ7 156 aa7.09□□□□□ -1.27
NEDD8-207ENST00000533242 DHDHQ9UQ10 334 aa7.09□□□□□ -1.27
NEDD8-207ENST00000533242 LOC100289279A0A1B0GTE1 492 aa7.09□□□□□ -1.28
NEDD8-207ENST00000533242 A0A1W2PNR3 127 aa7.09□□□□□ -1.28
NEDD8-207ENST00000533242 RPS10-NUDT3A0A1W2PQS6 291 aa7.09□□□□□ -1.28
NEDD8-207ENST00000533242 E7EQL1 145 aa7.09□□□□□ -1.28
NEDD8-207ENST00000533242 P2RY10O00398 339 aa7.09□□□□□ -1.28
NEDD8-207ENST00000533242 OR2T1O43869 369 aa7.09□□□□□ -1.28
NEDD8-207ENST00000533242 SLC22A5O76082 557 aa7.09□□□□□ -1.28
NEDD8-207ENST00000533242 CXCL2P19875 107 aa7.09□□□□□ -1.28
NEDD8-207ENST00000533242 SFTPDP35247 375 aa7.09□□□□□ -1.28
NEDD8-207ENST00000533242 H2BFSP57053 126 aa7.09□□□□□ -1.28
NEDD8-207ENST00000533242 AP3S2P59780 193 aa7.09□□□□□ -1.28
NEDD8-207ENST00000533242 EXOSC2Q13868 293 aaKnown RBP7.09□□□□□ -1.28
NEDD8-207ENST00000533242 STK11Q15831 433 aa7.09□□□□□ -1.28
NEDD8-207ENST00000533242 RAB11BQ15907 218 aa7.09□□□□□ -1.28
NEDD8-207ENST00000533242 FAM120AOSQ5T036 256 aa7.09□□□□□ -1.28
NEDD8-207ENST00000533242 METTL11BQ5VVY1 283 aa7.09□□□□□ -1.28
NEDD8-207ENST00000533242 DCAF12L2Q5VW00 463 aa7.09□□□□□ -1.28
NEDD8-207ENST00000533242 ZNF626Q68DY1 528 aa7.09□□□□□ -1.28
NEDD8-207ENST00000533242 FTMTQ8N4E7 242 aa7.09□□□□□ -1.28
NEDD8-207ENST00000533242 OR4D6Q8NGJ1 314 aa7.09□□□□□ -1.28
NEDD8-207ENST00000533242 RBP7Q96R05 134 aa7.09□□□□□ -1.28
NEDD8-207ENST00000533242 MRI1Q9BV20 369 aa7.09□□□□□ -1.28
NEDD8-207ENST00000533242 ATG5Q9H1Y0 275 aa7.09□□□□□ -1.28
NEDD8-207ENST00000533242 BCO1Q9HAY6 547 aa7.09□□□□□ -1.28
NEDD8-207ENST00000533242 PRSS50Q9UI38 385 aa7.09□□□□□ -1.28
NEDD8-207ENST00000533242 NBEAL1Q6ZS30 2694 aa7.08□□□□□ -1.28
NEDD8-207ENST00000533242 A0A1B0GVI7 797 aa7.08□□□□□ -1.28
NEDD8-207ENST00000533242 NAP1L6A6NFF2 107 aa7.08□□□□□ -1.28
NEDD8-207ENST00000533242 LIPT2A6NK58 231 aa7.08□□□□□ -1.28
NEDD8-207ENST00000533242 RBBP9O75884 186 aa7.08□□□□□ -1.28
NEDD8-207ENST00000533242 LYZL6O75951 148 aa7.08□□□□□ -1.28
NEDD8-207ENST00000533242 COX5AP20674 150 aa7.08□□□□□ -1.28
NEDD8-207ENST00000533242 CDAP32320 146 aa7.08□□□□□ -1.28
NEDD8-207ENST00000533242 FABP6P51161 128 aa7.08□□□□□ -1.28
NEDD8-207ENST00000533242 MECP2P51608 486 aaKnown RBP7.08□□□□□ -1.28
NEDD8-207ENST00000533242 EFNA4P52798 201 aa7.08□□□□□ -1.28
NEDD8-207ENST00000533242 BIDP55957 195 aa7.08□□□□□ -1.28
NEDD8-207ENST00000533242 MRPS10P82664 201 aaKnown RBP7.08□□□□□ -1.28
NEDD8-207ENST00000533242 PCK2Q16822 640 aa7.08□□□□□ -1.28
NEDD8-207ENST00000533242 KCTD18Q6PI47 426 aaPredicted RBP7.08□□□□□ -1.28
NEDD8-207ENST00000533242 H1FNTQ75WM6 255 aaPredicted RBP7.08□□□□□ -1.28
NEDD8-207ENST00000533242 OR8H3Q8N146 312 aa7.08□□□□□ -1.28
NEDD8-207ENST00000533242 MUC15Q8N387 334 aa7.08□□□□□ -1.28
NEDD8-207ENST00000533242 MFSD8Q8NHS3 518 aa7.08□□□□□ -1.28
NEDD8-207ENST00000533242 C11orf40Q8WZ69 217 aa7.08□□□□□ -1.28
NEDD8-207ENST00000533242 CMBLQ96DG6 245 aa7.08□□□□□ -1.28
NEDD8-207ENST00000533242 GINS4Q9BRT9 223 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms