RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 METTL11BQ5VVY1 283 aa25.05■■□□□ 1.6
SSSCA1-207ENST00000533115 TMEM42Q69YG0 159 aa25.05■■□□□ 1.6
SSSCA1-207ENST00000533115 C12orf54Q6X4T0 127 aa25.05■■□□□ 1.6
SSSCA1-207ENST00000533115 ZNF671Q8TAW3 534 aa25.05■■□□□ 1.6
SSSCA1-207ENST00000533115 AQP3Q92482 292 aa25.05■■□□□ 1.6
SSSCA1-207ENST00000533115 RORBQ92753 470 aa25.05■■□□□ 1.6
SSSCA1-207ENST00000533115 TBX15Q96SF7 602 aa25.05■■□□□ 1.6
SSSCA1-207ENST00000533115 C9orf16Q9BUW7 83 aa25.05■■□□□ 1.6
SSSCA1-207ENST00000533115 NLKQ9UBE8 527 aa25.05■■□□□ 1.6
SSSCA1-207ENST00000533115 TMEM89A2RUT3 159 aa25.04■■□□□ 1.6
SSSCA1-207ENST00000533115 NKX6-3A6NJ46 265 aa25.04■■□□□ 1.6
SSSCA1-207ENST00000533115 DLGAP1O14490 977 aa25.04■■□□□ 1.6
SSSCA1-207ENST00000533115 GPR37O15354 613 aa25.04■■□□□ 1.6
SSSCA1-207ENST00000533115 CCL1P22362 96 aa25.04■■□□□ 1.6
SSSCA1-207ENST00000533115 BPIFB3P59826 476 aa25.04■■□□□ 1.6
SSSCA1-207ENST00000533115 ZNF85Q03923 595 aa25.04■■□□□ 1.6
SSSCA1-207ENST00000533115 LRRC10Q5BKY1 277 aa25.04■■□□□ 1.6
SSSCA1-207ENST00000533115 MEDAGQ5VYS4 303 aa25.04■■□□□ 1.6
SSSCA1-207ENST00000533115 HAGHLQ6PII5 290 aaPredicted RBP25.04■■□□□ 1.6
SSSCA1-207ENST00000533115 BRD3OSQ6XYD6 125 aa25.04■■□□□ 1.6
SSSCA1-207ENST00000533115 ZNF788Q6ZQV5 615 aa25.04■■□□□ 1.6
SSSCA1-207ENST00000533115 ANGPTL6Q8NI99 470 aa25.04■■□□□ 1.6
SSSCA1-207ENST00000533115 GCDHQ92947 438 aaPredicted RBP25.04■■□□□ 1.6
SSSCA1-207ENST00000533115 SIRPDQ9H106 197 aa25.04■■□□□ 1.6
SSSCA1-207ENST00000533115 CNTD2Q9H8S5 307 aa25.04■■□□□ 1.6
SSSCA1-207ENST00000533115 GPR173Q9NS66 373 aa25.04■■□□□ 1.6
SSSCA1-207ENST00000533115 DNAJC9-AS1A6NH13 148 aa25.03■■□□□ 1.6
SSSCA1-207ENST00000533115 PRTN3P24158 256 aa25.03■■□□□ 1.6
SSSCA1-207ENST00000533115 ARF6P62330 175 aa25.03■■□□□ 1.6
SSSCA1-207ENST00000533115 OCLNQ16625 522 aa25.03■■□□□ 1.6
SSSCA1-207ENST00000533115 ODF4Q2M2E3 257 aa25.03■■□□□ 1.6
SSSCA1-207ENST00000533115 MED30Q96HR3 178 aa25.03■■□□□ 1.6
SSSCA1-207ENST00000533115 C1orf147Q96MC9 270 aaPredicted RBP25.03■■□□□ 1.6
SSSCA1-207ENST00000533115 GAFA1Q96PS6 74 aa25.03■■□□□ 1.6
SSSCA1-207ENST00000533115 MBOAT4Q96T53 435 aa25.03■■□□□ 1.6
SSSCA1-207ENST00000533115 ZMAT3Q9HA38 289 aaKnown RBP25.03■■□□□ 1.6
SSSCA1-207ENST00000533115 TENM1Q9UKZ4 2725 aa25.02■■□□□ 1.6
SSSCA1-207ENST00000533115 A6NIN4 97 aa25.02■■□□□ 1.6
SSSCA1-207ENST00000533115 COMPP49747 757 aaPredicted RBP25.02■■□□□ 1.6
SSSCA1-207ENST00000533115 LY6G5BQ8NDX9 201 aa25.02■■□□□ 1.6
SSSCA1-207ENST00000533115 TMIGD2Q96BF3 282 aa25.02■■□□□ 1.6
SSSCA1-207ENST00000533115 RNFT2Q96EX2 444 aa25.02■■□□□ 1.6
SSSCA1-207ENST00000533115 DUX5Q96PT3 197 aa25.02■■□□□ 1.6
SSSCA1-207ENST00000533115 GNG8Q9UK08 70 aa25.02■■□□□ 1.6
SSSCA1-207ENST00000533115 GMPPBQ9Y5P6 360 aa25.02■■□□□ 1.6
SSSCA1-207ENST00000533115 A0A1B0GVI7 797 aa25.01■■□□□ 1.59
SSSCA1-207ENST00000533115 OR2AT4A6NND4 320 aa25.01■■□□□ 1.59
SSSCA1-207ENST00000533115 TFF1P04155 84 aa25.01■■□□□ 1.59
SSSCA1-207ENST00000533115 SELLP14151 372 aa25.01■■□□□ 1.59
SSSCA1-207ENST00000533115 ISL1P61371 349 aa25.01■■□□□ 1.59
SSSCA1-207ENST00000533115 IL13RA1P78552 427 aa25.01■■□□□ 1.59
SSSCA1-207ENST00000533115 PDCD1Q15116 288 aa25.01■■□□□ 1.59
SSSCA1-207ENST00000533115 TP53I3Q53FA7 332 aa25.01■■□□□ 1.59
SSSCA1-207ENST00000533115 FAM220AQ7Z4H9 259 aa25.01■■□□□ 1.59
SSSCA1-207ENST00000533115 PQLC1Q8N2U9 271 aa25.01■■□□□ 1.59
SSSCA1-207ENST00000533115 SLC29A1Q99808 456 aa25.01■■□□□ 1.59
SSSCA1-207ENST00000533115 CENPVL3A0A0U1RRI6 287 aa25■■□□□ 1.59
SSSCA1-207ENST00000533115 J3QRE1 110 aa25■■□□□ 1.59
SSSCA1-207ENST00000533115 SYT7O43581 403 aa25■■□□□ 1.59
SSSCA1-207ENST00000533115 ACAA1P09110 424 aaPredicted RBP25■■□□□ 1.59
SSSCA1-207ENST00000533115 HAAOP46952 286 aa25■■□□□ 1.59
SSSCA1-207ENST00000533115 ACTC1P68032 377 aa25■■□□□ 1.59
SSSCA1-207ENST00000533115 ACTA1P68133 377 aa25■■□□□ 1.59
SSSCA1-207ENST00000533115 DGUOKQ16854 277 aa25■■□□□ 1.59
SSSCA1-207ENST00000533115 ZNF573Q86YE8 665 aa25■■□□□ 1.59
SSSCA1-207ENST00000533115 PRSS35Q8N3Z0 413 aa25■■□□□ 1.59
SSSCA1-207ENST00000533115 DMRTB1Q96MA1 342 aa25■■□□□ 1.59
SSSCA1-207ENST00000533115 DCTN5Q9BTE1 182 aa25■■□□□ 1.59
SSSCA1-207ENST00000533115 ACOXLQ9NUZ1 547 aa25■■□□□ 1.59
SSSCA1-207ENST00000533115 RASL12Q9NYN1 266 aa25■■□□□ 1.59
SSSCA1-207ENST00000533115 KPTNQ9Y664 436 aa25■■□□□ 1.59
SSSCA1-207ENST00000533115 PQLC2LA1A4F0 135 aa24.99■■□□□ 1.59
SSSCA1-207ENST00000533115 SNTNA6NMZ2 147 aa24.99■■□□□ 1.59
SSSCA1-207ENST00000533115 HAX1O00165 279 aa24.99■■□□□ 1.59
SSSCA1-207ENST00000533115 SIGLEC5O15389 551 aa24.99■■□□□ 1.59
SSSCA1-207ENST00000533115 PSG2P11465 335 aa24.99■■□□□ 1.59
SSSCA1-207ENST00000533115 CDONQ4KMG0 1287 aa24.99■■□□□ 1.59
SSSCA1-207ENST00000533115 ZBTB49Q6ZSB9 765 aa24.99■■□□□ 1.59
SSSCA1-207ENST00000533115 POC1AQ8NBT0 407 aa24.99■■□□□ 1.59
SSSCA1-207ENST00000533115 ADI1Q9BV57 179 aa24.99■■□□□ 1.59
SSSCA1-207ENST00000533115 PLEKHA1Q9HB21 404 aa24.99■■□□□ 1.59
SSSCA1-207ENST00000533115 SLC25A10Q9UBX3 287 aaPredicted RBP24.99■■□□□ 1.59
SSSCA1-207ENST00000533115 IGKV1D-17A0A075B6S4 117 aa24.98■■□□□ 1.59
SSSCA1-207ENST00000533115 MDFIC2A0A1B0GVS7 189 aa24.98■■□□□ 1.59
SSSCA1-207ENST00000533115 H3BSH0 61 aa24.98■■□□□ 1.59
SSSCA1-207ENST00000533115 CLDN34H7C241 214 aa24.98■■□□□ 1.59
SSSCA1-207ENST00000533115 J3QT63 122 aa24.98■■□□□ 1.59
SSSCA1-207ENST00000533115 GABRA2P47869 451 aa24.98■■□□□ 1.59
SSSCA1-207ENST00000533115 SLC9A3R2Q15599 337 aa24.98■■□□□ 1.59
SSSCA1-207ENST00000533115 DEFB112Q30KQ8 113 aa24.98■■□□□ 1.59
SSSCA1-207ENST00000533115 RUSC1-AS1Q66K80 236 aa24.98■■□□□ 1.59
SSSCA1-207ENST00000533115 KCTD20Q7Z5Y7 419 aa24.98■■□□□ 1.59
SSSCA1-207ENST00000533115 CCDC54Q8NEL0 328 aa24.98■■□□□ 1.59
SSSCA1-207ENST00000533115 H1FXQ92522 213 aaKnown RBP24.98■■□□□ 1.59
SSSCA1-207ENST00000533115 PRDM13Q9H4Q3 707 aa24.98■■□□□ 1.59
SSSCA1-207ENST00000533115 ONECUT1Q9UBC0 465 aa24.98■■□□□ 1.59
SSSCA1-207ENST00000533115 AASSQ9UDR5 926 aa24.98■■□□□ 1.59
SSSCA1-207ENST00000533115 ZNF222Q9UK12 451 aa24.98■■□□□ 1.59
SSSCA1-207ENST00000533115 DAPL1A0PJW8 107 aa24.97■■□□□ 1.59
SSSCA1-207ENST00000533115 ANKRD61A6NGH8 418 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms