RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 SLC25A2Q9BXI2 301 aa3.22□□□□□ -1.89
AC055878.1-201ENST00000531858 SLC25A39Q9BZJ4 359 aaPredicted RBP3.22□□□□□ -1.89
AC055878.1-201ENST00000531858 METTL9Q9H1A3 318 aa3.22□□□□□ -1.89
AC055878.1-201ENST00000531858 POMKQ9H5K3 350 aa3.22□□□□□ -1.89
AC055878.1-201ENST00000531858 SLC2A9Q9NRM0 540 aa3.22□□□□□ -1.89
AC055878.1-201ENST00000531858 HEBP1Q9NRV9 189 aa3.22□□□□□ -1.89
AC055878.1-201ENST00000531858 UVRAGQ9P2Y5 699 aa3.22□□□□□ -1.89
AC055878.1-201ENST00000531858 RNF7Q9UBF6 113 aa3.22□□□□□ -1.89
AC055878.1-201ENST00000531858 NDRG2Q9UN36 371 aaKnown RBP3.22□□□□□ -1.89
AC055878.1-201ENST00000531858 PALLDQ8WX93 1383 aa3.22□□□□□ -1.89
AC055878.1-201ENST00000531858 POGZQ7Z3K3 1410 aa3.21□□□□□ -1.9
AC055878.1-201ENST00000531858 TINCRA0A1B0GVN0 87 aa3.21□□□□□ -1.9
AC055878.1-201ENST00000531858 NDUFAF8A1L188 74 aa3.21□□□□□ -1.9
AC055878.1-201ENST00000531858 ENTPD6O75354 484 aa3.21□□□□□ -1.9
AC055878.1-201ENST00000531858 GLSO94925 669 aaPredicted RBP3.21□□□□□ -1.9
AC055878.1-201ENST00000531858 CTDNEP1O95476 244 aa3.21□□□□□ -1.9
AC055878.1-201ENST00000531858 IGHV3-13P01766 116 aa3.21□□□□□ -1.9
AC055878.1-201ENST00000531858 RPS17P08708 135 aaKnown RBP3.21□□□□□ -1.9
AC055878.1-201ENST00000531858 TSPOP30536 169 aa3.21□□□□□ -1.9
AC055878.1-201ENST00000531858 MEOX2P50222 304 aa3.21□□□□□ -1.9
AC055878.1-201ENST00000531858 CXCR4P61073 352 aa3.21□□□□□ -1.9
AC055878.1-201ENST00000531858 SARNPP82979 210 aaKnown RBP3.21□□□□□ -1.9
AC055878.1-201ENST00000531858 IFITM3Q01628 133 aa3.21□□□□□ -1.9
AC055878.1-201ENST00000531858 CDC20Q12834 499 aa3.21□□□□□ -1.9
AC055878.1-201ENST00000531858 RGNQ15493 299 aa3.21□□□□□ -1.9
AC055878.1-201ENST00000531858 GSG1Q2KHT4 349 aa3.21□□□□□ -1.9
AC055878.1-201ENST00000531858 CLEC12AQ5QGZ9 265 aa3.21□□□□□ -1.9
AC055878.1-201ENST00000531858 FAM162BQ5T6X4 162 aa3.21□□□□□ -1.9
AC055878.1-201ENST00000531858 KCTD16Q68DU8 428 aa3.21□□□□□ -1.9
AC055878.1-201ENST00000531858 CGB2Q6NT52 195 aa3.21□□□□□ -1.9
AC055878.1-201ENST00000531858 LINC00173Q6ZV60 143 aa3.21□□□□□ -1.9
AC055878.1-201ENST00000531858 TRAPPC5Q8IUR0 188 aa3.21□□□□□ -1.9
AC055878.1-201ENST00000531858 WDFY1Q8IWB7 410 aa3.21□□□□□ -1.9
AC055878.1-201ENST00000531858 LGI3Q8N145 548 aa3.21□□□□□ -1.9
AC055878.1-201ENST00000531858 STK40Q8N2I9 435 aa3.21□□□□□ -1.9
AC055878.1-201ENST00000531858 RAB8BQ92930 207 aa3.21□□□□□ -1.9
AC055878.1-201ENST00000531858 TLCD1Q96CP7 247 aa3.21□□□□□ -1.9
AC055878.1-201ENST00000531858 MRPL48Q96GC5 212 aaKnown RBP3.21□□□□□ -1.9
AC055878.1-201ENST00000531858 ZNF599Q96NL3 588 aa3.21□□□□□ -1.9
AC055878.1-201ENST00000531858 UBXN6Q9BZV1 441 aa3.21□□□□□ -1.9
AC055878.1-201ENST00000531858 STOML2Q9UJZ1 356 aa3.21□□□□□ -1.9
AC055878.1-201ENST00000531858 MOB4Q9Y3A3 225 aa3.21□□□□□ -1.9
AC055878.1-201ENST00000531858 ORC6Q9Y5N6 252 aa3.21□□□□□ -1.9
AC055878.1-201ENST00000531858 PLEKHG1Q9ULL1 1385 aa3.21□□□□□ -1.9
AC055878.1-201ENST00000531858 RIMS2Q9UQ26 1411 aa3.2□□□□□ -1.9
AC055878.1-201ENST00000531858 IGKV2D-30A0A075B6S6 120 aa3.2□□□□□ -1.9
AC055878.1-201ENST00000531858 TRAV8-6A0A0B4J262 113 aa3.2□□□□□ -1.9
AC055878.1-201ENST00000531858 IGHV1-69DA0A0B4J2H0 117 aa3.2□□□□□ -1.9
AC055878.1-201ENST00000531858 DAPL1A0PJW8 107 aa3.2□□□□□ -1.9
AC055878.1-201ENST00000531858 H7C423 109 aa3.2□□□□□ -1.9
AC055878.1-201ENST00000531858 I3L4J1 428 aa3.2□□□□□ -1.9
AC055878.1-201ENST00000531858 HAT1O14929 419 aa3.2□□□□□ -1.9
AC055878.1-201ENST00000531858 AZIN1O14977 448 aa3.2□□□□□ -1.9
AC055878.1-201ENST00000531858 VAMP5O95183 116 aa3.2□□□□□ -1.9
AC055878.1-201ENST00000531858 KRT75O95678 551 aa3.2□□□□□ -1.9
AC055878.1-201ENST00000531858 HLA-DRAP01903 254 aa3.2□□□□□ -1.9
AC055878.1-201ENST00000531858 IFNA16P05015 189 aa3.2□□□□□ -1.9
AC055878.1-201ENST00000531858 ZNF17P17021 662 aa3.2□□□□□ -1.9
AC055878.1-201ENST00000531858 MYL12AP19105 171 aa3.2□□□□□ -1.9
AC055878.1-201ENST00000531858 PSMB1P20618 241 aaKnown RBP3.2□□□□□ -1.9
AC055878.1-201ENST00000531858 FUT3P21217 361 aa3.2□□□□□ -1.9
AC055878.1-201ENST00000531858 OMGP23515 440 aa3.2□□□□□ -1.9
AC055878.1-201ENST00000531858 GABRR1P24046 479 aa3.2□□□□□ -1.9
AC055878.1-201ENST00000531858 GGT2P36268 569 aa3.2□□□□□ -1.9
AC055878.1-201ENST00000531858 IFNGR2P38484 337 aa3.2□□□□□ -1.9
AC055878.1-201ENST00000531858 CDKN2BP42772 138 aa3.2□□□□□ -1.9
AC055878.1-201ENST00000531858 KIR3DL2P43630 455 aa3.2□□□□□ -1.9
AC055878.1-201ENST00000531858 HSPA13P48723 471 aa3.2□□□□□ -1.9
AC055878.1-201ENST00000531858 SERPINB9P50453 376 aa3.2□□□□□ -1.9
AC055878.1-201ENST00000531858 NCBP2P52298 156 aaKnown RBP eCLIP3.2□□□□□ -1.9
AC055878.1-201ENST00000531858 CLDN12P56749 244 aa3.2□□□□□ -1.9
AC055878.1-201ENST00000531858 LSM6P62312 80 aaKnown RBP3.2□□□□□ -1.9
AC055878.1-201ENST00000531858 SLC7A9P82251 487 aa3.2□□□□□ -1.9
AC055878.1-201ENST00000531858 MS4A2Q01362 244 aa3.2□□□□□ -1.9
AC055878.1-201ENST00000531858 LAMTOR4Q0VGL1 99 aa3.2□□□□□ -1.9
AC055878.1-201ENST00000531858 SRSF6Q13247 344 aaKnown RBP3.2□□□□□ -1.9
AC055878.1-201ENST00000531858 GUCA2BQ16661 112 aa3.2□□□□□ -1.9
AC055878.1-201ENST00000531858 Q1RN00 199 aa3.2□□□□□ -1.9
AC055878.1-201ENST00000531858 HLA-DRB5Q30154 266 aa3.2□□□□□ -1.9
AC055878.1-201ENST00000531858 ARL9Q6T311 187 aa3.2□□□□□ -1.9
AC055878.1-201ENST00000531858 CASP12Q6UXS9 341 aa3.2□□□□□ -1.9
AC055878.1-201ENST00000531858 FBXW12Q6X9E4 464 aa3.2□□□□□ -1.9
AC055878.1-201ENST00000531858 RNF165Q6ZSG1 346 aa3.2□□□□□ -1.9
AC055878.1-201ENST00000531858 TMEM179BQ7Z7N9 219 aa3.2□□□□□ -1.9
AC055878.1-201ENST00000531858 RIMKLAQ8IXN7 391 aa3.2□□□□□ -1.9
AC055878.1-201ENST00000531858 NPBQ8NG41 125 aa3.2□□□□□ -1.9
AC055878.1-201ENST00000531858 C16orf78Q8WTQ4 265 aa3.2□□□□□ -1.9
AC055878.1-201ENST00000531858 BLNKQ8WV28 456 aa3.2□□□□□ -1.9
AC055878.1-201ENST00000531858 TESCQ96BS2 214 aa3.2□□□□□ -1.9
AC055878.1-201ENST00000531858 LRRC58Q96CX6 371 aa3.2□□□□□ -1.9
AC055878.1-201ENST00000531858 METTL26Q96S19 204 aa3.2□□□□□ -1.9
AC055878.1-201ENST00000531858 SUCNR1Q9BXA5 334 aa3.2□□□□□ -1.9
AC055878.1-201ENST00000531858 BCL2L14Q9BZR8 327 aa3.2□□□□□ -1.9
AC055878.1-201ENST00000531858 CLMPQ9H6B4 373 aa3.2□□□□□ -1.9
AC055878.1-201ENST00000531858 TMEM27Q9HBJ8 222 aa3.2□□□□□ -1.9
AC055878.1-201ENST00000531858 FKBP14Q9NWM8 211 aa3.2□□□□□ -1.9
AC055878.1-201ENST00000531858 FAM206AQ9NX38 181 aa3.2□□□□□ -1.9
AC055878.1-201ENST00000531858 ZNF226Q9NYT6 803 aa3.2□□□□□ -1.9
AC055878.1-201ENST00000531858 SIGLEC7Q9Y286 467 aa3.2□□□□□ -1.9
AC055878.1-201ENST00000531858 F11RQ9Y624 299 aaKnown RBP3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms