RNA–Protein interactions for RNA: ENST00000531709.6

NXF1-211, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best) BASIC

Gene NXF1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-211ENST00000531709 HIST1H2AAQ96QV6 131 aa10□□□□□ -0.81
NXF1-211ENST00000531709 MAGT1Q9H0U3 335 aa10□□□□□ -0.81
NXF1-211ENST00000531709 MYOTQ9UBF9 498 aa10□□□□□ -0.81
NXF1-211ENST00000531709 HSPA12AO43301 675 aa10□□□□□ -0.81
NXF1-211ENST00000531709 RBMXL2O75526 392 aaKnown RBP10□□□□□ -0.81
NXF1-211ENST00000531709 MSX1P28360 303 aa10□□□□□ -0.81
NXF1-211ENST00000531709 S100GP29377 79 aa10□□□□□ -0.81
NXF1-211ENST00000531709 RPS18P62269 152 aaKnown RBP10□□□□□ -0.81
NXF1-211ENST00000531709 MALLQ13021 153 aa10□□□□□ -0.81
NXF1-211ENST00000531709 PNLIPRP3Q17RR3 467 aa10□□□□□ -0.81
NXF1-211ENST00000531709 SOHLH1Q5JUK2 328 aa10□□□□□ -0.81
NXF1-211ENST00000531709 UMAD1C9J7I0 102 aa10□□□□□ -0.81
NXF1-211ENST00000531709 TAAR5O14804 337 aa10□□□□□ -0.81
NXF1-211ENST00000531709 RAMP1O60894 148 aa10□□□□□ -0.81
NXF1-211ENST00000531709 EIF2S3LQ2VIR3 472 aaKnown RBP10□□□□□ -0.81
NXF1-211ENST00000531709 FAM166AQ6J272 317 aa10□□□□□ -0.81
NXF1-211ENST00000531709 C1QL2Q7Z5L3 287 aa10□□□□□ -0.81
NXF1-211ENST00000531709 EIF4E3Q8N5X7 224 aaKnown RBP10□□□□□ -0.81
NXF1-211ENST00000531709 MRPL24Q96A35 216 aaKnown RBP10□□□□□ -0.81
NXF1-211ENST00000531709 ZDBF2Q9HCK1 2354 aa10□□□□□ -0.81
NXF1-211ENST00000531709 PRSS44E7EML9 344 aa9.99□□□□□ -0.81
NXF1-211ENST00000531709 H0YIZ8 118 aa9.99□□□□□ -0.81
NXF1-211ENST00000531709 ARG1P05089 322 aa9.99□□□□□ -0.81
NXF1-211ENST00000531709 AKR7LQ8NHP1 331 aa9.99□□□□□ -0.81
NXF1-211ENST00000531709 NRIP2Q9BQI9 281 aa9.99□□□□□ -0.81
NXF1-211ENST00000531709 RSRP1Q9BUV0 290 aa9.99□□□□□ -0.81
NXF1-211ENST00000531709 PECRQ9BY49 303 aa9.99□□□□□ -0.81
NXF1-211ENST00000531709 NECAP2Q9NVZ3 263 aa9.99□□□□□ -0.81
NXF1-211ENST00000531709 C1QL1O75973 258 aa9.99□□□□□ -0.81
NXF1-211ENST00000531709 CST4P01036 141 aa9.99□□□□□ -0.81
NXF1-211ENST00000531709 CD37P11049 281 aa9.99□□□□□ -0.81
NXF1-211ENST00000531709 SPINK2P20155 84 aa9.99□□□□□ -0.81
NXF1-211ENST00000531709 YRDCQ86U90 279 aaKnown RBP9.99□□□□□ -0.81
NXF1-211ENST00000531709 STX12Q86Y82 276 aa9.99□□□□□ -0.81
NXF1-211ENST00000531709 SERPINE3A8MV23 424 aa9.99□□□□□ -0.81
NXF1-211ENST00000531709 OR5AC1P0C628 307 aa9.99□□□□□ -0.81
NXF1-211ENST00000531709 OTX2P32243 289 aa9.99□□□□□ -0.81
NXF1-211ENST00000531709 LPAR6P43657 344 aa9.99□□□□□ -0.81
NXF1-211ENST00000531709 TMEM50BP56557 158 aa9.99□□□□□ -0.81
NXF1-211ENST00000531709 PABPC1L2AQ5JQF8 200 aa9.99□□□□□ -0.81
NXF1-211ENST00000531709 ETV3LQ6ZN32 361 aa9.99□□□□□ -0.81
NXF1-211ENST00000531709 FAM24BQ8N5W8 94 aa9.99□□□□□ -0.81
NXF1-211ENST00000531709 ALKBH3Q96Q83 286 aaPredicted RBP9.99□□□□□ -0.81
NXF1-211ENST00000531709 SEC11CQ9BY50 192 aa9.99□□□□□ -0.81
NXF1-211ENST00000531709 ZNF286AQ9HBT8 521 aa9.99□□□□□ -0.81
NXF1-211ENST00000531709 KPTNQ9Y664 436 aa9.99□□□□□ -0.81
NXF1-211ENST00000531709 ARPC4-TTLL3A0A0A6YYG9 625 aa9.98□□□□□ -0.81
NXF1-211ENST00000531709 NUDT19A8MXV4 375 aa9.98□□□□□ -0.81
NXF1-211ENST00000531709 ST8SIA3O43173 380 aa9.98□□□□□ -0.81
NXF1-211ENST00000531709 NPIPB7O75200 414 aa9.98□□□□□ -0.81
NXF1-211ENST00000531709 GLULP15104 373 aa9.98□□□□□ -0.81
NXF1-211ENST00000531709 B4GALT1P15291 398 aa9.98□□□□□ -0.81
NXF1-211ENST00000531709 S100A2P29034 98 aa9.98□□□□□ -0.81
NXF1-211ENST00000531709 RFC3P40938 356 aa9.98□□□□□ -0.81
NXF1-211ENST00000531709 EIF1P41567 113 aaKnown RBP9.98□□□□□ -0.81
NXF1-211ENST00000531709 P2RY4P51582 365 aa9.98□□□□□ -0.81
NXF1-211ENST00000531709 CNN3Q15417 329 aaKnown RBP9.98□□□□□ -0.81
NXF1-211ENST00000531709 ZNF674Q2M3X9 581 aa9.98□□□□□ -0.81
NXF1-211ENST00000531709 RPUSD3Q6P087 351 aaKnown RBP9.98□□□□□ -0.81
NXF1-211ENST00000531709 OPN5Q6U736 354 aa9.98□□□□□ -0.81
NXF1-211ENST00000531709 PLXDC2Q6UX71 529 aa9.98□□□□□ -0.81
NXF1-211ENST00000531709 SLC16A14Q7RTX9 510 aa9.98□□□□□ -0.81
NXF1-211ENST00000531709 NUP210Q8TEM1 1887 aaPredicted RBP9.98□□□□□ -0.81
NXF1-211ENST00000531709 IL1F10Q8WWZ1 152 aa9.98□□□□□ -0.81
NXF1-211ENST00000531709 OIT3Q8WWZ8 545 aa9.98□□□□□ -0.81
NXF1-211ENST00000531709 ZNF285Q96NJ3 590 aa9.98□□□□□ -0.81
NXF1-211ENST00000531709 CLCC1Q96S66 551 aa9.98□□□□□ -0.81
NXF1-211ENST00000531709 PIGQQ9BRB3 760 aa9.98□□□□□ -0.81
NXF1-211ENST00000531709 RNF126Q9BV68 326 aa9.98□□□□□ -0.81
NXF1-211ENST00000531709 SLC2A8Q9NY64 477 aa9.98□□□□□ -0.81
NXF1-211ENST00000531709 IGKV3D-11A0A0A0MRZ8 115 aa9.98□□□□□ -0.81
NXF1-211ENST00000531709 TMEM14DPA8MWL7 114 aa9.98□□□□□ -0.81
NXF1-211ENST00000531709 DHHO43323 396 aa9.98□□□□□ -0.81
NXF1-211ENST00000531709 HPNP05981 417 aa9.98□□□□□ -0.81
NXF1-211ENST00000531709 NQO2P16083 231 aa9.98□□□□□ -0.81
NXF1-211ENST00000531709 RBP2P50120 134 aa9.98□□□□□ -0.81
NXF1-211ENST00000531709 EFNA3P52797 238 aa9.98□□□□□ -0.81
NXF1-211ENST00000531709 RHEBQ15382 184 aa9.98□□□□□ -0.81
NXF1-211ENST00000531709 GUK1Q16774 197 aa9.98□□□□□ -0.81
NXF1-211ENST00000531709 HAGHQ16775 308 aa9.98□□□□□ -0.81
NXF1-211ENST00000531709 FBXL14Q8N1E6 418 aa9.98□□□□□ -0.81
NXF1-211ENST00000531709 D2HGDHQ8N465 521 aa9.98□□□□□ -0.81
NXF1-211ENST00000531709 CCDC71LQ8N9Z2 235 aa9.98□□□□□ -0.81
NXF1-211ENST00000531709 ZFP62Q8NB50 900 aaPredicted RBP9.98□□□□□ -0.81
NXF1-211ENST00000531709 OR8U1Q8NH10 309 aa9.98□□□□□ -0.81
NXF1-211ENST00000531709 TCTEX1D2Q8WW35 142 aa9.98□□□□□ -0.81
NXF1-211ENST00000531709 SPACA9Q96E40 222 aaPredicted RBP9.98□□□□□ -0.81
NXF1-211ENST00000531709 UCN2Q96RP3 112 aa9.98□□□□□ -0.81
NXF1-211ENST00000531709 EDEM2Q9BV94 578 aa9.98□□□□□ -0.81
NXF1-211ENST00000531709 FIGNL2A6NMB9 653 aa9.98□□□□□ -0.81
NXF1-211ENST00000531709 FTCDNL1E5RQL4 147 aa9.98□□□□□ -0.81
NXF1-211ENST00000531709 TNFSF11O14788 317 aa9.98□□□□□ -0.81
NXF1-211ENST00000531709 ZNHIT1O43257 154 aa9.98□□□□□ -0.81
NXF1-211ENST00000531709 SMAD4Q13485 552 aaKnown RBP9.98□□□□□ -0.81
NXF1-211ENST00000531709 TGIF1Q15583 401 aa9.98□□□□□ -0.81
NXF1-211ENST00000531709 TMEM268Q5VZI3 342 aa9.98□□□□□ -0.81
NXF1-211ENST00000531709 MAML2Q8IZL2 1156 aaPredicted RBP9.98□□□□□ -0.81
NXF1-211ENST00000531709 SFT2D1Q8WV19 159 aa9.98□□□□□ -0.81
NXF1-211ENST00000531709 PAPOLGQ9BWT3 736 aaKnown RBP9.98□□□□□ -0.81
NXF1-211ENST00000531709 SLC26A1Q9H2B4 701 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms