RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 CPLX4Q7Z7G2 160 aa6.47□□□□□ -1.37
CD44-232ENST00000531118 FUNDC1Q8IVP5 155 aa6.47□□□□□ -1.37
CD44-232ENST00000531118 MREGQ8N565 214 aa6.47□□□□□ -1.37
CD44-232ENST00000531118 OR11H6Q8NGC7 330 aa6.47□□□□□ -1.37
CD44-232ENST00000531118 OR8U1Q8NH10 309 aa6.47□□□□□ -1.37
CD44-232ENST00000531118 RPL3LQ92901 407 aaKnown RBP6.47□□□□□ -1.37
CD44-232ENST00000531118 SPTSSAQ969W0 71 aa6.47□□□□□ -1.37
CD44-232ENST00000531118 SDSLQ96GA7 329 aa6.47□□□□□ -1.37
CD44-232ENST00000531118 PRRC1Q96M27 445 aa6.47□□□□□ -1.37
CD44-232ENST00000531118 TMEM109Q9BVC6 243 aa6.47□□□□□ -1.37
CD44-232ENST00000531118 PAPOLGQ9BWT3 736 aaKnown RBP6.47□□□□□ -1.37
CD44-232ENST00000531118 PARD6BQ9BYG5 372 aa6.47□□□□□ -1.37
CD44-232ENST00000531118 PPP1R3EQ9H7J1 279 aa6.47□□□□□ -1.37
CD44-232ENST00000531118 NMNAT1Q9HAN9 279 aaPredicted RBP6.47□□□□□ -1.37
CD44-232ENST00000531118 ZFP57Q9NU63 452 aa6.47□□□□□ -1.37
CD44-232ENST00000531118 VNN3Q9NY84 501 aa6.47□□□□□ -1.37
CD44-232ENST00000531118 LYVE1Q9Y5Y7 322 aa6.47□□□□□ -1.37
CD44-232ENST00000531118 hCG_38984A0A1B0GV85 526 aa6.46□□□□□ -1.38
CD44-232ENST00000531118 LDLRAD4O15165 306 aa6.46□□□□□ -1.38
CD44-232ENST00000531118 SLC2A1P11166 492 aa6.46□□□□□ -1.38
CD44-232ENST00000531118 PSG2P11465 335 aa6.46□□□□□ -1.38
CD44-232ENST00000531118 GLRA1P23415 457 aa6.46□□□□□ -1.38
CD44-232ENST00000531118 CD24P25063 80 aa6.46□□□□□ -1.38
CD44-232ENST00000531118 CRABP1P29762 137 aa6.46□□□□□ -1.38
CD44-232ENST00000531118 DDOSTP39656 456 aa6.46□□□□□ -1.38
CD44-232ENST00000531118 MRPL19P49406 292 aaKnown RBP6.46□□□□□ -1.38
CD44-232ENST00000531118 PRKCDQ05655 676 aa6.46□□□□□ -1.38
CD44-232ENST00000531118 ST3GAL3Q11203 375 aa6.46□□□□□ -1.38
CD44-232ENST00000531118 DYNC1I2Q13409 638 aaKnown RBP6.46□□□□□ -1.38
CD44-232ENST00000531118 SEC23BQ15437 767 aa6.46□□□□□ -1.38
CD44-232ENST00000531118 KRT71Q3SY84 523 aa6.46□□□□□ -1.38
CD44-232ENST00000531118 ZNF260Q3ZCT1 412 aa6.46□□□□□ -1.38
CD44-232ENST00000531118 SLC36A3Q495N2 470 aa6.46□□□□□ -1.38
CD44-232ENST00000531118 MINOS1Q5TGZ0 78 aa6.46□□□□□ -1.38
CD44-232ENST00000531118 AGBL2Q5U5Z8 902 aa6.46□□□□□ -1.38
CD44-232ENST00000531118 GPR139Q6DWJ6 353 aa6.46□□□□□ -1.38
CD44-232ENST00000531118 DRAM2Q6UX65 266 aa6.46□□□□□ -1.38
CD44-232ENST00000531118 CCDC80Q76M96 950 aa6.46□□□□□ -1.38
CD44-232ENST00000531118 SLC16A9Q7RTY1 509 aa6.46□□□□□ -1.38
CD44-232ENST00000531118 DHDDSQ86SQ9 333 aa6.46□□□□□ -1.38
CD44-232ENST00000531118 OFCC1Q8IZS5 231 aa6.46□□□□□ -1.38
CD44-232ENST00000531118 CYB561A3Q8NBI2 242 aa6.46□□□□□ -1.38
CD44-232ENST00000531118 OR4M1Q8NGD0 313 aa6.46□□□□□ -1.38
CD44-232ENST00000531118 OR2AJ1Q8NGZ0 328 aa6.46□□□□□ -1.38
CD44-232ENST00000531118 NDNFQ8TB73 568 aa6.46□□□□□ -1.38
CD44-232ENST00000531118 GATAD1Q8WUU5 269 aa6.46□□□□□ -1.38
CD44-232ENST00000531118 SPSB4Q96A44 273 aa6.46□□□□□ -1.38
CD44-232ENST00000531118 GPX7Q96SL4 187 aaPredicted RBP6.46□□□□□ -1.38
CD44-232ENST00000531118 MICU1Q9BPX6 476 aa6.46□□□□□ -1.38
CD44-232ENST00000531118 RTL8AQ9BWD3 113 aa6.46□□□□□ -1.38
CD44-232ENST00000531118 FGF23Q9GZV9 251 aaPredicted RBP6.46□□□□□ -1.38
CD44-232ENST00000531118 TBC1D23Q9NUY8 699 aa6.46□□□□□ -1.38
CD44-232ENST00000531118 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.46□□□□□ -1.38
CD44-232ENST00000531118 CYB5R1Q9UHQ9 305 aa6.46□□□□□ -1.38
CD44-232ENST00000531118 A4GNTQ9UNA3 340 aa6.46□□□□□ -1.38
CD44-232ENST00000531118 MINOS1-NBL1R4GNA1 71 aa6.46□□□□□ -1.38
CD44-232ENST00000531118 V9GYY5 206 aaPredicted RBP6.46□□□□□ -1.38
CD44-232ENST00000531118 VPS13DQ5THJ4 4388 aa6.46□□□□□ -1.38
CD44-232ENST00000531118 TMEM210A6NLX4 147 aa6.45□□□□□ -1.38
CD44-232ENST00000531118 ANXA2P2A6NMY6 339 aa6.45□□□□□ -1.38
CD44-232ENST00000531118 C17orf98A8MV24 154 aa6.45□□□□□ -1.38
CD44-232ENST00000531118 H3BUI4 141 aa6.45□□□□□ -1.38
CD44-232ENST00000531118 RBP4P02753 201 aa6.45□□□□□ -1.38
CD44-232ENST00000531118 TROVE2P10155 538 aaKnown RBP eCLIP6.45□□□□□ -1.38
CD44-232ENST00000531118 PIPP12273 146 aaPredicted RBP6.45□□□□□ -1.38
CD44-232ENST00000531118 OR1E2P47887 323 aa6.45□□□□□ -1.38
CD44-232ENST00000531118 FAM3AP98173 230 aa6.45□□□□□ -1.38
CD44-232ENST00000531118 ZBED5Q49AG3 693 aa6.45□□□□□ -1.38
CD44-232ENST00000531118 DLEU7Q6UYE1 221 aa6.45□□□□□ -1.38
CD44-232ENST00000531118 SATL1Q86VE3 508 aa6.45□□□□□ -1.38
CD44-232ENST00000531118 ZDHHC21Q8IVQ6 265 aa6.45□□□□□ -1.38
CD44-232ENST00000531118 CHPT1Q8WUD6 406 aa6.45□□□□□ -1.38
CD44-232ENST00000531118 HPSE2Q8WWQ2 592 aa6.45□□□□□ -1.38
CD44-232ENST00000531118 NOL4LQ96MY1 436 aaPredicted RBP6.45□□□□□ -1.38
CD44-232ENST00000531118 RBM14Q96PK6 669 aaKnown RBP6.45□□□□□ -1.38
CD44-232ENST00000531118 COPS4Q9BT78 406 aa6.45□□□□□ -1.38
CD44-232ENST00000531118 YY1AP1Q9H869 796 aa6.45□□□□□ -1.38
CD44-232ENST00000531118 ISYNA1Q9NPH2 558 aa6.45□□□□□ -1.38
CD44-232ENST00000531118 NRIP3Q9NQ35 241 aa6.45□□□□□ -1.38
CD44-232ENST00000531118 BAG5Q9UL15 447 aa6.45□□□□□ -1.38
CD44-232ENST00000531118 RAB21Q9UL25 225 aa6.45□□□□□ -1.38
CD44-232ENST00000531118 FAT2Q9NYQ8 4349 aa6.44□□□□□ -1.38
CD44-232ENST00000531118 IGHV2-26A0A0B4J1V2 119 aa6.44□□□□□ -1.38
CD44-232ENST00000531118 TRIM64CA6NLI5 447 aa6.44□□□□□ -1.38
CD44-232ENST00000531118 PRR23D1E9PI22 279 aaPredicted RBP6.44□□□□□ -1.38
CD44-232ENST00000531118 SNNO75324 88 aaPredicted RBP6.44□□□□□ -1.38
CD44-232ENST00000531118 NDUFB2O95178 105 aa6.44□□□□□ -1.38
CD44-232ENST00000531118 TXNDC12O95881 172 aa6.44□□□□□ -1.38
CD44-232ENST00000531118 PRR23D2P0DMB1 279 aaPredicted RBP6.44□□□□□ -1.38
CD44-232ENST00000531118 PSKH1P11801 424 aa6.44□□□□□ -1.38
CD44-232ENST00000531118 DCTDP32321 178 aa6.44□□□□□ -1.38
CD44-232ENST00000531118 RPS27P42677 84 aaKnown RBP6.44□□□□□ -1.38
CD44-232ENST00000531118 CDKN2AP42771 156 aaKnown RBP6.44□□□□□ -1.38
CD44-232ENST00000531118 PRKXP51817 358 aa6.44□□□□□ -1.38
CD44-232ENST00000531118 SLC7A2P52569 658 aa6.44□□□□□ -1.38
CD44-232ENST00000531118 SLC18A1P54219 525 aa6.44□□□□□ -1.38
CD44-232ENST00000531118 IL18R1Q13478 541 aa6.44□□□□□ -1.38
CD44-232ENST00000531118 FHL3Q13643 280 aa6.44□□□□□ -1.38
CD44-232ENST00000531118 SNAPC1Q16533 368 aa6.44□□□□□ -1.38
CD44-232ENST00000531118 MLANAQ16655 118 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms