RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 UBDO15205 165 aa5.41□□□□□ -1.54
CSDE1-213ENST00000530784 PPIHO43447 177 aaKnown RBP5.41□□□□□ -1.54
CSDE1-213ENST00000530784 SNNO75324 88 aaPredicted RBP5.41□□□□□ -1.54
CSDE1-213ENST00000530784 ENTPD5O75356 428 aa5.41□□□□□ -1.54
CSDE1-213ENST00000530784 PNPP00491 289 aa5.41□□□□□ -1.54
CSDE1-213ENST00000530784 BGLAPP02818 100 aa5.41□□□□□ -1.54
CSDE1-213ENST00000530784 AHCYP23526 432 aa5.41□□□□□ -1.54
CSDE1-213ENST00000530784 COL8A2P25067 703 aa5.41□□□□□ -1.54
CSDE1-213ENST00000530784 CSNK1A1P48729 337 aa5.41□□□□□ -1.54
CSDE1-213ENST00000530784 AQP5P55064 265 aa5.41□□□□□ -1.54
CSDE1-213ENST00000530784 TMEM33P57088 247 aa5.41□□□□□ -1.54
CSDE1-213ENST00000530784 RGS8P57771 180 aaPredicted RBP5.41□□□□□ -1.54
CSDE1-213ENST00000530784 STX1BP61266 288 aa5.41□□□□□ -1.54
CSDE1-213ENST00000530784 MRPS11P82912 194 aaKnown RBP5.41□□□□□ -1.54
CSDE1-213ENST00000530784 DHODHQ02127 395 aa5.41□□□□□ -1.54
CSDE1-213ENST00000530784 PUDPQ08623 228 aa5.41□□□□□ -1.54
CSDE1-213ENST00000530784 MS4A18Q3C1V0 323 aa5.41□□□□□ -1.54
CSDE1-213ENST00000530784 TNFAIP8L3Q5GJ75 292 aa5.41□□□□□ -1.54
CSDE1-213ENST00000530784 FAHD2BQ6P2I3 314 aaPredicted RBP5.41□□□□□ -1.54
CSDE1-213ENST00000530784 DHRS4L2Q6PKH6 230 aa5.41□□□□□ -1.54
CSDE1-213ENST00000530784 CROCCP2Q86T23 111 aa5.41□□□□□ -1.54
CSDE1-213ENST00000530784 COMTD1Q86VU5 262 aa5.41□□□□□ -1.54
CSDE1-213ENST00000530784 RANBP3LQ86VV4 465 aaPredicted RBP5.41□□□□□ -1.54
CSDE1-213ENST00000530784 LRP11Q86VZ4 500 aa5.41□□□□□ -1.54
CSDE1-213ENST00000530784 CARM1Q86X55 608 aa5.41□□□□□ -1.54
CSDE1-213ENST00000530784 GTF2H4Q92759 462 aa5.41□□□□□ -1.54
CSDE1-213ENST00000530784 YIPF5Q969M3 257 aa5.41□□□□□ -1.54
CSDE1-213ENST00000530784 FAHD2AQ96GK7 314 aa5.41□□□□□ -1.54
CSDE1-213ENST00000530784 ZNF75AQ96N20 296 aa5.41□□□□□ -1.54
CSDE1-213ENST00000530784 OR52B2Q96RD2 323 aa5.41□□□□□ -1.54
CSDE1-213ENST00000530784 RACGAP1Q9H0H5 632 aa5.41□□□□□ -1.54
CSDE1-213ENST00000530784 ZNF385DQ9H6B1 395 aa5.41□□□□□ -1.54
CSDE1-213ENST00000530784 TMEM27Q9HBJ8 222 aa5.41□□□□□ -1.54
CSDE1-213ENST00000530784 ZNF275Q9NSD4 429 aaPredicted RBP5.41□□□□□ -1.54
CSDE1-213ENST00000530784 MRPL39Q9NYK5 338 aaKnown RBP5.41□□□□□ -1.54
CSDE1-213ENST00000530784 TREM2Q9NZC2 230 aa5.41□□□□□ -1.54
CSDE1-213ENST00000530784 MYEF2Q9P2K5 600 aaKnown RBP5.41□□□□□ -1.54
CSDE1-213ENST00000530784 FZR1Q9UM11 496 aa5.41□□□□□ -1.54
CSDE1-213ENST00000530784 V9GYY5 206 aaPredicted RBP5.41□□□□□ -1.54
CSDE1-213ENST00000530784 A0A0B4J2E0 115 aa5.4□□□□□ -1.54
CSDE1-213ENST00000530784 A0A1B0GX12 115 aa5.4□□□□□ -1.54
CSDE1-213ENST00000530784 TMEM120BA0PK00 339 aa5.4□□□□□ -1.54
CSDE1-213ENST00000530784 A8MXK9 166 aa5.4□□□□□ -1.54
CSDE1-213ENST00000530784 LRRN3E7EW58 273 aa5.4□□□□□ -1.54
CSDE1-213ENST00000530784 TPST1O60507 370 aa5.4□□□□□ -1.54
CSDE1-213ENST00000530784 PRAF2O60831 178 aa5.4□□□□□ -1.54
CSDE1-213ENST00000530784 SERPINB7O75635 380 aa5.4□□□□□ -1.54
CSDE1-213ENST00000530784 RP2O75695 350 aa5.4□□□□□ -1.54
CSDE1-213ENST00000530784 OR6A2O95222 327 aa5.4□□□□□ -1.54
CSDE1-213ENST00000530784 FARS2O95363 451 aaKnown RBP5.4□□□□□ -1.54
CSDE1-213ENST00000530784 MT-ATP6P00846 226 aa5.4□□□□□ -1.54
CSDE1-213ENST00000530784 SERPINA5P05154 406 aa5.4□□□□□ -1.54
CSDE1-213ENST00000530784 ADORA3P0DMS8 318 aa5.4□□□□□ -1.54
CSDE1-213ENST00000530784 ANPEPP15144 967 aa5.4□□□□□ -1.54
CSDE1-213ENST00000530784 AADACP22760 399 aa5.4□□□□□ -1.54
CSDE1-213ENST00000530784 PPIBP23284 216 aaKnown RBP5.4□□□□□ -1.54
CSDE1-213ENST00000530784 AQP1P29972 269 aa5.4□□□□□ -1.54
CSDE1-213ENST00000530784 MAGEB1P43366 347 aa5.4□□□□□ -1.54
CSDE1-213ENST00000530784 BIDP55957 195 aa5.4□□□□□ -1.54
CSDE1-213ENST00000530784 CDK6Q00534 326 aa5.4□□□□□ -1.54
CSDE1-213ENST00000530784 MYBPC1Q00872 1141 aa5.4□□□□□ -1.54
CSDE1-213ENST00000530784 RBBP4Q09028 425 aa5.4□□□□□ -1.54
CSDE1-213ENST00000530784 ALKBH6Q3KRA9 238 aa5.4□□□□□ -1.54
CSDE1-213ENST00000530784 REEP3Q6NUK4 255 aa5.4□□□□□ -1.54
CSDE1-213ENST00000530784 TRAT1Q6PIZ9 186 aa5.4□□□□□ -1.54
CSDE1-213ENST00000530784 PIWIL3Q7Z3Z3 882 aaKnown RBP5.4□□□□□ -1.54
CSDE1-213ENST00000530784 ZNF584Q8IVC4 421 aa5.4□□□□□ -1.54
CSDE1-213ENST00000530784 SKA3Q8IX90 412 aa5.4□□□□□ -1.54
CSDE1-213ENST00000530784 ABHD12Q8N2K0 398 aa5.4□□□□□ -1.54
CSDE1-213ENST00000530784 SLC22A24Q8N4F4 322 aa5.4□□□□□ -1.54
CSDE1-213ENST00000530784 C3orf56Q8N813 242 aa5.4□□□□□ -1.54
CSDE1-213ENST00000530784 TCEANCQ8N8B7 351 aa5.4□□□□□ -1.54
CSDE1-213ENST00000530784 OR5J2Q8NH18 312 aa5.4□□□□□ -1.54
CSDE1-213ENST00000530784 RAB39BQ96DA2 213 aa5.4□□□□□ -1.54
CSDE1-213ENST00000530784 ZNF607Q96SK3 696 aa5.4□□□□□ -1.54
CSDE1-213ENST00000530784 TMEM43Q9BTV4 400 aa5.4□□□□□ -1.54
CSDE1-213ENST00000530784 RSPO3Q9BXY4 272 aaPredicted RBP5.4□□□□□ -1.54
CSDE1-213ENST00000530784 ZNF665Q9H7R5 613 aa5.4□□□□□ -1.54
CSDE1-213ENST00000530784 GNB4Q9HAV0 340 aa5.4□□□□□ -1.54
CSDE1-213ENST00000530784 SLC25A37Q9NYZ2 338 aa5.4□□□□□ -1.54
CSDE1-213ENST00000530784 A0A0G2JMP0 313 aa5.39□□□□□ -1.55
CSDE1-213ENST00000530784 A0A0X1KG70 313 aa5.39□□□□□ -1.55
CSDE1-213ENST00000530784 CLDN25C9JDP6 229 aa5.39□□□□□ -1.55
CSDE1-213ENST00000530784 C11orf98E9PRG8 122 aa5.39□□□□□ -1.55
CSDE1-213ENST00000530784 K7EQD1 137 aa5.39□□□□□ -1.55
CSDE1-213ENST00000530784 PLPP3O14495 311 aa5.39□□□□□ -1.55
CSDE1-213ENST00000530784 SURF4O15260 269 aa5.39□□□□□ -1.55
CSDE1-213ENST00000530784 POLR3GO15318 223 aaPredicted RBP5.39□□□□□ -1.55
CSDE1-213ENST00000530784 MPZL1O95297 269 aa5.39□□□□□ -1.55
CSDE1-213ENST00000530784 OR8G3PP0DMU2 310 aa5.39□□□□□ -1.55
CSDE1-213ENST00000530784 KLF3P57682 345 aaPredicted RBP5.39□□□□□ -1.55
CSDE1-213ENST00000530784 CCL8P80075 99 aa5.39□□□□□ -1.55
CSDE1-213ENST00000530784 SCN1BQ07699 218 aa5.39□□□□□ -1.55
CSDE1-213ENST00000530784 CD300CQ08708 224 aa5.39□□□□□ -1.55
CSDE1-213ENST00000530784 SCARB2Q14108 478 aa5.39□□□□□ -1.55
CSDE1-213ENST00000530784 OR1Q1Q15612 314 aa5.39□□□□□ -1.55
CSDE1-213ENST00000530784 SLC36A2Q495M3 483 aa5.39□□□□□ -1.55
CSDE1-213ENST00000530784 AVPI1Q5T686 147 aa5.39□□□□□ -1.55
CSDE1-213ENST00000530784 ACSM5Q6NUN0 579 aa5.39□□□□□ -1.55
CSDE1-213ENST00000530784 WDR88Q6ZMY6 472 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms