RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, human

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-223	ENST00000529986	OR4D9	Q8NGE8	314 aa		6.85	□□□□□ -1.31
CTNND1-223	ENST00000529986	EXTL1	Q92935	676 aa		6.85	□□□□□ -1.31
CTNND1-223	ENST00000529986	PDF	Q9HBH1	243 aa		6.85	□□□□□ -1.31
CTNND1-223	ENST00000529986	MARCH5	Q9NX47	278 aa		6.85	□□□□□ -1.31
CTNND1-223	ENST00000529986	GDE1	Q9NZC3	331 aa		6.85	□□□□□ -1.31
CTNND1-223	ENST00000529986	HCFC2	Q9Y5Z7	792 aa		6.85	□□□□□ -1.31
CTNND1-223	ENST00000529986	SSC5D	A1L4H1	1573 aa		6.85	□□□□□ -1.31
CTNND1-223	ENST00000529986	CDK5RAP2	Q96SN8	1893 aa		6.85	□□□□□ -1.31
CTNND1-223	ENST00000529986	LINC00862	A6NCI5	91 aa		6.85	□□□□□ -1.31
CTNND1-223	ENST00000529986	RBFOX3	A6NFN3	312 aa		6.85	□□□□□ -1.31
CTNND1-223	ENST00000529986	PLPP2	O43688	288 aa		6.85	□□□□□ -1.31
CTNND1-223	ENST00000529986	WNT11	O96014	354 aa		6.85	□□□□□ -1.31
CTNND1-223	ENST00000529986	IGHE	P01854	428 aa		6.85	□□□□□ -1.31
CTNND1-223	ENST00000529986	TNFRSF4	P43489	277 aa		6.85	□□□□□ -1.31
CTNND1-223	ENST00000529986	SULT1A1	P50225	295 aa		6.85	□□□□□ -1.31
CTNND1-223	ENST00000529986	TCL1A	P56279	114 aa		6.85	□□□□□ -1.31
CTNND1-223	ENST00000529986	HSD17B7	P56937	341 aa		6.85	□□□□□ -1.31
CTNND1-223	ENST00000529986	ABI3BP	Q7Z7G0	1075 aa		6.85	□□□□□ -1.31
CTNND1-223	ENST00000529986	NHLRC2	Q8NBF2	726 aa		6.85	□□□□□ -1.31
CTNND1-223	ENST00000529986	ROBO4	Q8WZ75	1007 aa		6.85	□□□□□ -1.31
CTNND1-223	ENST00000529986	C8orf44	Q96CB5	159 aa		6.85	□□□□□ -1.31
CTNND1-223	ENST00000529986	KTI12	Q96EK9	354 aa	Predicted RBP	6.85	□□□□□ -1.31
CTNND1-223	ENST00000529986	IL21	Q9HBE4	155 aa		6.85	□□□□□ -1.31
CTNND1-223	ENST00000529986	TIMM10B	Q9Y5J6	103 aa		6.85	□□□□□ -1.31
CTNND1-223	ENST00000529986	TMEM265	A0A087WTH1	108 aa		6.84	□□□□□ -1.31
CTNND1-223	ENST00000529986	ANKRD20A5P	A0PJZ0	165 aa		6.84	□□□□□ -1.31
CTNND1-223	ENST00000529986	TNFRSF10C	O14798	259 aa		6.84	□□□□□ -1.31
CTNND1-223	ENST00000529986	RAB29	O14966	203 aa		6.84	□□□□□ -1.31
CTNND1-223	ENST00000529986	ALOX12B	O75342	701 aa		6.84	□□□□□ -1.31
CTNND1-223	ENST00000529986	ABLIM3	O94929	683 aa		6.84	□□□□□ -1.31
CTNND1-223	ENST00000529986	OPN1MW	P04001	364 aa		6.84	□□□□□ -1.31
CTNND1-223	ENST00000529986	CSN3	P07498	182 aa		6.84	□□□□□ -1.31
CTNND1-223	ENST00000529986	PRR35	P0CG20	571 aa		6.84	□□□□□ -1.31
CTNND1-223	ENST00000529986	OPN1MW2	P0DN77	364 aa		6.84	□□□□□ -1.31
CTNND1-223	ENST00000529986	OPN1MW3	P0DN78	364 aa		6.84	□□□□□ -1.31
CTNND1-223	ENST00000529986	ZBTB25	P24278	435 aa		6.84	□□□□□ -1.31
CTNND1-223	ENST00000529986	DLK1	P80370	383 aa		6.84	□□□□□ -1.31
CTNND1-223	ENST00000529986	SHB	Q15464	509 aa		6.84	□□□□□ -1.31
CTNND1-223	ENST00000529986	PRSS54	Q6PEW0	395 aa		6.84	□□□□□ -1.31
CTNND1-223	ENST00000529986	MRGPRE	Q86SM8	312 aa		6.84	□□□□□ -1.31
CTNND1-223	ENST00000529986	ZNF573	Q86YE8	665 aa		6.84	□□□□□ -1.31
CTNND1-223	ENST00000529986	ARHGEF39	Q8N4T4	335 aa		6.84	□□□□□ -1.31
CTNND1-223	ENST00000529986	FBXL6	Q8N531	539 aa		6.84	□□□□□ -1.31
CTNND1-223	ENST00000529986	CCL4L1	Q8NHW4	92 aa		6.84	□□□□□ -1.31
CTNND1-223	ENST00000529986	NKX6-3	A6NJ46	265 aa		6.84	□□□□□ -1.31
CTNND1-223	ENST00000529986	SHISA8	B8ZZ34	492 aa		6.84	□□□□□ -1.31
CTNND1-223	ENST00000529986	GATC	O43716	136 aa	Known RBP	6.84	□□□□□ -1.31
CTNND1-223	ENST00000529986	DUS4L	O95620	317 aa	Known RBP	6.84	□□□□□ -1.31
CTNND1-223	ENST00000529986	FAM109B	Q6ICB4	259 aa	Predicted RBP	6.84	□□□□□ -1.31
CTNND1-223	ENST00000529986	TMEM65	Q6PI78	240 aa		6.84	□□□□□ -1.31
CTNND1-223	ENST00000529986	ETV3L	Q6ZN32	361 aa		6.84	□□□□□ -1.31
CTNND1-223	ENST00000529986	FBXL14	Q8N1E6	418 aa		6.84	□□□□□ -1.31
CTNND1-223	ENST00000529986	CISD2	Q8N5K1	135 aa	Known RBP	6.84	□□□□□ -1.31
CTNND1-223	ENST00000529986	OR2M7	Q8NG81	312 aa		6.84	□□□□□ -1.31
CTNND1-223	ENST00000529986	ZG16B	Q96DA0	208 aa		6.84	□□□□□ -1.31
CTNND1-223	ENST00000529986	FAAP24	Q9BTP7	215 aa		6.84	□□□□□ -1.31
CTNND1-223	ENST00000529986	LAT2	Q9GZY6	243 aa		6.84	□□□□□ -1.31
CTNND1-223	ENST00000529986	ZMIZ1	Q9ULJ6	1067 aa		6.84	□□□□□ -1.31
CTNND1-223	ENST00000529986	FUT9	Q9Y231	359 aa		6.84	□□□□□ -1.31
CTNND1-223	ENST00000529986	B4GALT1	P15291	398 aa		6.84	□□□□□ -1.31
CTNND1-223	ENST00000529986	RPL34	P49207	117 aa	Known RBP	6.84	□□□□□ -1.31
CTNND1-223	ENST00000529986	RAB7A	P51149	207 aa		6.84	□□□□□ -1.31
CTNND1-223	ENST00000529986	RAG2	P55895	527 aa		6.84	□□□□□ -1.31
CTNND1-223	ENST00000529986	INSM1	Q01101	510 aa	Predicted RBP	6.84	□□□□□ -1.31
CTNND1-223	ENST00000529986	TMEM52B	Q4KMG9	183 aa		6.84	□□□□□ -1.31
CTNND1-223	ENST00000529986	LBH	Q53QV2	105 aa	Predicted RBP	6.84	□□□□□ -1.31
CTNND1-223	ENST00000529986	C6orf201	Q7Z4U5	140 aa		6.84	□□□□□ -1.31
CTNND1-223	ENST00000529986	TGIF2LX	Q8IUE1	241 aa		6.84	□□□□□ -1.31
CTNND1-223	ENST00000529986	CA13	Q8N1Q1	262 aa		6.84	□□□□□ -1.31
CTNND1-223	ENST00000529986	OTOS	Q8NHW6	89 aa		6.84	□□□□□ -1.31
CTNND1-223	ENST00000529986	EDA	Q92838	391 aa		6.84	□□□□□ -1.31
CTNND1-223	ENST00000529986	CIB3	Q96Q77	187 aa	Predicted RBP	6.84	□□□□□ -1.31
CTNND1-223	ENST00000529986	HDAC8	Q9BY41	377 aa		6.84	□□□□□ -1.31
CTNND1-223	ENST00000529986	COMMD5	Q9GZQ3	224 aa		6.84	□□□□□ -1.31
CTNND1-223	ENST00000529986	GSX1	Q9H4S2	264 aa	Predicted RBP	6.84	□□□□□ -1.31
CTNND1-223	ENST00000529986	LINC01553	A4QN01	128 aa		6.84	□□□□□ -1.31
CTNND1-223	ENST00000529986	OR5K3	A6NET4	321 aa		6.84	□□□□□ -1.31
CTNND1-223	ENST00000529986	FBLL1	A6NHQ2	334 aa	Known RBP	6.84	□□□□□ -1.31
CTNND1-223	ENST00000529986	TOX3	O15405	576 aa	Predicted RBP	6.84	□□□□□ -1.31
CTNND1-223	ENST00000529986	ZNF207	O43670	478 aa	Known RBP	6.84	□□□□□ -1.31
CTNND1-223	ENST00000529986	LANCL1	O43813	399 aa		6.84	□□□□□ -1.31
CTNND1-223	ENST00000529986	OR5AC1	P0C628	307 aa		6.84	□□□□□ -1.31
CTNND1-223	ENST00000529986	WNT3	P56703	355 aa		6.84	□□□□□ -1.31
CTNND1-223	ENST00000529986	TCTA	P57738	103 aa		6.84	□□□□□ -1.31
CTNND1-223	ENST00000529986	YPEL5	P62699	121 aa		6.84	□□□□□ -1.31
CTNND1-223	ENST00000529986	PPIA	P62937	165 aa	Known RBP	6.84	□□□□□ -1.31
CTNND1-223	ENST00000529986	CLN3	Q13286	438 aa		6.84	□□□□□ -1.31
CTNND1-223	ENST00000529986	PNLIPRP3	Q17RR3	467 aa		6.84	□□□□□ -1.31
CTNND1-223	ENST00000529986	STUM	Q69YW2	141 aa		6.84	□□□□□ -1.31
CTNND1-223	ENST00000529986	VASH2	Q86V25	355 aa		6.84	□□□□□ -1.31
CTNND1-223	ENST00000529986	ARL6IP6	Q8N6S5	226 aa		6.84	□□□□□ -1.31
CTNND1-223	ENST00000529986	OR10V1	Q8NGI7	309 aa		6.84	□□□□□ -1.31
CTNND1-223	ENST00000529986	OR10X1	Q8NGY0	326 aa		6.84	□□□□□ -1.31
CTNND1-223	ENST00000529986	CHAC2	Q8WUX2	184 aa		6.84	□□□□□ -1.31
CTNND1-223	ENST00000529986	WNT2B	Q93097	391 aa		6.84	□□□□□ -1.31
CTNND1-223	ENST00000529986	FKBP11	Q9NYL4	201 aa		6.84	□□□□□ -1.31
CTNND1-223	ENST00000529986	ELOA3C	A0A087WX78	387 aa	Predicted RBP	6.83	□□□□□ -1.32
CTNND1-223	ENST00000529986	NTN1	O95631	604 aa		6.83	□□□□□ -1.32
CTNND1-223	ENST00000529986	PTGFR	P43088	359 aa		6.83	□□□□□ -1.32
CTNND1-223	ENST00000529986	CDC34	P49427	236 aa	Predicted RBP	6.83	□□□□□ -1.32

Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms