RNA–Protein interactions for RNA: ENST00000529566.1

TSPAN4-218, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 706 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-218ENST00000529566 TRIM36Q9NQ86 728 aa13.43□□□□□ -0.26
TSPAN4-218ENST00000529566 DIMT1Q9UNQ2 313 aaKnown RBP13.43□□□□□ -0.26
TSPAN4-218ENST00000529566 DOCK11Q5JSL3 2073 aa13.43□□□□□ -0.26
TSPAN4-218ENST00000529566 ANKRD61A6NGH8 418 aa13.42□□□□□ -0.26
TSPAN4-218ENST00000529566 NDUFA2O43678 99 aa13.42□□□□□ -0.26
TSPAN4-218ENST00000529566 GYPAP02724 150 aa13.42□□□□□ -0.26
TSPAN4-218ENST00000529566 MUC1P15941 1255 aaPredicted RBP13.42□□□□□ -0.26
TSPAN4-218ENST00000529566 ZNF12P17014 697 aa13.42□□□□□ -0.26
TSPAN4-218ENST00000529566 AMY2BP19961 511 aa13.42□□□□□ -0.26
TSPAN4-218ENST00000529566 PITPNBP48739 271 aa13.42□□□□□ -0.26
TSPAN4-218ENST00000529566 AQP4P55087 323 aa13.42□□□□□ -0.26
TSPAN4-218ENST00000529566 DCAF12L2Q5VW00 463 aa13.42□□□□□ -0.26
TSPAN4-218ENST00000529566 WDR25Q64LD2 544 aaPredicted RBP13.42□□□□□ -0.26
TSPAN4-218ENST00000529566 NLRC3Q7RTR2 1065 aa13.42□□□□□ -0.26
TSPAN4-218ENST00000529566 OR8B3Q8NGG8 313 aa13.42□□□□□ -0.26
TSPAN4-218ENST00000529566 OR10AC1Q8NH08 325 aa13.42□□□□□ -0.26
TSPAN4-218ENST00000529566 C12orf43Q96C57 262 aaKnown RBP13.42□□□□□ -0.26
TSPAN4-218ENST00000529566 C10orf35Q96D05 121 aa13.42□□□□□ -0.26
TSPAN4-218ENST00000529566 ADAT3Q96EY9 351 aaPredicted RBP13.42□□□□□ -0.26
TSPAN4-218ENST00000529566 OR8B2Q96RD0 313 aa13.42□□□□□ -0.26
TSPAN4-218ENST00000529566 CHST5Q9GZS9 411 aa13.42□□□□□ -0.26
TSPAN4-218ENST00000529566 PLCXD1Q9NUJ7 323 aa13.42□□□□□ -0.26
TSPAN4-218ENST00000529566 KAAG1Q9UBP8 84 aa13.42□□□□□ -0.26
TSPAN4-218ENST00000529566 CLEC2DQ9UHP7 191 aa13.42□□□□□ -0.26
TSPAN4-218ENST00000529566 INSIG2Q9Y5U4 225 aa13.42□□□□□ -0.26
TSPAN4-218ENST00000529566 IRGMA1A4Y4 181 aa13.41□□□□□ -0.26
TSPAN4-218ENST00000529566 AKR7A2O43488 359 aa13.41□□□□□ -0.26
TSPAN4-218ENST00000529566 ZFPL1O95159 310 aa13.41□□□□□ -0.26
TSPAN4-218ENST00000529566 TGM4P49221 684 aa13.41□□□□□ -0.26
TSPAN4-218ENST00000529566 GNB2P62879 340 aa13.41□□□□□ -0.26
TSPAN4-218ENST00000529566 PAX8Q06710 450 aa13.41□□□□□ -0.26
TSPAN4-218ENST00000529566 MRPL28Q13084 256 aaKnown RBP13.41□□□□□ -0.26
TSPAN4-218ENST00000529566 MICBQ29980 383 aa13.41□□□□□ -0.26
TSPAN4-218ENST00000529566 ATPAF1Q5TC12 328 aaPredicted RBP13.41□□□□□ -0.26
TSPAN4-218ENST00000529566 HAGHLQ6PII5 290 aaPredicted RBP13.41□□□□□ -0.26
TSPAN4-218ENST00000529566 ZNF485Q8NCK3 441 aa13.41□□□□□ -0.26
TSPAN4-218ENST00000529566 OR51A4Q8NGJ6 313 aa13.41□□□□□ -0.26
TSPAN4-218ENST00000529566 RASSF4Q9H2L5 321 aa13.41□□□□□ -0.26
TSPAN4-218ENST00000529566 SMURF1Q9HCE7 757 aa13.41□□□□□ -0.26
TSPAN4-218ENST00000529566 PSORS1C1Q9UIG5 152 aa13.41□□□□□ -0.26
TSPAN4-218ENST00000529566 CAB39Q9Y376 341 aaPredicted RBP13.41□□□□□ -0.26
TSPAN4-218ENST00000529566 IGKV1-27A0A075B6S5 117 aa13.4□□□□□ -0.26
TSPAN4-218ENST00000529566 LOC105371242A0A075B767 164 aa13.4□□□□□ -0.26
TSPAN4-218ENST00000529566 A0A1B0GW55 424 aa13.4□□□□□ -0.26
TSPAN4-218ENST00000529566 ADAM20O43506 726 aa13.4□□□□□ -0.26
TSPAN4-218ENST00000529566 XPNPEP2O43895 674 aa13.4□□□□□ -0.26
TSPAN4-218ENST00000529566 FSHBP01225 129 aa13.4□□□□□ -0.26
TSPAN4-218ENST00000529566 DUX4L2P0CJ85 424 aa13.4□□□□□ -0.26
TSPAN4-218ENST00000529566 DUX4L3P0CJ86 424 aa13.4□□□□□ -0.26
TSPAN4-218ENST00000529566 DUX4L4P0CJ87 422 aa13.4□□□□□ -0.26
TSPAN4-218ENST00000529566 DUX4L5P0CJ88 424 aa13.4□□□□□ -0.26
TSPAN4-218ENST00000529566 DUX4L6P0CJ89 424 aa13.4□□□□□ -0.26
TSPAN4-218ENST00000529566 DUX4L7P0CJ90 424 aa13.4□□□□□ -0.26
TSPAN4-218ENST00000529566 PIPP12273 146 aaPredicted RBP13.4□□□□□ -0.26
TSPAN4-218ENST00000529566 MPZP25189 248 aa13.4□□□□□ -0.26
TSPAN4-218ENST00000529566 GTF2A1P52655 376 aaPredicted RBP13.4□□□□□ -0.26
TSPAN4-218ENST00000529566 ST3GAL4Q11206 333 aa13.4□□□□□ -0.26
TSPAN4-218ENST00000529566 RIPK1Q13546 671 aa13.4□□□□□ -0.26
TSPAN4-218ENST00000529566 OR2G6Q5TZ20 316 aa13.4□□□□□ -0.26
TSPAN4-218ENST00000529566 STUMQ69YW2 141 aa13.4□□□□□ -0.26
TSPAN4-218ENST00000529566 XAF1Q6GPH4 301 aa13.4□□□□□ -0.26
TSPAN4-218ENST00000529566 DUX4L9Q6RFH8 374 aaPredicted RBP13.4□□□□□ -0.26
TSPAN4-218ENST00000529566 ZNF573Q86YE8 665 aa13.4□□□□□ -0.26
TSPAN4-218ENST00000529566 RPS4Y2Q8TD47 263 aa13.4□□□□□ -0.26
TSPAN4-218ENST00000529566 RAB40AQ8WXH6 277 aa13.4□□□□□ -0.26
TSPAN4-218ENST00000529566 FGGYQ96C11 551 aa13.4□□□□□ -0.26
TSPAN4-218ENST00000529566 TMEM80Q96HE8 168 aa13.4□□□□□ -0.26
TSPAN4-218ENST00000529566 C7orf69Q9H7B7 122 aa13.4□□□□□ -0.26
TSPAN4-218ENST00000529566 PLEKHA1Q9HB21 404 aa13.4□□□□□ -0.26
TSPAN4-218ENST00000529566 FKBP14Q9NWM8 211 aa13.4□□□□□ -0.26
TSPAN4-218ENST00000529566 ERVK-18Q9QC07 812 aa13.4□□□□□ -0.26
TSPAN4-218ENST00000529566 DUX4Q9UBX2 424 aa13.4□□□□□ -0.26
TSPAN4-218ENST00000529566 CLN8Q9UBY8 286 aa13.4□□□□□ -0.26
TSPAN4-218ENST00000529566 OR5V1Q9UGF6 321 aa13.4□□□□□ -0.26
TSPAN4-218ENST00000529566 HHLA2Q9UM44 414 aa13.4□□□□□ -0.26
TSPAN4-218ENST00000529566 FBN1P35555 2871 aaKnown RBP13.4□□□□□ -0.26
TSPAN4-218ENST00000529566 ATRQ13535 2644 aa13.4□□□□□ -0.26
TSPAN4-218ENST00000529566 IGHV2-70DA0A0C4DH43 119 aa13.39□□□□□ -0.27
TSPAN4-218ENST00000529566 IGKV1-9A0A0C4DH69 117 aa13.39□□□□□ -0.27
TSPAN4-218ENST00000529566 KIR2DS1A0A191URI9 304 aa13.39□□□□□ -0.27
TSPAN4-218ENST00000529566 C22orf46C9J442 243 aa13.39□□□□□ -0.27
TSPAN4-218ENST00000529566 SYNGR1O43759 233 aa13.39□□□□□ -0.27
TSPAN4-218ENST00000529566 NOS1APO75052 506 aaPredicted RBP13.39□□□□□ -0.27
TSPAN4-218ENST00000529566 HAAOP46952 286 aa13.39□□□□□ -0.27
TSPAN4-218ENST00000529566 NPY4RP50391 375 aa13.39□□□□□ -0.27
TSPAN4-218ENST00000529566 GBX2P52951 348 aaPredicted RBP13.39□□□□□ -0.27
TSPAN4-218ENST00000529566 GMFBP60983 142 aa13.39□□□□□ -0.27
TSPAN4-218ENST00000529566 UTS2BQ765I0 119 aa13.39□□□□□ -0.27
TSPAN4-218ENST00000529566 C1QL2Q7Z5L3 287 aa13.39□□□□□ -0.27
TSPAN4-218ENST00000529566 ANGPTL5Q86XS5 388 aa13.39□□□□□ -0.27
TSPAN4-218ENST00000529566 CALHM1Q8IU99 346 aa13.39□□□□□ -0.27
TSPAN4-218ENST00000529566 OR5T2Q8NGG2 359 aa13.39□□□□□ -0.27
TSPAN4-218ENST00000529566 ANGPTL6Q8NI99 470 aa13.39□□□□□ -0.27
TSPAN4-218ENST00000529566 ZNF671Q8TAW3 534 aa13.39□□□□□ -0.27
TSPAN4-218ENST00000529566 PP6455Q8WZ26 134 aa13.39□□□□□ -0.27
TSPAN4-218ENST00000529566 CCL13Q99616 98 aa13.39□□□□□ -0.27
TSPAN4-218ENST00000529566 PDCD1LG2Q9BQ51 273 aa13.39□□□□□ -0.27
TSPAN4-218ENST00000529566 CNOT2Q9NZN8 540 aaKnown RBP13.39□□□□□ -0.27
TSPAN4-218ENST00000529566 EXOSC1Q9Y3B2 195 aaKnown RBP13.39□□□□□ -0.27
TSPAN4-218ENST00000529566 SIRT4Q9Y6E7 314 aaPredicted RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms