RNA–Protein interactions for RNA: ENST00000528672.1

CD44-229, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-229ENST00000528672 BCHEP06276 602 aa2.57□□□□□ -2
CD44-229ENST00000528672 C8orf88P0DMB2 117 aa2.57□□□□□ -2
CD44-229ENST00000528672 HIST1H1CP16403 213 aaKnown RBP2.57□□□□□ -2
CD44-229ENST00000528672 ABOP16442 354 aa2.57□□□□□ -2
CD44-229ENST00000528672 IGHV1-2P23083 117 aa2.57□□□□□ -2
CD44-229ENST00000528672 PSMA1P25786 263 aaKnown RBP2.57□□□□□ -2
CD44-229ENST00000528672 IL12AP29459 219 aa2.57□□□□□ -2
CD44-229ENST00000528672 CASP1P29466 404 aa2.57□□□□□ -2
CD44-229ENST00000528672 GCLMP48507 274 aa2.57□□□□□ -2
CD44-229ENST00000528672 RPL34P49207 117 aaKnown RBP2.57□□□□□ -2
CD44-229ENST00000528672 CAV2P51636 162 aa2.57□□□□□ -2
CD44-229ENST00000528672 CDKN2DP55273 166 aa2.57□□□□□ -2
CD44-229ENST00000528672 RPS14P62263 151 aaKnown RBP2.57□□□□□ -2
CD44-229ENST00000528672 SELENOTP62341 195 aa2.57□□□□□ -2
CD44-229ENST00000528672 PAX8Q06710 450 aa2.57□□□□□ -2
CD44-229ENST00000528672 ZNF616Q08AN1 781 aa2.57□□□□□ -2
CD44-229ENST00000528672 BIKQ13323 160 aa2.57□□□□□ -2
CD44-229ENST00000528672 OR5I1Q13606 314 aa2.57□□□□□ -2
CD44-229ENST00000528672 OR8G1Q15617 311 aa2.57□□□□□ -2
CD44-229ENST00000528672 ISXQ2M1V0 245 aa2.57□□□□□ -2
CD44-229ENST00000528672 CARD16Q5EG05 197 aa2.57□□□□□ -2
CD44-229ENST00000528672 PABPC1L2AQ5JQF8 200 aa2.57□□□□□ -2
CD44-229ENST00000528672 C22orf42Q6IC83 251 aa2.57□□□□□ -2
CD44-229ENST00000528672 UFSP1Q6NVU6 142 aa2.57□□□□□ -2
CD44-229ENST00000528672 HAGHLQ6PII5 290 aaPredicted RBP2.57□□□□□ -2
CD44-229ENST00000528672 CD200R1LQ6Q8B3 271 aa2.57□□□□□ -2
CD44-229ENST00000528672 CASP12Q6UXS9 341 aa2.57□□□□□ -2
CD44-229ENST00000528672 Q6ZSR3 168 aa2.57□□□□□ -2
CD44-229ENST00000528672 ZNF767PQ75MW2 155 aa2.57□□□□□ -2
CD44-229ENST00000528672 SSX7Q7RTT5 188 aa2.57□□□□□ -2
CD44-229ENST00000528672 SLC36A1Q7Z2H8 476 aa2.57□□□□□ -2
CD44-229ENST00000528672 MRPL52Q86TS9 123 aaKnown RBP2.57□□□□□ -2
CD44-229ENST00000528672 LRRC28Q86X40 367 aaPredicted RBP2.57□□□□□ -2
CD44-229ENST00000528672 MARCH9Q86YJ5 346 aa2.57□□□□□ -2
CD44-229ENST00000528672 APOBEC3FQ8IUX4 373 aaKnown RBP2.57□□□□□ -2
CD44-229ENST00000528672 EIF4E3Q8N5X7 224 aaKnown RBP2.57□□□□□ -2
CD44-229ENST00000528672 METTL13Q8N6R0 699 aa2.57□□□□□ -2
CD44-229ENST00000528672 TPRX1Q8N7U7 411 aa2.57□□□□□ -2
CD44-229ENST00000528672 ATP6V1C2Q8NEY4 427 aa2.57□□□□□ -2
CD44-229ENST00000528672 NOXO1Q8NFA2 376 aa2.57□□□□□ -2
CD44-229ENST00000528672 OR2Z1Q8NG97 314 aa2.57□□□□□ -2
CD44-229ENST00000528672 OR56A4Q8NGH8 313 aa2.57□□□□□ -2
CD44-229ENST00000528672 OR56B4Q8NH76 319 aa2.57□□□□□ -2
CD44-229ENST00000528672 OR2AE1Q8NHA4 323 aa2.57□□□□□ -2
CD44-229ENST00000528672 FAM45AQ8TCE6 357 aa2.57□□□□□ -2
CD44-229ENST00000528672 RNF138Q8WVD3 245 aa2.57□□□□□ -2
CD44-229ENST00000528672 C1orf54Q8WWF1 131 aa2.57□□□□□ -2
CD44-229ENST00000528672 BAALCQ8WXS3 180 aa2.57□□□□□ -2
CD44-229ENST00000528672 ACOT12Q8WYK0 555 aa2.57□□□□□ -2
CD44-229ENST00000528672 RERGQ96A58 199 aaPredicted RBP2.57□□□□□ -2
CD44-229ENST00000528672 TBX15Q96SF7 602 aa2.57□□□□□ -2
CD44-229ENST00000528672 ARHGDIGQ99819 225 aa2.57□□□□□ -2
CD44-229ENST00000528672 GFRA4Q9GZZ7 299 aa2.57□□□□□ -2
CD44-229ENST00000528672 DHX35Q9H5Z1 703 aaKnown RBP2.57□□□□□ -2
CD44-229ENST00000528672 GPATCH2LQ9NWQ4 482 aa2.57□□□□□ -2
CD44-229ENST00000528672 RASL12Q9NYN1 266 aa2.57□□□□□ -2
CD44-229ENST00000528672 DHRS4-AS1Q9P1J3 65 aa2.57□□□□□ -2
CD44-229ENST00000528672 DPM3Q9P2X0 92 aa2.57□□□□□ -2
CD44-229ENST00000528672 ZNF223Q9UK11 482 aaPredicted RBP2.57□□□□□ -2
CD44-229ENST00000528672 NEU3Q9UQ49 428 aa2.57□□□□□ -2
CD44-229ENST00000528672 ANGPT4Q9Y264 503 aa2.57□□□□□ -2
CD44-229ENST00000528672 UFC1Q9Y3C8 167 aa2.57□□□□□ -2
CD44-229ENST00000528672 RPL36Q9Y3U8 105 aaKnown RBP2.57□□□□□ -2
CD44-229ENST00000528672 ABCB11O95342 1321 aa2.57□□□□□ -2
CD44-229ENST00000528672 ADGRA3Q8IWK6 1321 aa2.57□□□□□ -2
CD44-229ENST00000528672 BCL9O00512 1426 aa2.57□□□□□ -2
CD44-229ENST00000528672 SMG6Q86US8 1419 aaKnown RBP2.57□□□□□ -2
CD44-229ENST00000528672 YEATS2Q9ULM3 1422 aa2.57□□□□□ -2
CD44-229ENST00000528672 ABCA10Q8WWZ4 1543 aa2.57□□□□□ -2
CD44-229ENST00000528672 THOC2Q8NI27 1593 aaKnown RBP2.57□□□□□ -2
CD44-229ENST00000528672 TRAV8-7A0A075B6U6 113 aa2.56□□□□□ -2
CD44-229ENST00000528672 TRBV9A0A0B4J1U6 114 aa2.56□□□□□ -2
CD44-229ENST00000528672 SMIM28A0A1B0GU29 152 aa2.56□□□□□ -2
CD44-229ENST00000528672 NDUFAF8A1L188 74 aa2.56□□□□□ -2
CD44-229ENST00000528672 TMEM150BA6NC51 233 aa2.56□□□□□ -2
CD44-229ENST00000528672 PRORSD1PA6NEY8 169 aa2.56□□□□□ -2
CD44-229ENST00000528672 OR6C6A6NF89 314 aa2.56□□□□□ -2
CD44-229ENST00000528672 CCDC160A6NGH7 325 aa2.56□□□□□ -2
CD44-229ENST00000528672 SLC22A20A6NK97 555 aa2.56□□□□□ -2
CD44-229ENST00000528672 SIGLEC16A6NMB1 481 aa2.56□□□□□ -2
CD44-229ENST00000528672 DHRS7CA6NNS2 312 aa2.56□□□□□ -2
CD44-229ENST00000528672 ZNF705EA8MWA4 302 aaPredicted RBP2.56□□□□□ -2
CD44-229ENST00000528672 SHISA9B4DS77 424 aa2.56□□□□□ -2
CD44-229ENST00000528672 C5orf58C9J3I9 102 aa2.56□□□□□ -2
CD44-229ENST00000528672 ZNF878C9JN71 531 aa2.56□□□□□ -2
CD44-229ENST00000528672 H7C2Y5 167 aa2.56□□□□□ -2
CD44-229ENST00000528672 H7C423 109 aa2.56□□□□□ -2
CD44-229ENST00000528672 K7ENP7 123 aa2.56□□□□□ -2
CD44-229ENST00000528672 DCTN6O00399 190 aa2.56□□□□□ -2
CD44-229ENST00000528672 TCF21O43680 179 aa2.56□□□□□ -2
CD44-229ENST00000528672 GALR3O60755 368 aaPredicted RBP2.56□□□□□ -2
CD44-229ENST00000528672 HSBP1O75506 76 aa2.56□□□□□ -2
CD44-229ENST00000528672 OR2B3O76000 313 aa2.56□□□□□ -2
CD44-229ENST00000528672 KBTBD11O94819 623 aa2.56□□□□□ -2
CD44-229ENST00000528672 VENTXO95231 258 aa2.56□□□□□ -2
CD44-229ENST00000528672 PDYNP01213 254 aa2.56□□□□□ -2
CD44-229ENST00000528672 HLA-HP01893 362 aa2.56□□□□□ -2
CD44-229ENST00000528672 MT-ND4P03905 459 aa2.56□□□□□ -2
CD44-229ENST00000528672 ARG1P05089 322 aa2.56□□□□□ -2
CD44-229ENST00000528672 C8GP07360 202 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms