RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 CLCF1Q9UBD9 225 aa12.8□□□□□ -0.36
ECHDC1-220ENST00000528402 HSPB11Q9Y547 144 aa12.8□□□□□ -0.36
ECHDC1-220ENST00000528402 KCNMB2Q9Y691 235 aa12.8□□□□□ -0.36
ECHDC1-220ENST00000528402 RTTNQ86VV8 2226 aa12.8□□□□□ -0.36
ECHDC1-220ENST00000528402 C5orf49A4QMS7 147 aa12.79□□□□□ -0.36
ECHDC1-220ENST00000528402 AHRRA9YTQ3 701 aa12.79□□□□□ -0.36
ECHDC1-220ENST00000528402 HRH1P35367 487 aa12.79□□□□□ -0.36
ECHDC1-220ENST00000528402 ECI1P42126 302 aa12.79□□□□□ -0.36
ECHDC1-220ENST00000528402 PDZK1IP1Q13113 114 aa12.79□□□□□ -0.36
ECHDC1-220ENST00000528402 MRPL49Q13405 166 aaKnown RBP12.79□□□□□ -0.36
ECHDC1-220ENST00000528402 C3AR1Q16581 482 aa12.79□□□□□ -0.36
ECHDC1-220ENST00000528402 ATPAF1Q5TC12 328 aaPredicted RBP12.79□□□□□ -0.36
ECHDC1-220ENST00000528402 PLCXD3Q63HM9 321 aa12.79□□□□□ -0.36
ECHDC1-220ENST00000528402 NSUN5P2Q63ZY6 315 aa12.79□□□□□ -0.36
ECHDC1-220ENST00000528402 OR2A2Q6IF42 318 aa12.79□□□□□ -0.36
ECHDC1-220ENST00000528402 C9orf62Q8N4C0 152 aa12.79□□□□□ -0.36
ECHDC1-220ENST00000528402 C12orf45Q8N5I9 185 aaPredicted RBP12.79□□□□□ -0.36
ECHDC1-220ENST00000528402 GVQW1Q8N7I0 195 aa12.79□□□□□ -0.36
ECHDC1-220ENST00000528402 OR4S1Q8NGB4 309 aa12.79□□□□□ -0.36
ECHDC1-220ENST00000528402 OR5D18Q8NGL1 313 aa12.79□□□□□ -0.36
ECHDC1-220ENST00000528402 OR13C8Q8NGS7 320 aa12.79□□□□□ -0.36
ECHDC1-220ENST00000528402 OR2T35Q8NGX2 323 aa12.79□□□□□ -0.36
ECHDC1-220ENST00000528402 TERB2Q8NHR7 220 aa12.79□□□□□ -0.36
ECHDC1-220ENST00000528402 WNT2BQ93097 391 aa12.79□□□□□ -0.36
ECHDC1-220ENST00000528402 BOD1Q96IK1 185 aa12.79□□□□□ -0.36
ECHDC1-220ENST00000528402 CHST6Q9GZX3 395 aa12.79□□□□□ -0.36
ECHDC1-220ENST00000528402 FAM86C1Q9NVL1 165 aa12.79□□□□□ -0.36
ECHDC1-220ENST00000528402 DLL3Q9NYJ7 618 aa12.79□□□□□ -0.36
ECHDC1-220ENST00000528402 MYO15AQ9UKN7 3530 aa12.79□□□□□ -0.36
ECHDC1-220ENST00000528402 FREM1Q5H8C1 2179 aa12.79□□□□□ -0.36
ECHDC1-220ENST00000528402 FAM90A10PA6NDY2 464 aa12.79□□□□□ -0.36
ECHDC1-220ENST00000528402 FAM90A18PA6NE21 464 aa12.79□□□□□ -0.36
ECHDC1-220ENST00000528402 FAM90A16PA6NEW6 464 aa12.79□□□□□ -0.36
ECHDC1-220ENST00000528402 FAM90A20PA6NIJ5 464 aa12.79□□□□□ -0.36
ECHDC1-220ENST00000528402 FAM90A8PA6NJQ4 464 aa12.79□□□□□ -0.36
ECHDC1-220ENST00000528402 FAM90A7PA6NKC0 464 aa12.79□□□□□ -0.36
ECHDC1-220ENST00000528402 CEACAM18A8MTB9 384 aa12.79□□□□□ -0.36
ECHDC1-220ENST00000528402 FAM90A22PA8MWA6 464 aa12.79□□□□□ -0.36
ECHDC1-220ENST00000528402 FAM90A12PA8MX19 464 aa12.79□□□□□ -0.36
ECHDC1-220ENST00000528402 FAM90A5PA8MXJ8 464 aa12.79□□□□□ -0.36
ECHDC1-220ENST00000528402 FAM90A23PA8MXZ1 464 aa12.79□□□□□ -0.36
ECHDC1-220ENST00000528402 PROB1E7EW31 1015 aa12.79□□□□□ -0.36
ECHDC1-220ENST00000528402 HTR3BO95264 441 aa12.79□□□□□ -0.36
ECHDC1-220ENST00000528402 FAM90A15PP0C7V4 464 aa12.79□□□□□ -0.36
ECHDC1-220ENST00000528402 FAM90A13PP0C7W8 464 aa12.79□□□□□ -0.36
ECHDC1-220ENST00000528402 FAM90A14PP0C7W9 464 aa12.79□□□□□ -0.36
ECHDC1-220ENST00000528402 FAM90A24PP0C7X0 464 aa12.79□□□□□ -0.36
ECHDC1-220ENST00000528402 WT1P19544 449 aaPredicted RBP12.79□□□□□ -0.36
ECHDC1-220ENST00000528402 OR3A3P47888 321 aa12.79□□□□□ -0.36
ECHDC1-220ENST00000528402 DHODHQ02127 395 aa12.79□□□□□ -0.36
ECHDC1-220ENST00000528402 GRK1Q15835 563 aa12.79□□□□□ -0.36
ECHDC1-220ENST00000528402 C9orf135Q5VTT2 229 aa12.79□□□□□ -0.36
ECHDC1-220ENST00000528402 LAMTOR1Q6IAA8 161 aa12.79□□□□□ -0.36
ECHDC1-220ENST00000528402 CD163Q86VB7 1156 aa12.79□□□□□ -0.36
ECHDC1-220ENST00000528402 MUC20Q8N307 709 aaPredicted RBP12.79□□□□□ -0.36
ECHDC1-220ENST00000528402 Q8NFD4 153 aa12.79□□□□□ -0.36
ECHDC1-220ENST00000528402 OR5H2Q8NGV7 314 aa12.79□□□□□ -0.36
ECHDC1-220ENST00000528402 MS4A3Q96HJ5 214 aa12.79□□□□□ -0.36
ECHDC1-220ENST00000528402 GPR137Q96N19 417 aa12.79□□□□□ -0.36
ECHDC1-220ENST00000528402 HIST1H2AAQ96QV6 131 aa12.79□□□□□ -0.36
ECHDC1-220ENST00000528402 LRFN3Q9BTN0 628 aa12.79□□□□□ -0.36
ECHDC1-220ENST00000528402 PLSCR2Q9NRY7 297 aa12.79□□□□□ -0.36
ECHDC1-220ENST00000528402 PLEKHJ1Q9NW61 149 aa12.79□□□□□ -0.36
ECHDC1-220ENST00000528402 PRSS50Q9UI38 385 aa12.79□□□□□ -0.36
ECHDC1-220ENST00000528402 VPS13AQ96RL7 3174 aa12.78□□□□□ -0.36
ECHDC1-220ENST00000528402 A0A1W2PP11 408 aa12.78□□□□□ -0.36
ECHDC1-220ENST00000528402 SMLR1H3BR10 107 aa12.78□□□□□ -0.36
ECHDC1-220ENST00000528402 IL18BPO95998 194 aa12.78□□□□□ -0.36
ECHDC1-220ENST00000528402 AMY2BP19961 511 aa12.78□□□□□ -0.36
ECHDC1-220ENST00000528402 DTYMKP23919 212 aa12.78□□□□□ -0.36
ECHDC1-220ENST00000528402 GMFBP60983 142 aa12.78□□□□□ -0.36
ECHDC1-220ENST00000528402 SRSF6Q13247 344 aaKnown RBP12.78□□□□□ -0.36
ECHDC1-220ENST00000528402 CEACAM21Q3KPI0 293 aa12.78□□□□□ -0.36
ECHDC1-220ENST00000528402 FAM214BQ7L5A3 538 aa12.78□□□□□ -0.36
ECHDC1-220ENST00000528402 TMEM200AQ86VY9 491 aa12.78□□□□□ -0.36
ECHDC1-220ENST00000528402 OSR2Q8N2R0 312 aa12.78□□□□□ -0.36
ECHDC1-220ENST00000528402 FBXW5Q969U6 566 aa12.78□□□□□ -0.36
ECHDC1-220ENST00000528402 C12orf49Q9H741 205 aa12.78□□□□□ -0.36
ECHDC1-220ENST00000528402 PLSCR3Q9NRY6 295 aa12.78□□□□□ -0.36
ECHDC1-220ENST00000528402 PIPOXQ9P0Z9 390 aa12.78□□□□□ -0.36
ECHDC1-220ENST00000528402 BOLA1Q9Y3E2 137 aa12.78□□□□□ -0.36
ECHDC1-220ENST00000528402 MPC1Q9Y5U8 109 aa12.78□□□□□ -0.36
ECHDC1-220ENST00000528402 SLC22A5O76082 557 aa12.77□□□□□ -0.37
ECHDC1-220ENST00000528402 IL2RAP01589 272 aa12.77□□□□□ -0.37
ECHDC1-220ENST00000528402 HLA-GP17693 338 aa12.77□□□□□ -0.37
ECHDC1-220ENST00000528402 CCNOP22674 350 aa12.77□□□□□ -0.37
ECHDC1-220ENST00000528402 S100A1P23297 94 aa12.77□□□□□ -0.37
ECHDC1-220ENST00000528402 FOXG1P55316 489 aaPredicted RBP12.77□□□□□ -0.37
ECHDC1-220ENST00000528402 ZNF169Q14929 603 aaPredicted RBP12.77□□□□□ -0.37
ECHDC1-220ENST00000528402 SURF2Q15527 256 aaPredicted RBP12.77□□□□□ -0.37
ECHDC1-220ENST00000528402 NKPD1Q17RQ9 610 aa12.77□□□□□ -0.37
ECHDC1-220ENST00000528402 TBC1D28Q2M2D7 210 aa12.77□□□□□ -0.37
ECHDC1-220ENST00000528402 OR52W1Q6IF63 320 aa12.77□□□□□ -0.37
ECHDC1-220ENST00000528402 LIN54Q6MZP7 749 aa12.77□□□□□ -0.37
ECHDC1-220ENST00000528402 INO80CQ6PI98 192 aaPredicted RBP12.77□□□□□ -0.37
ECHDC1-220ENST00000528402 TMED4Q7Z7H5 227 aa12.77□□□□□ -0.37
ECHDC1-220ENST00000528402 OR5AP2Q8NGF4 316 aa12.77□□□□□ -0.37
ECHDC1-220ENST00000528402 OR5A2Q8NGI9 324 aa12.77□□□□□ -0.37
ECHDC1-220ENST00000528402 OR10K1Q8NGX5 313 aa12.77□□□□□ -0.37
ECHDC1-220ENST00000528402 NOP16Q9Y3C1 178 aaKnown RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms