RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 KIR2DL5BA0A0G2JN68 375 aa4.34□□□□□ -1.71
PCF11-202ENST00000528336 KIR2DL5BA0A0G2JPC4 375 aa4.34□□□□□ -1.71
PCF11-202ENST00000528336 OR2AT4A6NND4 320 aa4.34□□□□□ -1.71
PCF11-202ENST00000528336 EFCAB7A8K855 629 aa4.34□□□□□ -1.71
PCF11-202ENST00000528336 J3QLI3 93 aa4.34□□□□□ -1.71
PCF11-202ENST00000528336 SAP18O00422 153 aaKnown RBP4.34□□□□□ -1.71
PCF11-202ENST00000528336 DYNC1I1O14576 645 aa4.34□□□□□ -1.71
PCF11-202ENST00000528336 CDC40O60508 579 aaKnown RBP eCLIP4.34□□□□□ -1.71
PCF11-202ENST00000528336 SNAPINO95295 136 aa4.34□□□□□ -1.71
PCF11-202ENST00000528336 LSM8O95777 96 aaKnown RBP4.34□□□□□ -1.71
PCF11-202ENST00000528336 CT45A6P0DMU7 189 aa4.34□□□□□ -1.71
PCF11-202ENST00000528336 CT45A5P0DMU8 189 aa4.34□□□□□ -1.71
PCF11-202ENST00000528336 CT45A7P0DMV0 189 aa4.34□□□□□ -1.71
PCF11-202ENST00000528336 ATF6P18850 670 aa4.34□□□□□ -1.71
PCF11-202ENST00000528336 KLK2P20151 261 aa4.34□□□□□ -1.71
PCF11-202ENST00000528336 ME2P23368 584 aa4.34□□□□□ -1.71
PCF11-202ENST00000528336 GNRHRP30968 328 aa4.34□□□□□ -1.71
PCF11-202ENST00000528336 TGFBR2P37173 567 aa4.34□□□□□ -1.71
PCF11-202ENST00000528336 IDH3GP51553 393 aaPredicted RBP4.34□□□□□ -1.71
PCF11-202ENST00000528336 CAV2P51636 162 aa4.34□□□□□ -1.71
PCF11-202ENST00000528336 MNAT1P51948 309 aa4.34□□□□□ -1.71
PCF11-202ENST00000528336 MFAP2P55001 183 aa4.34□□□□□ -1.71
PCF11-202ENST00000528336 AESQ08117 197 aa4.34□□□□□ -1.71
PCF11-202ENST00000528336 GGTLC2Q14390 218 aa4.34□□□□□ -1.71
PCF11-202ENST00000528336 GPNMBQ14956 572 aa4.34□□□□□ -1.71
PCF11-202ENST00000528336 SPCS2Q15005 226 aa4.34□□□□□ -1.71
PCF11-202ENST00000528336 RNF212Q495C1 297 aa4.34□□□□□ -1.71
PCF11-202ENST00000528336 PDZD11Q5EBL8 140 aa4.34□□□□□ -1.71
PCF11-202ENST00000528336 CT45A1Q5HYN5 189 aa4.34□□□□□ -1.71
PCF11-202ENST00000528336 LINC00242Q5T6M2 205 aa4.34□□□□□ -1.71
PCF11-202ENST00000528336 MARC1Q5VT66 337 aa4.34□□□□□ -1.71
PCF11-202ENST00000528336 ACOT7LQ6ZUV0 252 aa4.34□□□□□ -1.71
PCF11-202ENST00000528336 KIR2DL5AQ8N109 375 aa4.34□□□□□ -1.71
PCF11-202ENST00000528336 MREGQ8N565 214 aa4.34□□□□□ -1.71
PCF11-202ENST00000528336 OR2D3Q8NGH3 330 aa4.34□□□□□ -1.71
PCF11-202ENST00000528336 OR2V1Q8NHB1 315 aa4.34□□□□□ -1.71
PCF11-202ENST00000528336 KIR2DL5BQ8NHK3 375 aa4.34□□□□□ -1.71
PCF11-202ENST00000528336 CT45A3Q8NHU0 189 aa4.34□□□□□ -1.71
PCF11-202ENST00000528336 MCOLN3Q8TDD5 553 aa4.34□□□□□ -1.71
PCF11-202ENST00000528336 PYROXD1Q8WU10 500 aa4.34□□□□□ -1.71
PCF11-202ENST00000528336 APH1BQ8WW43 257 aa4.34□□□□□ -1.71
PCF11-202ENST00000528336 MS4A4EQ96PG1 132 aa4.34□□□□□ -1.71
PCF11-202ENST00000528336 EBNA1BP2Q99848 306 aaKnown RBP4.34□□□□□ -1.71
PCF11-202ENST00000528336 METTL9Q9H1A3 318 aa4.34□□□□□ -1.71
PCF11-202ENST00000528336 PLGRKTQ9HBL7 147 aa4.34□□□□□ -1.71
PCF11-202ENST00000528336 AMBNQ9NP70 447 aa4.34□□□□□ -1.71
PCF11-202ENST00000528336 ESM1Q9NQ30 184 aa4.34□□□□□ -1.71
PCF11-202ENST00000528336 THUMPD1Q9NXG2 353 aaKnown RBP4.34□□□□□ -1.71
PCF11-202ENST00000528336 MLXQ9UH92 298 aa4.34□□□□□ -1.71
PCF11-202ENST00000528336 RSPH14Q9UHP6 348 aa4.34□□□□□ -1.71
PCF11-202ENST00000528336 TBX21Q9UL17 535 aa4.34□□□□□ -1.71
PCF11-202ENST00000528336 L3MBTL1Q9Y468 752 aa4.34□□□□□ -1.71
PCF11-202ENST00000528336 CEP290O15078 2479 aa4.33□□□□□ -1.72
PCF11-202ENST00000528336 F5H768 121 aa4.33□□□□□ -1.72
PCF11-202ENST00000528336 CDIPTO14735 213 aa4.33□□□□□ -1.72
PCF11-202ENST00000528336 FADS1O60427 444 aa4.33□□□□□ -1.72
PCF11-202ENST00000528336 CLIC3O95833 236 aa4.33□□□□□ -1.72
PCF11-202ENST00000528336 THRAP10827 490 aa4.33□□□□□ -1.72
PCF11-202ENST00000528336 SERPINA2P20848 420 aa4.33□□□□□ -1.72
PCF11-202ENST00000528336 ATP6V1B2P21281 511 aa4.33□□□□□ -1.72
PCF11-202ENST00000528336 CYB561P49447 251 aa4.33□□□□□ -1.72
PCF11-202ENST00000528336 STC1P52823 247 aa4.33□□□□□ -1.72
PCF11-202ENST00000528336 HMGCS1Q01581 520 aa4.33□□□□□ -1.72
PCF11-202ENST00000528336 STX4Q12846 297 aa4.33□□□□□ -1.72
PCF11-202ENST00000528336 ZNF154Q13106 437 aa4.33□□□□□ -1.72
PCF11-202ENST00000528336 RAB31Q13636 194 aa4.33□□□□□ -1.72
PCF11-202ENST00000528336 RFX4Q33E94 735 aa4.33□□□□□ -1.72
PCF11-202ENST00000528336 ACSM3Q53FZ2 586 aa4.33□□□□□ -1.72
PCF11-202ENST00000528336 ACER2Q5QJU3 275 aa4.33□□□□□ -1.72
PCF11-202ENST00000528336 WDR82Q6UXN9 313 aa4.33□□□□□ -1.72
PCF11-202ENST00000528336 SH2D6Q7Z4S9 175 aa4.33□□□□□ -1.72
PCF11-202ENST00000528336 RALGPS2Q86X27 583 aaPredicted RBP4.33□□□□□ -1.72
PCF11-202ENST00000528336 WDFY1Q8IWB7 410 aa4.33□□□□□ -1.72
PCF11-202ENST00000528336 RIMKLAQ8IXN7 391 aa4.33□□□□□ -1.72
PCF11-202ENST00000528336 VKORC1L1Q8N0U8 176 aa4.33□□□□□ -1.72
PCF11-202ENST00000528336 EID2Q8N6I1 236 aa4.33□□□□□ -1.72
PCF11-202ENST00000528336 DUSP18Q8NEJ0 188 aa4.33□□□□□ -1.72
PCF11-202ENST00000528336 CCDC54Q8NEL0 328 aa4.33□□□□□ -1.72
PCF11-202ENST00000528336 ATP6V1C2Q8NEY4 427 aa4.33□□□□□ -1.72
PCF11-202ENST00000528336 TCTEX1D2Q8WW35 142 aa4.33□□□□□ -1.72
PCF11-202ENST00000528336 DGCR14Q96DF8 476 aaKnown RBP4.33□□□□□ -1.72
PCF11-202ENST00000528336 CEP170P1Q96L14 293 aa4.33□□□□□ -1.72
PCF11-202ENST00000528336 ZNF681Q96N22 645 aa4.33□□□□□ -1.72
PCF11-202ENST00000528336 TBX15Q96SF7 602 aa4.33□□□□□ -1.72
PCF11-202ENST00000528336 SORT1Q99523 831 aa4.33□□□□□ -1.72
PCF11-202ENST00000528336 APOL4Q9BPW4 351 aa4.33□□□□□ -1.72
PCF11-202ENST00000528336 MFSD1Q9H3U5 465 aa4.33□□□□□ -1.72
PCF11-202ENST00000528336 DHX35Q9H5Z1 703 aaKnown RBP4.33□□□□□ -1.72
PCF11-202ENST00000528336 UBE2ZQ9H832 354 aaPredicted RBP4.33□□□□□ -1.72
PCF11-202ENST00000528336 IFT46Q9NQC8 304 aa4.33□□□□□ -1.72
PCF11-202ENST00000528336 FGFR1OP2Q9NVK5 253 aa4.33□□□□□ -1.72
PCF11-202ENST00000528336 B3GNT2Q9NY97 397 aa4.33□□□□□ -1.72
PCF11-202ENST00000528336 Q9UF83 564 aa4.33□□□□□ -1.72
PCF11-202ENST00000528336 NTNG1Q9Y2I2 539 aa4.33□□□□□ -1.72
PCF11-202ENST00000528336 RPL36Q9Y3U8 105 aaKnown RBP4.33□□□□□ -1.72
PCF11-202ENST00000528336 CROCCQ5TZA2 2017 aa4.33□□□□□ -1.72
PCF11-202ENST00000528336 PDE4DIPQ5VU43 2346 aa4.32□□□□□ -1.72
PCF11-202ENST00000528336 IGKV6-21A0A0C4DH24 114 aa4.32□□□□□ -1.72
PCF11-202ENST00000528336 TMEM150BA6NC51 233 aa4.32□□□□□ -1.72
PCF11-202ENST00000528336 TRABD2BA6NFA1 517 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms