RNA–Protein interactions for RNA: ENST00000527469.1

CAPN1-209, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-209ENST00000527469 H0YAE9 185 aa11.16□□□□□ -0.62
CAPN1-209ENST00000527469 TRAPPC2LH3BP13 241 aa11.16□□□□□ -0.62
CAPN1-209ENST00000527469 ENSAO43768 121 aaKnown RBP11.16□□□□□ -0.62
CAPN1-209ENST00000527469 RPSAP08865 295 aaKnown RBP11.16□□□□□ -0.62
CAPN1-209ENST00000527469 ADRA2CP18825 462 aa11.16□□□□□ -0.62
CAPN1-209ENST00000527469 GLRA1P23415 457 aa11.16□□□□□ -0.62
CAPN1-209ENST00000527469 CFHR2P36980 270 aa11.16□□□□□ -0.62
CAPN1-209ENST00000527469 KIR3DL2P43630 455 aa11.16□□□□□ -0.62
CAPN1-209ENST00000527469 HAAOP46952 286 aa11.16□□□□□ -0.62
CAPN1-209ENST00000527469 ISL1P61371 349 aa11.16□□□□□ -0.62
CAPN1-209ENST00000527469 CNN3Q15417 329 aaKnown RBP11.16□□□□□ -0.62
CAPN1-209ENST00000527469 FAM76BQ5HYJ3 339 aa11.16□□□□□ -0.62
CAPN1-209ENST00000527469 TMPRSS11AQ6ZMR5 421 aa11.16□□□□□ -0.62
CAPN1-209ENST00000527469 KRT74Q7RTS7 529 aa11.16□□□□□ -0.62
CAPN1-209ENST00000527469 C1QL2Q7Z5L3 287 aa11.16□□□□□ -0.62
CAPN1-209ENST00000527469 EGFL6Q8IUX8 553 aa11.16□□□□□ -0.62
CAPN1-209ENST00000527469 RDH10Q8IZV5 341 aa11.16□□□□□ -0.62
CAPN1-209ENST00000527469 HAVCR2Q8TDQ0 301 aa11.16□□□□□ -0.62
CAPN1-209ENST00000527469 NPRL2Q8WTW4 380 aa11.16□□□□□ -0.62
CAPN1-209ENST00000527469 RAB40AQ8WXH6 277 aa11.16□□□□□ -0.62
CAPN1-209ENST00000527469 PP6455Q8WZ26 134 aa11.16□□□□□ -0.62
CAPN1-209ENST00000527469 ST8SIA4Q92187 359 aa11.16□□□□□ -0.62
CAPN1-209ENST00000527469 TMIGD2Q96BF3 282 aa11.16□□□□□ -0.62
CAPN1-209ENST00000527469 PELI1Q96FA3 418 aa11.16□□□□□ -0.62
CAPN1-209ENST00000527469 CCL13Q99616 98 aa11.16□□□□□ -0.62
CAPN1-209ENST00000527469 NUDT16L1Q9BRJ7 211 aaKnown RBP11.16□□□□□ -0.62
CAPN1-209ENST00000527469 COMMD4Q9H0A8 199 aa11.16□□□□□ -0.62
CAPN1-209ENST00000527469 VCX3BQ9H321 246 aa11.16□□□□□ -0.62
CAPN1-209ENST00000527469 SNTG1Q9NSN8 517 aa11.16□□□□□ -0.62
CAPN1-209ENST00000527469 FRRS1LQ9P0K9 344 aa11.16□□□□□ -0.62
CAPN1-209ENST00000527469 POLDIP2Q9Y2S7 368 aa11.16□□□□□ -0.62
CAPN1-209ENST00000527469 POLR3KQ9Y2Y1 108 aaPredicted RBP11.16□□□□□ -0.62
CAPN1-209ENST00000527469 INSIG2Q9Y5U4 225 aa11.16□□□□□ -0.62
CAPN1-209ENST00000527469 HSPE1-MOB4S4R3N1 261 aa11.16□□□□□ -0.62
CAPN1-209ENST00000527469 J3QT63 122 aa11.15□□□□□ -0.62
CAPN1-209ENST00000527469 NDUFB3O43676 98 aa11.15□□□□□ -0.62
CAPN1-209ENST00000527469 TCF21O43680 179 aa11.15□□□□□ -0.62
CAPN1-209ENST00000527469 WBP4O75554 376 aaKnown RBP11.15□□□□□ -0.62
CAPN1-209ENST00000527469 RHBDL1O75783 438 aa11.15□□□□□ -0.62
CAPN1-209ENST00000527469 CCDC159P0C7I6 412 aa11.15□□□□□ -0.62
CAPN1-209ENST00000527469 DCKP27707 260 aa11.15□□□□□ -0.62
CAPN1-209ENST00000527469 CCR9P51686 369 aa11.15□□□□□ -0.62
CAPN1-209ENST00000527469 ADARB1P78563 741 aaKnown RBP11.15□□□□□ -0.62
CAPN1-209ENST00000527469 IKZF1Q13422 519 aa11.15□□□□□ -0.62
CAPN1-209ENST00000527469 ALKBH1Q13686 389 aaKnown RBP11.15□□□□□ -0.62
CAPN1-209ENST00000527469 SMIM21Q3B7S5 101 aa11.15□□□□□ -0.62
CAPN1-209ENST00000527469 TMEM42Q69YG0 159 aa11.15□□□□□ -0.62
CAPN1-209ENST00000527469 FDX2Q6P4F2 183 aa11.15□□□□□ -0.62
CAPN1-209ENST00000527469 BPIFB2Q8N4F0 458 aa11.15□□□□□ -0.62
CAPN1-209ENST00000527469 OR5T2Q8NGG2 359 aa11.15□□□□□ -0.62
CAPN1-209ENST00000527469 OR13C3Q8NGS6 347 aa11.15□□□□□ -0.62
CAPN1-209ENST00000527469 TRMT10AQ8TBZ6 339 aaKnown RBP11.15□□□□□ -0.62
CAPN1-209ENST00000527469 AQP3Q92482 292 aa11.15□□□□□ -0.62
CAPN1-209ENST00000527469 C10orf35Q96D05 121 aa11.15□□□□□ -0.62
CAPN1-209ENST00000527469 FGF23Q9GZV9 251 aaPredicted RBP11.15□□□□□ -0.62
CAPN1-209ENST00000527469 WDR13Q9H1Z4 485 aa11.15□□□□□ -0.62
CAPN1-209ENST00000527469 ISG20L2Q9H9L3 353 aaKnown RBP11.15□□□□□ -0.62
CAPN1-209ENST00000527469 NEK6Q9HC98 313 aa11.15□□□□□ -0.62
CAPN1-209ENST00000527469 FGF20Q9NP95 211 aaPredicted RBP11.15□□□□□ -0.62
CAPN1-209ENST00000527469 MRPS18AQ9NVS2 196 aaKnown RBP11.15□□□□□ -0.62
CAPN1-209ENST00000527469 HHLA2Q9UM44 414 aa11.15□□□□□ -0.62
CAPN1-209ENST00000527469 ARHGAP32A7KAX9 2087 aa11.15□□□□□ -0.63
CAPN1-209ENST00000527469 PQLC2LA1A4F0 135 aa11.14□□□□□ -0.63
CAPN1-209ENST00000527469 DVL1O14640 695 aa11.14□□□□□ -0.63
CAPN1-209ENST00000527469 NXPH2O95156 264 aa11.14□□□□□ -0.63
CAPN1-209ENST00000527469 ECDO95905 644 aaPredicted RBP11.14□□□□□ -0.63
CAPN1-209ENST00000527469 CYB5AP00167 134 aa11.14□□□□□ -0.63
CAPN1-209ENST00000527469 ISG15P05161 165 aa11.14□□□□□ -0.63
CAPN1-209ENST00000527469 EPHA1P21709 976 aa11.14□□□□□ -0.63
CAPN1-209ENST00000527469 FPR2P25090 351 aa11.14□□□□□ -0.63
CAPN1-209ENST00000527469 GABRA2P47869 451 aa11.14□□□□□ -0.63
CAPN1-209ENST00000527469 FUT6P51993 359 aa11.14□□□□□ -0.63
CAPN1-209ENST00000527469 NANOS3P60323 173 aaKnown RBP11.14□□□□□ -0.63
CAPN1-209ENST00000527469 LRRC10Q5BKY1 277 aa11.14□□□□□ -0.63
CAPN1-209ENST00000527469 PNLDC1Q8NA58 520 aaKnown RBP11.14□□□□□ -0.63
CAPN1-209ENST00000527469 OR5AK2Q8NH90 309 aa11.14□□□□□ -0.63
CAPN1-209ENST00000527469 ZNF418Q8TF45 676 aaPredicted RBP11.14□□□□□ -0.63
CAPN1-209ENST00000527469 TSEN15Q8WW01 171 aaKnown RBP11.14□□□□□ -0.63
CAPN1-209ENST00000527469 FGGYQ96C11 551 aa11.14□□□□□ -0.63
CAPN1-209ENST00000527469 SEH1LQ96EE3 360 aa11.14□□□□□ -0.63
CAPN1-209ENST00000527469 BORCS8Q96FH0 119 aa11.14□□□□□ -0.63
CAPN1-209ENST00000527469 TMEM80Q96HE8 168 aa11.14□□□□□ -0.63
CAPN1-209ENST00000527469 MED30Q96HR3 178 aa11.14□□□□□ -0.63
CAPN1-209ENST00000527469 CHST5Q9GZS9 411 aa11.14□□□□□ -0.63
CAPN1-209ENST00000527469 DNTTIP1Q9H147 329 aa11.14□□□□□ -0.63
CAPN1-209ENST00000527469 RASSF4Q9H2L5 321 aa11.14□□□□□ -0.63
CAPN1-209ENST00000527469 RASL12Q9NYN1 266 aa11.14□□□□□ -0.63
CAPN1-209ENST00000527469 NLKQ9UBE8 527 aa11.14□□□□□ -0.63
CAPN1-209ENST00000527469 KAAG1Q9UBP8 84 aa11.14□□□□□ -0.63
CAPN1-209ENST00000527469 CTSZQ9UBR2 303 aa11.14□□□□□ -0.63
CAPN1-209ENST00000527469 NKX1-2Q9UD57 310 aaPredicted RBP11.14□□□□□ -0.63
CAPN1-209ENST00000527469 EXOSC1Q9Y3B2 195 aaKnown RBP11.14□□□□□ -0.63
CAPN1-209ENST00000527469 SVEP1Q4LDE5 3571 aa11.14□□□□□ -0.63
CAPN1-209ENST00000527469 TRBV2A0A0J9YWF9 115 aa11.13□□□□□ -0.63
CAPN1-209ENST00000527469 KIR2DS1A0A191URI9 304 aa11.13□□□□□ -0.63
CAPN1-209ENST00000527469 EFCAB10A6NFE3 127 aa11.13□□□□□ -0.63
CAPN1-209ENST00000527469 TMEM212A6NML5 194 aa11.13□□□□□ -0.63
CAPN1-209ENST00000527469 OR2AT4A6NND4 320 aa11.13□□□□□ -0.63
CAPN1-209ENST00000527469 RNF212BA8MTL3 300 aa11.13□□□□□ -0.63
CAPN1-209ENST00000527469 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms