RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 ADAM8P78325 824 aa5.14□□□□□ -1.59
CD44-225ENST00000527326 GPM6BQ13491 265 aa5.14□□□□□ -1.59
CD44-225ENST00000527326 MMDQ15546 238 aa5.14□□□□□ -1.59
CD44-225ENST00000527326 ARHGAP11BQ3KRB8 267 aa5.14□□□□□ -1.59
CD44-225ENST00000527326 PLAC9Q5JTB6 97 aa5.14□□□□□ -1.59
CD44-225ENST00000527326 TPTE2P1Q5T6R2 138 aa5.14□□□□□ -1.59
CD44-225ENST00000527326 PIP5KL1Q5T9C9 394 aa5.14□□□□□ -1.59
CD44-225ENST00000527326 NBPF12Q5TAG4 269 aaPredicted RBP5.14□□□□□ -1.59
CD44-225ENST00000527326 RTL6Q6ICC9 239 aa5.14□□□□□ -1.59
CD44-225ENST00000527326 FAM71F2Q6NXP2 309 aa5.14□□□□□ -1.59
CD44-225ENST00000527326 FAM151BQ6UXP7 276 aa5.14□□□□□ -1.59
CD44-225ENST00000527326 C22orf34Q6ZV56 151 aa5.14□□□□□ -1.59
CD44-225ENST00000527326 MRPL21Q7Z2W9 205 aaKnown RBP5.14□□□□□ -1.59
CD44-225ENST00000527326 MDGA2Q7Z553 956 aa5.14□□□□□ -1.59
CD44-225ENST00000527326 DEFB128Q7Z7B8 93 aa5.14□□□□□ -1.59
CD44-225ENST00000527326 CISD2Q8N5K1 135 aaKnown RBP5.14□□□□□ -1.59
CD44-225ENST00000527326 TMEM156Q8N614 296 aa5.14□□□□□ -1.59
CD44-225ENST00000527326 CLDN19Q8N6F1 224 aa5.14□□□□□ -1.59
CD44-225ENST00000527326 TEX26Q8N6G2 289 aa5.14□□□□□ -1.59
CD44-225ENST00000527326 ZNF433Q8N7K0 673 aaPredicted RBP5.14□□□□□ -1.59
CD44-225ENST00000527326 POC1AQ8NBT0 407 aa5.14□□□□□ -1.59
CD44-225ENST00000527326 OR52L1Q8NGH7 329 aa5.14□□□□□ -1.59
CD44-225ENST00000527326 OR52M1Q8NGK5 317 aa5.14□□□□□ -1.59
CD44-225ENST00000527326 OR2T27Q8NH04 317 aa5.14□□□□□ -1.59
CD44-225ENST00000527326 OR8S1Q8NH09 359 aa5.14□□□□□ -1.59
CD44-225ENST00000527326 ZNF519Q8TB69 540 aa5.14□□□□□ -1.59
CD44-225ENST00000527326 AQP3Q92482 292 aa5.14□□□□□ -1.59
CD44-225ENST00000527326 SPSB1Q96BD6 273 aa5.14□□□□□ -1.59
CD44-225ENST00000527326 RASD2Q96D21 266 aa5.14□□□□□ -1.59
CD44-225ENST00000527326 RBMXL1Q96E39 390 aaKnown RBP5.14□□□□□ -1.59
CD44-225ENST00000527326 SDSLQ96GA7 329 aa5.14□□□□□ -1.59
CD44-225ENST00000527326 OR7D2Q96RA2 312 aa5.14□□□□□ -1.59
CD44-225ENST00000527326 CD180Q99467 661 aa5.14□□□□□ -1.59
CD44-225ENST00000527326 TBX5Q99593 518 aa5.14□□□□□ -1.59
CD44-225ENST00000527326 GPA33Q99795 319 aa5.14□□□□□ -1.59
CD44-225ENST00000527326 SPXQ9BT56 116 aa5.14□□□□□ -1.59
CD44-225ENST00000527326 NMNAT2Q9BZQ4 307 aa5.14□□□□□ -1.59
CD44-225ENST00000527326 MAP1LC3BQ9GZQ8 125 aa5.14□□□□□ -1.59
CD44-225ENST00000527326 CST11Q9H112 138 aa5.14□□□□□ -1.59
CD44-225ENST00000527326 SYNPO2LQ9H987 977 aa5.14□□□□□ -1.59
CD44-225ENST00000527326 Q9N2K0 584 aa5.14□□□□□ -1.59
CD44-225ENST00000527326 TUBG2Q9NRH3 451 aa5.14□□□□□ -1.59
CD44-225ENST00000527326 CMC2Q9NRP2 79 aa5.14□□□□□ -1.59
CD44-225ENST00000527326 RXFP3Q9NSD7 469 aa5.14□□□□□ -1.59
CD44-225ENST00000527326 ANKRD10Q9NXR5 420 aa5.14□□□□□ -1.59
CD44-225ENST00000527326 FBXL17Q9UF56 701 aa5.14□□□□□ -1.59
CD44-225ENST00000527326 NAT8Q9UHE5 227 aa5.14□□□□□ -1.59
CD44-225ENST00000527326 CLEC4EQ9ULY5 219 aa5.14□□□□□ -1.59
CD44-225ENST00000527326 SLC22A13Q9Y226 551 aa5.14□□□□□ -1.59
CD44-225ENST00000527326 VSIG4Q9Y279 399 aa5.14□□□□□ -1.59
CD44-225ENST00000527326 EMC9Q9Y3B6 208 aa5.14□□□□□ -1.59
CD44-225ENST00000527326 WSB1Q9Y6I7 421 aa5.14□□□□□ -1.59
CD44-225ENST00000527326 SPACA6W5XKT8 324 aa5.14□□□□□ -1.59
CD44-225ENST00000527326 WDR81Q562E7 1941 aa5.14□□□□□ -1.59
CD44-225ENST00000527326 KIAA1671Q9BY89 1806 aa5.13□□□□□ -1.59
CD44-225ENST00000527326 TRAV18A0A075B6X5 111 aa5.13□□□□□ -1.59
CD44-225ENST00000527326 TRBV2A0A0J9YWF9 115 aa5.13□□□□□ -1.59
CD44-225ENST00000527326 K7N7A8 449 aa5.13□□□□□ -1.59
CD44-225ENST00000527326 HCRTO43612 131 aa5.13□□□□□ -1.59
CD44-225ENST00000527326 PQBP1O60828 265 aaKnown RBP5.13□□□□□ -1.59
CD44-225ENST00000527326 SEMA4FO95754 770 aa5.13□□□□□ -1.59
CD44-225ENST00000527326 MT-CO2P00403 227 aa5.13□□□□□ -1.59
CD44-225ENST00000527326 OR4Q2P0C623 313 aa5.13□□□□□ -1.59
CD44-225ENST00000527326 STAG3L2P0CL84 134 aa5.13□□□□□ -1.59
CD44-225ENST00000527326 CTSAP10619 480 aa5.13□□□□□ -1.59
CD44-225ENST00000527326 TIA1P31483 386 aaKnown RBP eCLIP5.13□□□□□ -1.59
CD44-225ENST00000527326 FCGR2CP31995 323 aa5.13□□□□□ -1.59
CD44-225ENST00000527326 SOAT1P35610 550 aa5.13□□□□□ -1.59
CD44-225ENST00000527326 ACVRL1P37023 503 aa5.13□□□□□ -1.59
CD44-225ENST00000527326 THPOP40225 353 aa5.13□□□□□ -1.59
CD44-225ENST00000527326 GDF5P43026 501 aa5.13□□□□□ -1.59
CD44-225ENST00000527326 HMGCS2P54868 508 aa5.13□□□□□ -1.59
CD44-225ENST00000527326 UCP3P55916 312 aa5.13□□□□□ -1.59
CD44-225ENST00000527326 RAB38P57729 211 aa5.13□□□□□ -1.59
CD44-225ENST00000527326 SNRPD1P62314 119 aaKnown RBP5.13□□□□□ -1.59
CD44-225ENST00000527326 RPL23AP62750 156 aaKnown RBP5.13□□□□□ -1.59
CD44-225ENST00000527326 PIN1Q13526 163 aaPredicted RBP5.13□□□□□ -1.59
CD44-225ENST00000527326 PDE7AQ13946 482 aa5.13□□□□□ -1.59
CD44-225ENST00000527326 P2RY6Q15077 328 aa5.13□□□□□ -1.59
CD44-225ENST00000527326 PLPPR5Q32ZL2 321 aa5.13□□□□□ -1.59
CD44-225ENST00000527326 LRRC10Q5BKY1 277 aa5.13□□□□□ -1.59
CD44-225ENST00000527326 TCTEX1D4Q5JR98 221 aa5.13□□□□□ -1.59
CD44-225ENST00000527326 LRRC73Q5JTD7 316 aa5.13□□□□□ -1.59
CD44-225ENST00000527326 CLEC12AQ5QGZ9 265 aa5.13□□□□□ -1.59
CD44-225ENST00000527326 LYPLAL1Q5VWZ2 237 aa5.13□□□□□ -1.59
CD44-225ENST00000527326 UNQ5815/PRO19632Q6UWF5 114 aa5.13□□□□□ -1.59
CD44-225ENST00000527326 DPPA3Q6W0C5 159 aa5.13□□□□□ -1.59
CD44-225ENST00000527326 Q6ZN92 141 aa5.13□□□□□ -1.59
CD44-225ENST00000527326 COX15Q7KZN9 410 aa5.13□□□□□ -1.59
CD44-225ENST00000527326 TMEM173Q86WV6 379 aaPredicted RBP5.13□□□□□ -1.59
CD44-225ENST00000527326 ZNF584Q8IVC4 421 aa5.13□□□□□ -1.59
CD44-225ENST00000527326 KLHDC8AQ8IYD2 350 aa5.13□□□□□ -1.59
CD44-225ENST00000527326 ZNF679Q8IYX0 411 aa5.13□□□□□ -1.59
CD44-225ENST00000527326 ARHGEF39Q8N4T4 335 aa5.13□□□□□ -1.59
CD44-225ENST00000527326 TCTEX1D1Q8N7M0 179 aa5.13□□□□□ -1.59
CD44-225ENST00000527326 OR1K1Q8NGR3 316 aa5.13□□□□□ -1.59
CD44-225ENST00000527326 ZNF563Q8TA94 476 aa5.13□□□□□ -1.59
CD44-225ENST00000527326 RPS4Y2Q8TD47 263 aa5.13□□□□□ -1.59
CD44-225ENST00000527326 C2orf15Q8WU43 125 aaKnown RBP5.13□□□□□ -1.59
CD44-225ENST00000527326 PTPMT1Q8WUK0 201 aaPredicted RBP5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms