RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 C19orf12Q9NSK7 152 aa13.06□□□□□ -0.32
PTPRU-210ENST00000527027 SERTAD4Q9NUC0 356 aa13.06□□□□□ -0.32
PTPRU-210ENST00000527027 AURKAIP1Q9NWT8 199 aaPredicted RBP13.06□□□□□ -0.32
PTPRU-210ENST00000527027 KMT2CQ8NEZ4 4911 aaKnown RBP13.05□□□□□ -0.32
PTPRU-210ENST00000527027 B2RBV5 119 aa13.05□□□□□ -0.32
PTPRU-210ENST00000527027 CCNB2O95067 398 aa13.05□□□□□ -0.32
PTPRU-210ENST00000527027 CD28P10747 220 aa13.05□□□□□ -0.32
PTPRU-210ENST00000527027 ZNF3P17036 446 aa13.05□□□□□ -0.32
PTPRU-210ENST00000527027 GPM6AP51674 278 aa13.05□□□□□ -0.32
PTPRU-210ENST00000527027 BMXP51813 675 aa13.05□□□□□ -0.32
PTPRU-210ENST00000527027 LGALS4P56470 323 aa13.05□□□□□ -0.32
PTPRU-210ENST00000527027 DNAL1Q4LDG9 190 aa13.05□□□□□ -0.32
PTPRU-210ENST00000527027 NDUFA11Q86Y39 141 aa13.05□□□□□ -0.32
PTPRU-210ENST00000527027 PGAM4Q8N0Y7 254 aa13.05□□□□□ -0.32
PTPRU-210ENST00000527027 AQP11Q8NBQ7 271 aa13.05□□□□□ -0.32
PTPRU-210ENST00000527027 OR4F17Q8NGA8 305 aa13.05□□□□□ -0.32
PTPRU-210ENST00000527027 ZNF671Q8TAW3 534 aa13.05□□□□□ -0.32
PTPRU-210ENST00000527027 R3HDM4Q96D70 268 aa13.05□□□□□ -0.32
PTPRU-210ENST00000527027 LYZL4Q96KX0 146 aa13.05□□□□□ -0.32
PTPRU-210ENST00000527027 OR4F4Q96R69 305 aa13.05□□□□□ -0.32
PTPRU-210ENST00000527027 OR51I2Q9H344 312 aa13.05□□□□□ -0.32
PTPRU-210ENST00000527027 YY1AP1Q9H869 796 aa13.05□□□□□ -0.32
PTPRU-210ENST00000527027 MED20Q9H944 212 aa13.05□□□□□ -0.32
PTPRU-210ENST00000527027 ZNF702PQ9H963 129 aa13.05□□□□□ -0.32
PTPRU-210ENST00000527027 CMC2Q9NRP2 79 aa13.05□□□□□ -0.32
PTPRU-210ENST00000527027 ARMC1Q9NVT9 282 aa13.05□□□□□ -0.32
PTPRU-210ENST00000527027 LRP12Q9Y561 859 aa13.05□□□□□ -0.32
PTPRU-210ENST00000527027 A0A1W2PPH5 198 aa13.04□□□□□ -0.32
PTPRU-210ENST00000527027 FAM183AA6NL82 134 aa13.04□□□□□ -0.32
PTPRU-210ENST00000527027 SOX14O95416 240 aa13.04□□□□□ -0.32
PTPRU-210ENST00000527027 CAPZA1P52907 286 aa13.04□□□□□ -0.32
PTPRU-210ENST00000527027 GNG3P63215 75 aa13.04□□□□□ -0.32
PTPRU-210ENST00000527027 HABP2Q14520 560 aaPredicted RBP13.04□□□□□ -0.32
PTPRU-210ENST00000527027 TMEM200BQ69YZ2 307 aa13.04□□□□□ -0.32
PTPRU-210ENST00000527027 KRT74Q7RTS7 529 aa13.04□□□□□ -0.32
PTPRU-210ENST00000527027 THAP5Q7Z6K1 395 aa13.04□□□□□ -0.32
PTPRU-210ENST00000527027 Q8N2B8 174 aa13.04□□□□□ -0.32
PTPRU-210ENST00000527027 C11orf42Q8N5U0 333 aa13.04□□□□□ -0.32
PTPRU-210ENST00000527027 PHF21AQ96BD5 680 aa13.04□□□□□ -0.32
PTPRU-210ENST00000527027 CDRT15Q96T59 188 aa13.04□□□□□ -0.32
PTPRU-210ENST00000527027 CDCA4Q9BXL8 241 aa13.04□□□□□ -0.32
PTPRU-210ENST00000527027 hCG_1809904A0A1W2PP81 198 aa13.03□□□□□ -0.32
PTPRU-210ENST00000527027 A0A1W2PPE2 198 aa13.03□□□□□ -0.32
PTPRU-210ENST00000527027 A0A1W2PR64 198 aa13.03□□□□□ -0.32
PTPRU-210ENST00000527027 A0A1W2PRV1 198 aa13.03□□□□□ -0.32
PTPRU-210ENST00000527027 VGLL3A8MV65 326 aa13.03□□□□□ -0.32
PTPRU-210ENST00000527027 ZNF732B4DXR9 585 aa13.03□□□□□ -0.32
PTPRU-210ENST00000527027 MTRF1O75570 445 aaKnown RBP13.03□□□□□ -0.32
PTPRU-210ENST00000527027 LYNP07948 512 aa13.03□□□□□ -0.32
PTPRU-210ENST00000527027 PAICSP22234 425 aaKnown RBP13.03□□□□□ -0.32
PTPRU-210ENST00000527027 RPL31P62899 125 aaKnown RBP13.03□□□□□ -0.32
PTPRU-210ENST00000527027 PPP1R8Q12972 351 aaKnown RBP13.03□□□□□ -0.32
PTPRU-210ENST00000527027 CEACAM21Q3KPI0 293 aa13.03□□□□□ -0.32
PTPRU-210ENST00000527027 OTOSQ8NHW6 89 aa13.03□□□□□ -0.32
PTPRU-210ENST00000527027 THEM6Q8WUY1 208 aa13.03□□□□□ -0.32
PTPRU-210ENST00000527027 AQP3Q92482 292 aa13.03□□□□□ -0.32
PTPRU-210ENST00000527027 OTULINQ96BN8 352 aa13.03□□□□□ -0.32
PTPRU-210ENST00000527027 CITED2Q99967 270 aaPredicted RBP13.03□□□□□ -0.32
PTPRU-210ENST00000527027 DGCR6LQ9BY27 220 aa13.03□□□□□ -0.32
PTPRU-210ENST00000527027 RASL12Q9NYN1 266 aa13.03□□□□□ -0.32
PTPRU-210ENST00000527027 COL7A1Q02388 2944 aa13.02□□□□□ -0.32
PTPRU-210ENST00000527027 TENM3Q9P273 2699 aa13.02□□□□□ -0.32
PTPRU-210ENST00000527027 FAM90A8PA6NJQ4 464 aa13.02□□□□□ -0.33
PTPRU-210ENST00000527027 RFPL4AA6NLU0 287 aa13.02□□□□□ -0.33
PTPRU-210ENST00000527027 ADARB2-AS1A8MUL3 147 aa13.02□□□□□ -0.33
PTPRU-210ENST00000527027 RFPL4AL1F8VTS6 287 aa13.02□□□□□ -0.33
PTPRU-210ENST00000527027 GYG2O15488 501 aa13.02□□□□□ -0.33
PTPRU-210ENST00000527027 T-ENOLP0DO92 83 aa13.02□□□□□ -0.33
PTPRU-210ENST00000527027 FAHP16930 419 aa13.02□□□□□ -0.33
PTPRU-210ENST00000527027 COX7A1P24310 79 aa13.02□□□□□ -0.33
PTPRU-210ENST00000527027 MAP2K3P46734 347 aa13.02□□□□□ -0.33
PTPRU-210ENST00000527027 RAB13P51153 203 aa13.02□□□□□ -0.33
PTPRU-210ENST00000527027 ERVFRD-1P60508 538 aa13.02□□□□□ -0.33
PTPRU-210ENST00000527027 CCBE1Q6UXH8 406 aaPredicted RBP13.02□□□□□ -0.33
PTPRU-210ENST00000527027 LHFPL4Q7Z7J7 247 aa13.02□□□□□ -0.33
PTPRU-210ENST00000527027 ZNF454Q8N9F8 522 aa13.02□□□□□ -0.33
PTPRU-210ENST00000527027 OR8B12Q8NGG6 310 aa13.02□□□□□ -0.33
PTPRU-210ENST00000527027 OR5A2Q8NGI9 324 aa13.02□□□□□ -0.33
PTPRU-210ENST00000527027 FAM81AQ8TBF8 368 aa13.02□□□□□ -0.33
PTPRU-210ENST00000527027 WIPF2Q8TF74 440 aaPredicted RBP13.02□□□□□ -0.33
PTPRU-210ENST00000527027 OR51V1Q9H2C8 321 aa13.02□□□□□ -0.33
PTPRU-210ENST00000527027 NIPAL2Q9H841 368 aa13.02□□□□□ -0.33
PTPRU-210ENST00000527027 USE1Q9NZ43 259 aa13.02□□□□□ -0.33
PTPRU-210ENST00000527027 SLC1A7O00341 560 aa13.01□□□□□ -0.33
PTPRU-210ENST00000527027 PEX14O75381 377 aa13.01□□□□□ -0.33
PTPRU-210ENST00000527027 PRDX2P32119 198 aa13.01□□□□□ -0.33
PTPRU-210ENST00000527027 MAGEA2P43356 314 aa13.01□□□□□ -0.33
PTPRU-210ENST00000527027 PSMA6P60900 246 aaKnown RBP13.01□□□□□ -0.33
PTPRU-210ENST00000527027 CNN3Q15417 329 aaKnown RBP13.01□□□□□ -0.33
PTPRU-210ENST00000527027 MICAQ29983 383 aa13.01□□□□□ -0.33
PTPRU-210ENST00000527027 CEP78Q5JTW2 689 aa13.01□□□□□ -0.33
PTPRU-210ENST00000527027 VAX1Q5SQQ9 334 aa13.01□□□□□ -0.33
PTPRU-210ENST00000527027 ZBTB37Q5TC79 503 aa13.01□□□□□ -0.33
PTPRU-210ENST00000527027 FOXB2Q5VYV0 432 aa13.01□□□□□ -0.33
PTPRU-210ENST00000527027 HAGHLQ6PII5 290 aaPredicted RBP13.01□□□□□ -0.33
PTPRU-210ENST00000527027 ACP7Q6ZNF0 438 aa13.01□□□□□ -0.33
PTPRU-210ENST00000527027 CALHM1Q8IU99 346 aa13.01□□□□□ -0.33
PTPRU-210ENST00000527027 DYNAPQ8N1N2 210 aa13.01□□□□□ -0.33
PTPRU-210ENST00000527027 ZNF561Q8N587 486 aa13.01□□□□□ -0.33
PTPRU-210ENST00000527027 CD177Q8N6Q3 437 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms