RNA–Protein interactions for RNA: ENST00000526696.6

SSRP1-203, Transcript of structure specific recognition protein 1, humanhuman

TSL 3

Gene SSRP1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-203ENST00000526696 HHLA2Q9UM44 414 aa10.56□□□□□ -0.72
SSRP1-203ENST00000526696 IER3IP1Q9Y5U9 82 aa10.56□□□□□ -0.72
SSRP1-203ENST00000526696 KIAA2026Q5HYC2 2103 aa10.55□□□□□ -0.72
SSRP1-203ENST00000526696 FAT2Q9NYQ8 4349 aa10.55□□□□□ -0.72
SSRP1-203ENST00000526696 hCG_38984A0A1B0GV85 526 aa10.55□□□□□ -0.72
SSRP1-203ENST00000526696 MTRF1O75570 445 aaKnown RBP10.55□□□□□ -0.72
SSRP1-203ENST00000526696 CRABP1P29762 137 aa10.55□□□□□ -0.72
SSRP1-203ENST00000526696 ST3GAL3Q11203 375 aa10.55□□□□□ -0.72
SSRP1-203ENST00000526696 LINC00471Q8N535 108 aa10.55□□□□□ -0.72
SSRP1-203ENST00000526696 OR4P4Q8NGL7 312 aa10.55□□□□□ -0.72
SSRP1-203ENST00000526696 NDNFQ8TB73 568 aa10.55□□□□□ -0.72
SSRP1-203ENST00000526696 TSPEARQ8WU66 669 aa10.55□□□□□ -0.72
SSRP1-203ENST00000526696 CHPT1Q8WUD6 406 aa10.55□□□□□ -0.72
SSRP1-203ENST00000526696 HPSE2Q8WWQ2 592 aa10.55□□□□□ -0.72
SSRP1-203ENST00000526696 OR5P3Q8WZ94 311 aa10.55□□□□□ -0.72
SSRP1-203ENST00000526696 SGK3Q96BR1 496 aa10.55□□□□□ -0.72
SSRP1-203ENST00000526696 EBF4Q9BQW3 602 aa10.55□□□□□ -0.72
SSRP1-203ENST00000526696 A0A087WUU8 490 aa10.54□□□□□ -0.72
SSRP1-203ENST00000526696 RFPL4AA6NLU0 287 aa10.54□□□□□ -0.72
SSRP1-203ENST00000526696 RFPL4AL1F8VTS6 287 aa10.54□□□□□ -0.72
SSRP1-203ENST00000526696 H3BUI4 141 aa10.54□□□□□ -0.72
SSRP1-203ENST00000526696 XRCC2O43543 280 aa10.54□□□□□ -0.72
SSRP1-203ENST00000526696 GP9P14770 177 aa10.54□□□□□ -0.72
SSRP1-203ENST00000526696 NOS3P29474 1203 aa10.54□□□□□ -0.72
SSRP1-203ENST00000526696 YAP1P46937 504 aaKnown RBP10.54□□□□□ -0.72
SSRP1-203ENST00000526696 ACTA2P62736 377 aa10.54□□□□□ -0.72
SSRP1-203ENST00000526696 ACTG2P63267 376 aa10.54□□□□□ -0.72
SSRP1-203ENST00000526696 ACTC1P68032 377 aa10.54□□□□□ -0.72
SSRP1-203ENST00000526696 ACTA1P68133 377 aa10.54□□□□□ -0.72
SSRP1-203ENST00000526696 AGKQ53H12 422 aa10.54□□□□□ -0.72
SSRP1-203ENST00000526696 TCF23Q7RTU1 214 aa10.54□□□□□ -0.72
SSRP1-203ENST00000526696 CPLX4Q7Z7G2 160 aa10.54□□□□□ -0.72
SSRP1-203ENST00000526696 PRRC1Q96M27 445 aa10.54□□□□□ -0.72
SSRP1-203ENST00000526696 GPX7Q96SL4 187 aaPredicted RBP10.54□□□□□ -0.72
SSRP1-203ENST00000526696 CGREF1Q99674 301 aa10.54□□□□□ -0.72
SSRP1-203ENST00000526696 RTL8AQ9BWD3 113 aa10.54□□□□□ -0.72
SSRP1-203ENST00000526696 KRTAP4-5Q9BYR2 181 aa10.54□□□□□ -0.72
SSRP1-203ENST00000526696 KAT8Q9H7Z6 458 aaKnown RBP10.54□□□□□ -0.72
SSRP1-203ENST00000526696 C19orf73Q9NVV2 129 aa10.54□□□□□ -0.72
SSRP1-203ENST00000526696 SIGLEC7Q9Y286 467 aa10.54□□□□□ -0.72
SSRP1-203ENST00000526696 DNAH11Q96DT5 4516 aa10.54□□□□□ -0.72
SSRP1-203ENST00000526696 IGHV2-26A0A0B4J1V2 119 aa10.53□□□□□ -0.72
SSRP1-203ENST00000526696 TMEM210A6NLX4 147 aa10.53□□□□□ -0.72
SSRP1-203ENST00000526696 J3KTA2 159 aa10.53□□□□□ -0.72
SSRP1-203ENST00000526696 FFAR1O14842 300 aa10.53□□□□□ -0.72
SSRP1-203ENST00000526696 ANGPT2O15123 496 aa10.53□□□□□ -0.72
SSRP1-203ENST00000526696 SLC22A2O15244 555 aa10.53□□□□□ -0.72
SSRP1-203ENST00000526696 TXNDC12O95881 172 aa10.53□□□□□ -0.72
SSRP1-203ENST00000526696 ZNF728P0DKX0 622 aa10.53□□□□□ -0.72
SSRP1-203ENST00000526696 IGHV4-30-4P0DP06 118 aa10.53□□□□□ -0.72
SSRP1-203ENST00000526696 GSK3AP49840 483 aa10.53□□□□□ -0.72
SSRP1-203ENST00000526696 INSL3P51460 131 aa10.53□□□□□ -0.72
SSRP1-203ENST00000526696 VMACQ2NL98 169 aa10.53□□□□□ -0.72
SSRP1-203ENST00000526696 FAM27D1Q5T7N8 215 aa10.53□□□□□ -0.72
SSRP1-203ENST00000526696 ASPHD1Q5U4P2 390 aa10.53□□□□□ -0.72
SSRP1-203ENST00000526696 DNM1P34Q6PK57 102 aa10.53□□□□□ -0.72
SSRP1-203ENST00000526696 OR10A6Q8NH74 314 aa10.53□□□□□ -0.72
SSRP1-203ENST00000526696 STMN2Q93045 179 aa10.53□□□□□ -0.72
SSRP1-203ENST00000526696 REEP6Q96HR9 211 aa10.53□□□□□ -0.72
SSRP1-203ENST00000526696 NMNAT3Q96T66 252 aa10.53□□□□□ -0.72
SSRP1-203ENST00000526696 SPATA25Q9BR10 227 aa10.53□□□□□ -0.72
SSRP1-203ENST00000526696 ZNF319Q9P2F9 582 aa10.53□□□□□ -0.72
SSRP1-203ENST00000526696 SNX13Q9Y5W8 968 aa10.53□□□□□ -0.72
SSRP1-203ENST00000526696 DNAH2Q9P225 4427 aa10.52□□□□□ -0.72
SSRP1-203ENST00000526696 LINC01548A6NM66 108 aa10.52□□□□□ -0.73
SSRP1-203ENST00000526696 ZNF850A8MQ14 1090 aa10.52□□□□□ -0.73
SSRP1-203ENST00000526696 TBX1O43435 398 aa10.52□□□□□ -0.73
SSRP1-203ENST00000526696 SLC25A17O43808 307 aa10.52□□□□□ -0.73
SSRP1-203ENST00000526696 NDUFB2O95178 105 aa10.52□□□□□ -0.73
SSRP1-203ENST00000526696 RBP4P02753 201 aa10.52□□□□□ -0.73
SSRP1-203ENST00000526696 ACKR3P25106 362 aa10.52□□□□□ -0.73
SSRP1-203ENST00000526696 PRDX4Q13162 271 aa10.52□□□□□ -0.73
SSRP1-203ENST00000526696 SNAPC1Q16533 368 aa10.52□□□□□ -0.73
SSRP1-203ENST00000526696 SRSF7Q16629 238 aaKnown RBP eCLIP10.52□□□□□ -0.73
SSRP1-203ENST00000526696 SLC36A3Q495N2 470 aa10.52□□□□□ -0.73
SSRP1-203ENST00000526696 HSP90B2PQ58FF3 399 aa10.52□□□□□ -0.73
SSRP1-203ENST00000526696 ACP7Q6ZNF0 438 aa10.52□□□□□ -0.73
SSRP1-203ENST00000526696 KCTD8Q6ZWB6 473 aa10.52□□□□□ -0.73
SSRP1-203ENST00000526696 ZBTB46Q86UZ6 589 aa10.52□□□□□ -0.73
SSRP1-203ENST00000526696 ZDHHC21Q8IVQ6 265 aa10.52□□□□□ -0.73
SSRP1-203ENST00000526696 Q8N1Y9 231 aa10.52□□□□□ -0.73
SSRP1-203ENST00000526696 COMMD1Q8N668 190 aa10.52□□□□□ -0.73
SSRP1-203ENST00000526696 ZBTB9Q96C00 473 aa10.52□□□□□ -0.73
SSRP1-203ENST00000526696 RNF170Q96K19 258 aa10.52□□□□□ -0.73
SSRP1-203ENST00000526696 C1orf21Q9H246 121 aa10.52□□□□□ -0.73
SSRP1-203ENST00000526696 FN3KQ9H479 309 aa10.52□□□□□ -0.73
SSRP1-203ENST00000526696 RPRD1BQ9NQG5 326 aaKnown RBP10.52□□□□□ -0.73
SSRP1-203ENST00000526696 KIAA1456Q9P272 454 aa10.52□□□□□ -0.73
SSRP1-203ENST00000526696 BAG5Q9UL15 447 aa10.52□□□□□ -0.73
SSRP1-203ENST00000526696 HERC1Q15751 4861 aa10.51□□□□□ -0.73
SSRP1-203ENST00000526696 ANXA2P2A6NMY6 339 aa10.51□□□□□ -0.73
SSRP1-203ENST00000526696 SERPINE3A8MV23 424 aa10.51□□□□□ -0.73
SSRP1-203ENST00000526696 CCRL2O00421 344 aa10.51□□□□□ -0.73
SSRP1-203ENST00000526696 TROVE2P10155 538 aaKnown RBP eCLIP10.51□□□□□ -0.73
SSRP1-203ENST00000526696 HTR1DP28221 377 aa10.51□□□□□ -0.73
SSRP1-203ENST00000526696 PRDX2P32119 198 aa10.51□□□□□ -0.73
SSRP1-203ENST00000526696 CDX1P47902 265 aaPredicted RBP10.51□□□□□ -0.73
SSRP1-203ENST00000526696 IL18R1Q13478 541 aa10.51□□□□□ -0.73
SSRP1-203ENST00000526696 LYPD4Q6UWN0 246 aa10.51□□□□□ -0.73
SSRP1-203ENST00000526696 BAIAP2L2Q6UXY1 529 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms