RNA–Protein interactions for RNA: ENST00000526124.1

LTBP3-205, Transcript of latent transforming growth factor beta binding protein 3, human

TSL 5

Gene LTBP3, Length 347 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP3-205	ENST00000526124	TMEM138	Q9NPI0	162 aa		14	□□□□□ -0.17
LTBP3-205	ENST00000526124	TXNL4B	Q9NX01	149 aa	Known RBP	14	□□□□□ -0.17
LTBP3-205	ENST00000526124	SSR3	Q9UNL2	185 aa		14	□□□□□ -0.17
LTBP3-205	ENST00000526124	CACNG2	Q9Y698	323 aa		14	□□□□□ -0.17
LTBP3-205	ENST00000526124	IFNL4	K9M1U5	179 aa		13.99	□□□□□ -0.17
LTBP3-205	ENST00000526124	MAGEB3	O15480	346 aa		13.99	□□□□□ -0.17
LTBP3-205	ENST00000526124	MAS1	P04201	325 aa		13.99	□□□□□ -0.17
LTBP3-205	ENST00000526124	BDKRB2	P30411	391 aa		13.99	□□□□□ -0.17
LTBP3-205	ENST00000526124	HAAO	P46952	286 aa		13.99	□□□□□ -0.17
LTBP3-205	ENST00000526124	TMEM33	P57088	247 aa		13.99	□□□□□ -0.17
LTBP3-205	ENST00000526124	PPP3R1	P63098	170 aa		13.99	□□□□□ -0.17
LTBP3-205	ENST00000526124	KISS1	Q15726	138 aa		13.99	□□□□□ -0.17
LTBP3-205	ENST00000526124	ZNF181	Q2M3W8	571 aa		13.99	□□□□□ -0.17
LTBP3-205	ENST00000526124	CRIP3	Q6Q6R5	217 aa		13.99	□□□□□ -0.17
LTBP3-205	ENST00000526124	GDPGP1	Q6ZNW5	385 aa		13.99	□□□□□ -0.17
LTBP3-205	ENST00000526124	LHFPL2	Q6ZUX7	228 aa		13.99	□□□□□ -0.17
LTBP3-205	ENST00000526124	ANGPTL5	Q86XS5	388 aa		13.99	□□□□□ -0.17
LTBP3-205	ENST00000526124	OR52N4	Q8NGI2	321 aa		13.99	□□□□□ -0.17
LTBP3-205	ENST00000526124	ZNF420	Q8TAQ5	688 aa	Predicted RBP	13.99	□□□□□ -0.17
LTBP3-205	ENST00000526124		Q8TCH9	128 aa		13.99	□□□□□ -0.17
LTBP3-205	ENST00000526124	MYOZ1	Q9NP98	299 aa	Predicted RBP	13.99	□□□□□ -0.17
LTBP3-205	ENST00000526124	EXOSC4	Q9NPD3	245 aa	Known RBP	13.99	□□□□□ -0.17
LTBP3-205	ENST00000526124	C1orf123	Q9NWV4	160 aa		13.99	□□□□□ -0.17
LTBP3-205	ENST00000526124	SETX	Q7Z333	2677 aa	Known RBP	13.98	□□□□□ -0.17
LTBP3-205	ENST00000526124	TRAV1-2	A0A0B4J238	106 aa		13.98	□□□□□ -0.17
LTBP3-205	ENST00000526124	MEGF11	A6BM72	1044 aa		13.98	□□□□□ -0.17
LTBP3-205	ENST00000526124	TRIM64B	A6NI03	449 aa		13.98	□□□□□ -0.17
LTBP3-205	ENST00000526124	RP2	O75695	350 aa		13.98	□□□□□ -0.17
LTBP3-205	ENST00000526124	LHB	P01229	141 aa		13.98	□□□□□ -0.17
LTBP3-205	ENST00000526124	HCK	P08631	526 aa		13.98	□□□□□ -0.17
LTBP3-205	ENST00000526124	CD37	P11049	281 aa		13.98	□□□□□ -0.17
LTBP3-205	ENST00000526124	CFHR2	P36980	270 aa		13.98	□□□□□ -0.17
LTBP3-205	ENST00000526124	RBMX	P38159	391 aa	Known RBP	13.98	□□□□□ -0.17
LTBP3-205	ENST00000526124	C22orf42	Q6IC83	251 aa		13.98	□□□□□ -0.17
LTBP3-205	ENST00000526124	PRSS57	Q6UWY2	283 aa		13.98	□□□□□ -0.17
LTBP3-205	ENST00000526124	WDR82	Q6UXN9	313 aa		13.98	□□□□□ -0.17
LTBP3-205	ENST00000526124	DNM1P46	Q6ZS02	220 aa		13.98	□□□□□ -0.17
LTBP3-205	ENST00000526124	GPR141	Q7Z602	305 aa		13.98	□□□□□ -0.17
LTBP3-205	ENST00000526124	LRRTM1	Q86UE6	522 aa		13.98	□□□□□ -0.17
LTBP3-205	ENST00000526124	CALHM1	Q8IU99	346 aa		13.98	□□□□□ -0.17
LTBP3-205	ENST00000526124	CDH26	Q8IXH8	852 aa		13.98	□□□□□ -0.17
LTBP3-205	ENST00000526124	ZNF525	Q8N782	197 aa		13.98	□□□□□ -0.17
LTBP3-205	ENST00000526124	OR11L1	Q8NGX0	322 aa		13.98	□□□□□ -0.17
LTBP3-205	ENST00000526124	ZNF671	Q8TAW3	534 aa		13.98	□□□□□ -0.17
LTBP3-205	ENST00000526124	AQP3	Q92482	292 aa		13.98	□□□□□ -0.17
LTBP3-205	ENST00000526124	SPACA5	Q96QH8	159 aa		13.98	□□□□□ -0.17
LTBP3-205	ENST00000526124	FOXC2	Q99958	501 aa		13.98	□□□□□ -0.17
LTBP3-205	ENST00000526124	CHCHD6	Q9BRQ6	235 aa		13.98	□□□□□ -0.17
LTBP3-205	ENST00000526124	FUNDC2	Q9BWH2	189 aa		13.98	□□□□□ -0.17
LTBP3-205	ENST00000526124	SLITRK2	Q9H156	845 aa		13.98	□□□□□ -0.17
LTBP3-205	ENST00000526124	SNTG1	Q9NSN8	517 aa		13.98	□□□□□ -0.17
LTBP3-205	ENST00000526124	TMEM106B	Q9NUM4	274 aa		13.98	□□□□□ -0.17
LTBP3-205	ENST00000526124	RNF7	Q9UBF6	113 aa		13.98	□□□□□ -0.17
LTBP3-205	ENST00000526124	GSTK1	Q9Y2Q3	226 aa		13.98	□□□□□ -0.17
LTBP3-205	ENST00000526124	CHD3	Q12873	2000 aa	Known RBP	13.98	□□□□□ -0.17
LTBP3-205	ENST00000526124	DYSF	O75923	2080 aa		13.97	□□□□□ -0.17
LTBP3-205	ENST00000526124	NOTCH2	Q04721	2471 aa		13.97	□□□□□ -0.17
LTBP3-205	ENST00000526124		A6NLC8	198 aa		13.97	□□□□□ -0.17
LTBP3-205	ENST00000526124	LRRC30	A6NM36	301 aa		13.97	□□□□□ -0.17
LTBP3-205	ENST00000526124	TMEM178B	H3BS89	294 aa		13.97	□□□□□ -0.17
LTBP3-205	ENST00000526124	ACAA1	P09110	424 aa	Predicted RBP	13.97	□□□□□ -0.17
LTBP3-205	ENST00000526124	ADRA2C	P18825	462 aa		13.97	□□□□□ -0.17
LTBP3-205	ENST00000526124	CALR	P27797	417 aa	Known RBP	13.97	□□□□□ -0.17
LTBP3-205	ENST00000526124	PDLIM4	P50479	330 aa		13.97	□□□□□ -0.17
LTBP3-205	ENST00000526124	DSCR9	P59020	149 aa		13.97	□□□□□ -0.17
LTBP3-205	ENST00000526124	TIMM50	Q3ZCQ8	353 aa		13.97	□□□□□ -0.17
LTBP3-205	ENST00000526124	HAGHL	Q6PII5	290 aa	Predicted RBP	13.97	□□□□□ -0.17
LTBP3-205	ENST00000526124	SATL1	Q86VE3	508 aa		13.97	□□□□□ -0.17
LTBP3-205	ENST00000526124	OR10Z1	Q8NGY1	313 aa		13.97	□□□□□ -0.17
LTBP3-205	ENST00000526124	PKIB	Q9C010	78 aa		13.97	□□□□□ -0.17
LTBP3-205	ENST00000526124	CHODL	Q9H9P2	273 aa		13.97	□□□□□ -0.17
LTBP3-205	ENST00000526124	CSMD2	Q7Z408	3487 aa		13.97	□□□□□ -0.17
LTBP3-205	ENST00000526124	LOC100506127	A0A0U1RQW1	187 aa		13.96	□□□□□ -0.17
LTBP3-205	ENST00000526124		J3QT63	122 aa		13.96	□□□□□ -0.17
LTBP3-205	ENST00000526124	AIRE	O43918	545 aa		13.96	□□□□□ -0.17
LTBP3-205	ENST00000526124	NOS1AP	O75052	506 aa	Predicted RBP	13.96	□□□□□ -0.17
LTBP3-205	ENST00000526124	RHBDL1	O75783	438 aa		13.96	□□□□□ -0.17
LTBP3-205	ENST00000526124	CYB5R3	P00387	301 aa	Predicted RBP	13.96	□□□□□ -0.17
LTBP3-205	ENST00000526124	MPZ	P25189	248 aa		13.96	□□□□□ -0.17
LTBP3-205	ENST00000526124	GIF	P27352	417 aa		13.96	□□□□□ -0.17
LTBP3-205	ENST00000526124	ZNF93	P35789	620 aa	Predicted RBP	13.96	□□□□□ -0.17
LTBP3-205	ENST00000526124	IL24	Q13007	206 aa		13.96	□□□□□ -0.17
LTBP3-205	ENST00000526124	PDZK1IP1	Q13113	114 aa		13.96	□□□□□ -0.17
LTBP3-205	ENST00000526124	HNRNPA0	Q13151	305 aa	Known RBP	13.96	□□□□□ -0.17
LTBP3-205	ENST00000526124	RIN1	Q13671	783 aa		13.96	□□□□□ -0.17
LTBP3-205	ENST00000526124	DDI2	Q5TDH0	399 aa		13.96	□□□□□ -0.17
LTBP3-205	ENST00000526124	LYPD6	Q86Y78	171 aa		13.96	□□□□□ -0.17
LTBP3-205	ENST00000526124	ANKRD13B	Q86YJ7	626 aa		13.96	□□□□□ -0.17
LTBP3-205	ENST00000526124	FAM168A	Q92567	244 aa		13.96	□□□□□ -0.17
LTBP3-205	ENST00000526124	HPS1	Q92902	700 aa		13.96	□□□□□ -0.17
LTBP3-205	ENST00000526124	RFT1	Q96AA3	541 aa		13.96	□□□□□ -0.17
LTBP3-205	ENST00000526124	CENPO	Q9BU64	300 aa		13.96	□□□□□ -0.17
LTBP3-205	ENST00000526124	DCAF16	Q9NXF7	216 aa		13.96	□□□□□ -0.17
LTBP3-205	ENST00000526124	MAP1A	P78559	2803 aa	Predicted RBP	13.95	□□□□□ -0.18
LTBP3-205	ENST00000526124	SHISA3	A0PJX4	238 aa		13.95	□□□□□ -0.18
LTBP3-205	ENST00000526124	SYNGR1	O43759	233 aa		13.95	□□□□□ -0.18
LTBP3-205	ENST00000526124	IRF2	P14316	349 aa		13.95	□□□□□ -0.18
LTBP3-205	ENST00000526124	ART1	P52961	327 aa		13.95	□□□□□ -0.18
LTBP3-205	ENST00000526124	CARTPT	Q16568	116 aa		13.95	□□□□□ -0.18
LTBP3-205	ENST00000526124	CLEC12B	Q2HXU8	276 aa		13.95	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms