RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 RNFT2Q96EX2 444 aa10.87□□□□□ -0.67
NKX3-1-202ENST00000523261 COPS4Q9BT78 406 aa10.87□□□□□ -0.67
NKX3-1-202ENST00000523261 KCNG2Q9UJ96 466 aa10.87□□□□□ -0.67
NKX3-1-202ENST00000523261 MPC1Q9Y5U8 109 aa10.87□□□□□ -0.67
NKX3-1-202ENST00000523261 DSCAML1Q8TD84 2053 aa10.87□□□□□ -0.67
NKX3-1-202ENST00000523261 KMT2AQ03164 3969 aa10.86□□□□□ -0.67
NKX3-1-202ENST00000523261 IGHV2-26A0A0B4J1V2 119 aa10.86□□□□□ -0.67
NKX3-1-202ENST00000523261 MEX3AA1L020 520 aaKnown RBP10.86□□□□□ -0.67
NKX3-1-202ENST00000523261 RFPL4AA6NLU0 287 aa10.86□□□□□ -0.67
NKX3-1-202ENST00000523261 RFPL4AL1F8VTS6 287 aa10.86□□□□□ -0.67
NKX3-1-202ENST00000523261 SLC1A7O00341 560 aa10.86□□□□□ -0.67
NKX3-1-202ENST00000523261 FFAR1O14842 300 aa10.86□□□□□ -0.67
NKX3-1-202ENST00000523261 SLC22A2O15244 555 aa10.86□□□□□ -0.67
NKX3-1-202ENST00000523261 TBX1O43435 398 aa10.86□□□□□ -0.67
NKX3-1-202ENST00000523261 HLA-DQA2P01906 255 aa10.86□□□□□ -0.67
NKX3-1-202ENST00000523261 PSKH1P11801 424 aa10.86□□□□□ -0.67
NKX3-1-202ENST00000523261 IFNA8P32881 189 aa10.86□□□□□ -0.67
NKX3-1-202ENST00000523261 YAP1P46937 504 aaKnown RBP10.86□□□□□ -0.67
NKX3-1-202ENST00000523261 RPS6KA3P51812 740 aa10.86□□□□□ -0.67
NKX3-1-202ENST00000523261 PRDX4Q13162 271 aa10.86□□□□□ -0.67
NKX3-1-202ENST00000523261 TIGD6Q17RP2 521 aa10.86□□□□□ -0.67
NKX3-1-202ENST00000523261 DPY19L2P2Q6ZN68 376 aa10.86□□□□□ -0.67
NKX3-1-202ENST00000523261 KCTD8Q6ZWB6 473 aa10.86□□□□□ -0.67
NKX3-1-202ENST00000523261 OR4P4Q8NGL7 312 aa10.86□□□□□ -0.67
NKX3-1-202ENST00000523261 OR4C15Q8NGM1 316 aa10.86□□□□□ -0.67
NKX3-1-202ENST00000523261 LZICQ8WZA0 190 aa10.86□□□□□ -0.67
NKX3-1-202ENST00000523261 RNF170Q96K19 258 aa10.86□□□□□ -0.67
NKX3-1-202ENST00000523261 NMNAT3Q96T66 252 aa10.86□□□□□ -0.67
NKX3-1-202ENST00000523261 KCNJ15Q99712 375 aa10.86□□□□□ -0.67
NKX3-1-202ENST00000523261 PAIP2Q9BPZ3 127 aaKnown RBP10.86□□□□□ -0.67
NKX3-1-202ENST00000523261 FNDC11Q9BVV2 318 aa10.86□□□□□ -0.67
NKX3-1-202ENST00000523261 RPRD1BQ9NQG5 326 aaKnown RBP10.86□□□□□ -0.67
NKX3-1-202ENST00000523261 LINC00527Q9UJ94 153 aa10.86□□□□□ -0.67
NKX3-1-202ENST00000523261 HHLA2Q9UM44 414 aa10.86□□□□□ -0.67
NKX3-1-202ENST00000523261 DNAH10Q8IVF4 4471 aa10.85□□□□□ -0.67
NKX3-1-202ENST00000523261 ZNF850A8MQ14 1090 aa10.85□□□□□ -0.67
NKX3-1-202ENST00000523261 J3KTA2 159 aa10.85□□□□□ -0.67
NKX3-1-202ENST00000523261 SLC25A17O43808 307 aa10.85□□□□□ -0.67
NKX3-1-202ENST00000523261 RPLP1P05386 114 aaKnown RBP10.85□□□□□ -0.67
NKX3-1-202ENST00000523261 HTR1DP28221 377 aa10.85□□□□□ -0.67
NKX3-1-202ENST00000523261 SLC35B1P78383 322 aa10.85□□□□□ -0.67
NKX3-1-202ENST00000523261 FHL3Q13643 280 aa10.85□□□□□ -0.67
NKX3-1-202ENST00000523261 SNAPC1Q16533 368 aa10.85□□□□□ -0.67
NKX3-1-202ENST00000523261 AGKQ53H12 422 aa10.85□□□□□ -0.67
NKX3-1-202ENST00000523261 ACP7Q6ZNF0 438 aa10.85□□□□□ -0.67
NKX3-1-202ENST00000523261 IL17DQ8TAD2 202 aa10.85□□□□□ -0.67
NKX3-1-202ENST00000523261 FAM46AQ96IP4 442 aaKnown RBP10.85□□□□□ -0.67
NKX3-1-202ENST00000523261 NSRP1Q9H0G5 558 aaKnown RBP10.85□□□□□ -0.67
NKX3-1-202ENST00000523261 SNX13Q9Y5W8 968 aa10.85□□□□□ -0.67
NKX3-1-202ENST00000523261 SIRT4Q9Y6E7 314 aaPredicted RBP10.85□□□□□ -0.67
NKX3-1-202ENST00000523261 SERPINE3A8MV23 424 aa10.84□□□□□ -0.67
NKX3-1-202ENST00000523261 CCRL2O00421 344 aa10.84□□□□□ -0.67
NKX3-1-202ENST00000523261 RENP00797 406 aa10.84□□□□□ -0.67
NKX3-1-202ENST00000523261 TK1P04183 234 aa10.84□□□□□ -0.67
NKX3-1-202ENST00000523261 SPNP16150 400 aa10.84□□□□□ -0.67
NKX3-1-202ENST00000523261 PRDX2P32119 198 aa10.84□□□□□ -0.67
NKX3-1-202ENST00000523261 CDX1P47902 265 aaPredicted RBP10.84□□□□□ -0.67
NKX3-1-202ENST00000523261 SNCBQ16143 134 aa10.84□□□□□ -0.67
NKX3-1-202ENST00000523261 EPGNQ6UW88 154 aa10.84□□□□□ -0.67
NKX3-1-202ENST00000523261 FTMTQ8N4E7 242 aa10.84□□□□□ -0.67
NKX3-1-202ENST00000523261 SPATA25Q9BR10 227 aa10.84□□□□□ -0.67
NKX3-1-202ENST00000523261 CLEC7AQ9BXN2 247 aa10.84□□□□□ -0.67
NKX3-1-202ENST00000523261 OR51I2Q9H344 312 aa10.84□□□□□ -0.67
NKX3-1-202ENST00000523261 FN3KQ9H479 309 aa10.84□□□□□ -0.67
NKX3-1-202ENST00000523261 ABCB9Q9NP78 766 aa10.84□□□□□ -0.67
NKX3-1-202ENST00000523261 DPM3Q9P2X0 92 aa10.84□□□□□ -0.67
NKX3-1-202ENST00000523261 TMEM5Q9Y2B1 443 aa10.84□□□□□ -0.67
NKX3-1-202ENST00000523261 MOB4Q9Y3A3 225 aa10.84□□□□□ -0.67
NKX3-1-202ENST00000523261 HSPE1-MOB4S4R3N1 261 aa10.84□□□□□ -0.67
NKX3-1-202ENST00000523261 OR6C68A6NDL8 312 aa10.83□□□□□ -0.68
NKX3-1-202ENST00000523261 GP9P14770 177 aa10.83□□□□□ -0.68
NKX3-1-202ENST00000523261 CFL1P23528 166 aaKnown RBP10.83□□□□□ -0.68
NKX3-1-202ENST00000523261 ACKR3P25106 362 aa10.83□□□□□ -0.68
NKX3-1-202ENST00000523261 GPM6AP51674 278 aa10.83□□□□□ -0.68
NKX3-1-202ENST00000523261 CYBRD1Q53TN4 286 aa10.83□□□□□ -0.68
NKX3-1-202ENST00000523261 TCF23Q7RTU1 214 aa10.83□□□□□ -0.68
NKX3-1-202ENST00000523261 PRSS45Q7RTY3 260 aa10.83□□□□□ -0.68
NKX3-1-202ENST00000523261 DCXRQ7Z4W1 244 aa10.83□□□□□ -0.68
NKX3-1-202ENST00000523261 DRAM1Q8N682 238 aa10.83□□□□□ -0.68
NKX3-1-202ENST00000523261 OR4K13Q8NH42 304 aa10.83□□□□□ -0.68
NKX3-1-202ENST00000523261 RSRC1Q96IZ7 334 aaKnown RBP10.83□□□□□ -0.68
NKX3-1-202ENST00000523261 ERMAPQ96PL5 475 aaPredicted RBP10.83□□□□□ -0.68
NKX3-1-202ENST00000523261 OR8B4Q96RC9 309 aa10.83□□□□□ -0.68
NKX3-1-202ENST00000523261 PAPOLBQ9NRJ5 636 aaKnown RBP10.83□□□□□ -0.68
NKX3-1-202ENST00000523261 CENPMQ9NSP4 180 aa10.83□□□□□ -0.68
NKX3-1-202ENST00000523261 RASL12Q9NYN1 266 aa10.83□□□□□ -0.68
NKX3-1-202ENST00000523261 ZNF319Q9P2F9 582 aa10.83□□□□□ -0.68
NKX3-1-202ENST00000523261 DNAJC8O75937 253 aaPredicted RBP10.82□□□□□ -0.68
NKX3-1-202ENST00000523261 LY6G6CO95867 125 aa10.82□□□□□ -0.68
NKX3-1-202ENST00000523261 CST4P01036 141 aa10.82□□□□□ -0.68
NKX3-1-202ENST00000523261 IFNA14P01570 189 aa10.82□□□□□ -0.68
NKX3-1-202ENST00000523261 ANXA2P07355 339 aaKnown RBP10.82□□□□□ -0.68
NKX3-1-202ENST00000523261 IGHV4-30-4P0DP06 118 aa10.82□□□□□ -0.68
NKX3-1-202ENST00000523261 SNRPBP14678 240 aaKnown RBP10.82□□□□□ -0.68
NKX3-1-202ENST00000523261 HIST1H1CP16403 213 aaKnown RBP10.82□□□□□ -0.68
NKX3-1-202ENST00000523261 CX3CR1P49238 355 aa10.82□□□□□ -0.68
NKX3-1-202ENST00000523261 EIF2B1Q14232 305 aaKnown RBP10.82□□□□□ -0.68
NKX3-1-202ENST00000523261 TAF13Q15543 124 aa10.82□□□□□ -0.68
NKX3-1-202ENST00000523261 GFOD2Q3B7J2 385 aa10.82□□□□□ -0.68
NKX3-1-202ENST00000523261 SMIM21Q3B7S5 101 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms