RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 HAUS4Q9H6D7 363 aa2.74□□□□□ -1.97
HMGB1P1-201ENST00000522557 WFDC1Q9HC57 220 aa2.74□□□□□ -1.97
HMGB1P1-201ENST00000522557 CSNK1G1Q9HCP0 422 aa2.74□□□□□ -1.97
HMGB1P1-201ENST00000522557 LZTFL1Q9NQ48 299 aa2.74□□□□□ -1.97
HMGB1P1-201ENST00000522557 ZNF223Q9UK11 482 aaPredicted RBP2.74□□□□□ -1.97
HMGB1P1-201ENST00000522557 DISP2A7MBM2 1401 aa2.74□□□□□ -1.97
HMGB1P1-201ENST00000522557 TNS3Q68CZ2 1445 aa2.74□□□□□ -1.97
HMGB1P1-201ENST00000522557 KIAA0232Q92628 1395 aa2.74□□□□□ -1.97
HMGB1P1-201ENST00000522557 TMEM131LA2VDJ0 1609 aa2.73□□□□□ -1.97
HMGB1P1-201ENST00000522557 DFFAO00273 331 aa2.73□□□□□ -1.97
HMGB1P1-201ENST00000522557 RFXANKO14593 260 aa2.73□□□□□ -1.97
HMGB1P1-201ENST00000522557 SPAG7O75391 227 aa2.73□□□□□ -1.97
HMGB1P1-201ENST00000522557 WISP3O95389 354 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P1-201ENST00000522557 TTC4O95801 387 aa2.73□□□□□ -1.97
HMGB1P1-201ENST00000522557 IGLV3-25P01717 112 aa2.73□□□□□ -1.97
HMGB1P1-201ENST00000522557 LINC00869P0C866 280 aa2.73□□□□□ -1.97
HMGB1P1-201ENST00000522557 ZNF32P17041 273 aa2.73□□□□□ -1.97
HMGB1P1-201ENST00000522557 HOXB8P17481 243 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P1-201ENST00000522557 P2RY2P41231 377 aa2.73□□□□□ -1.97
HMGB1P1-201ENST00000522557 CXCL12P48061 93 aa2.73□□□□□ -1.97
HMGB1P1-201ENST00000522557 KRTAP10-1P60331 282 aa2.73□□□□□ -1.97
HMGB1P1-201ENST00000522557 STK38Q15208 465 aa2.73□□□□□ -1.97
HMGB1P1-201ENST00000522557 LINC00303Q3SY05 128 aa2.73□□□□□ -1.97
HMGB1P1-201ENST00000522557 MPV17L2Q567V2 206 aa2.73□□□□□ -1.97
HMGB1P1-201ENST00000522557 ZNF684Q5T5D7 378 aa2.73□□□□□ -1.97
HMGB1P1-201ENST00000522557 EPGNQ6UW88 154 aa2.73□□□□□ -1.97
HMGB1P1-201ENST00000522557 IGFL3Q6UXB1 125 aa2.73□□□□□ -1.97
HMGB1P1-201ENST00000522557 UBALD2Q8IYN6 164 aa2.73□□□□□ -1.97
HMGB1P1-201ENST00000522557 OR4M1Q8NGD0 313 aa2.73□□□□□ -1.97
HMGB1P1-201ENST00000522557 OR10Z1Q8NGY1 313 aa2.73□□□□□ -1.97
HMGB1P1-201ENST00000522557 LRRC39Q96DD0 335 aa2.73□□□□□ -1.97
HMGB1P1-201ENST00000522557 RBMXL1Q96E39 390 aaKnown RBP2.73□□□□□ -1.97
HMGB1P1-201ENST00000522557 RBBP8Q99708 897 aa2.73□□□□□ -1.97
HMGB1P1-201ENST00000522557 GABRG3Q99928 467 aa2.73□□□□□ -1.97
HMGB1P1-201ENST00000522557 RAB1BQ9H0U4 201 aa2.73□□□□□ -1.97
HMGB1P1-201ENST00000522557 ARV1Q9H2C2 271 aa2.73□□□□□ -1.97
HMGB1P1-201ENST00000522557 SLC38A10Q9HBR0 1119 aa2.73□□□□□ -1.97
HMGB1P1-201ENST00000522557 RBMX2Q9Y388 322 aaKnown RBP2.73□□□□□ -1.97
HMGB1P1-201ENST00000522557 EIF3AQ14152 1382 aaKnown RBP2.73□□□□□ -1.97
HMGB1P1-201ENST00000522557 PXDNQ92626 1479 aa2.72□□□□□ -1.97
HMGB1P1-201ENST00000522557 DYSFO75923 2080 aa2.72□□□□□ -1.97
HMGB1P1-201ENST00000522557 C5orf63A6NC05 138 aa2.72□□□□□ -1.97
HMGB1P1-201ENST00000522557 PRMT5O14744 637 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P1-201ENST00000522557 UNC13BO14795 1591 aa2.72□□□□□ -1.97
HMGB1P1-201ENST00000522557 SERPINB7O75635 380 aa2.72□□□□□ -1.97
HMGB1P1-201ENST00000522557 CCNKO75909 580 aa2.72□□□□□ -1.97
HMGB1P1-201ENST00000522557 SMC2O95347 1197 aa2.72□□□□□ -1.97
HMGB1P1-201ENST00000522557 HLA-DQA1P01909 254 aa2.72□□□□□ -1.97
HMGB1P1-201ENST00000522557 NUP62P37198 522 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P1-201ENST00000522557 OPRK1P41145 380 aa2.72□□□□□ -1.97
HMGB1P1-201ENST00000522557 GPR4P46093 362 aa2.72□□□□□ -1.97
HMGB1P1-201ENST00000522557 TAS2R46P59540 309 aa2.72□□□□□ -1.97
HMGB1P1-201ENST00000522557 RPL31P62899 125 aaKnown RBP2.72□□□□□ -1.97
HMGB1P1-201ENST00000522557 WDR43Q15061 677 aaKnown RBP eCLIP2.72□□□□□ -1.97
HMGB1P1-201ENST00000522557 ATP6V1FQ16864 119 aa2.72□□□□□ -1.97
HMGB1P1-201ENST00000522557 FAM19A1Q7Z5A9 133 aa2.72□□□□□ -1.97
HMGB1P1-201ENST00000522557 DRAM1Q8N682 238 aa2.72□□□□□ -1.97
HMGB1P1-201ENST00000522557 SPANXA2-OT1Q8N9U9 137 aa2.72□□□□□ -1.97
HMGB1P1-201ENST00000522557 OR8K3Q8NH51 312 aa2.72□□□□□ -1.97
HMGB1P1-201ENST00000522557 OR1L1Q8NH94 360 aa2.72□□□□□ -1.97
HMGB1P1-201ENST00000522557 NDNFQ8TB73 568 aa2.72□□□□□ -1.97
HMGB1P1-201ENST00000522557 RXFP4Q8TDU9 374 aa2.72□□□□□ -1.97
HMGB1P1-201ENST00000522557 RXFP2Q8WXD0 754 aa2.72□□□□□ -1.97
HMGB1P1-201ENST00000522557 CENPNQ96H22 339 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P1-201ENST00000522557 OR4K3Q96R72 315 aa2.72□□□□□ -1.97
HMGB1P1-201ENST00000522557 RNF5Q99942 180 aa2.72□□□□□ -1.97
HMGB1P1-201ENST00000522557 ZNF649Q9BS31 505 aa2.72□□□□□ -1.97
HMGB1P1-201ENST00000522557 NDFIP1Q9BT67 221 aa2.72□□□□□ -1.97
HMGB1P1-201ENST00000522557 EMC6Q9BV81 110 aa2.72□□□□□ -1.97
HMGB1P1-201ENST00000522557 TFR2Q9UP52 801 aa2.72□□□□□ -1.97
HMGB1P1-201ENST00000522557 HYOU1Q9Y4L1 999 aa2.72□□□□□ -1.97
HMGB1P1-201ENST00000522557 LRP5O75197 1615 aa2.71□□□□□ -1.97
HMGB1P1-201ENST00000522557 PTPN23Q9H3S7 1636 aa2.71□□□□□ -1.97
HMGB1P1-201ENST00000522557 GLI3P10071 1580 aa2.71□□□□□ -1.98
HMGB1P1-201ENST00000522557 YTHDC2Q9H6S0 1430 aaKnown RBP2.71□□□□□ -1.98
HMGB1P1-201ENST00000522557 RRBP1Q9P2E9 1410 aaKnown RBP2.71□□□□□ -1.98
HMGB1P1-201ENST00000522557 IGKV6-21A0A0C4DH24 114 aa2.71□□□□□ -1.98
HMGB1P1-201ENST00000522557 A0A1W2PP18 115 aa2.71□□□□□ -1.98
HMGB1P1-201ENST00000522557 ANKRD20A5PA0PJZ0 165 aa2.71□□□□□ -1.98
HMGB1P1-201ENST00000522557 LRCOL1A6NCL2 159 aa2.71□□□□□ -1.98
HMGB1P1-201ENST00000522557 K7EN84 100 aa2.71□□□□□ -1.98
HMGB1P1-201ENST00000522557 PSMD11O00231 422 aa2.71□□□□□ -1.98
HMGB1P1-201ENST00000522557 RRP8O43159 456 aaKnown RBP2.71□□□□□ -1.98
HMGB1P1-201ENST00000522557 RBFOX2O43251 390 aaKnown RBP eCLIP2.71□□□□□ -1.98
HMGB1P1-201ENST00000522557 CCNE2O96020 404 aa2.71□□□□□ -1.98
HMGB1P1-201ENST00000522557 TAS2R31P59538 309 aa2.71□□□□□ -1.98
HMGB1P1-201ENST00000522557 PFN3P60673 137 aa2.71□□□□□ -1.98
HMGB1P1-201ENST00000522557 INCA1Q0VD86 236 aa2.71□□□□□ -1.98
HMGB1P1-201ENST00000522557 DYNC1I2Q13409 638 aaKnown RBP2.71□□□□□ -1.98
HMGB1P1-201ENST00000522557 TMED1Q13445 227 aa2.71□□□□□ -1.98
HMGB1P1-201ENST00000522557 EIF4EBP1Q13541 118 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P1-201ENST00000522557 TAL2Q16559 108 aa2.71□□□□□ -1.98
HMGB1P1-201ENST00000522557 C6orf99Q4VX62 202 aa2.71□□□□□ -1.98
HMGB1P1-201ENST00000522557 C5orf47Q569G3 176 aa2.71□□□□□ -1.98
HMGB1P1-201ENST00000522557 LCE1CQ5T751 118 aa2.71□□□□□ -1.98
HMGB1P1-201ENST00000522557 LCE1BQ5T7P3 118 aa2.71□□□□□ -1.98
HMGB1P1-201ENST00000522557 SETD3Q86TU7 594 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P1-201ENST00000522557 SLC30A8Q8IWU4 369 aa2.71□□□□□ -1.98
HMGB1P1-201ENST00000522557 OR6K6Q8NGW6 343 aa2.71□□□□□ -1.98
HMGB1P1-201ENST00000522557 OR51A7Q8NH64 312 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms