RNA–Protein interactions for RNA: ENST00000522504.5

TRAPPC9-213, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-213ENST00000522504 Q6ZS46 218 aa12.35□□□□□ -0.43
TRAPPC9-213ENST00000522504 Q8N2B8 174 aa12.35□□□□□ -0.43
TRAPPC9-213ENST00000522504 FTMTQ8N4E7 242 aa12.35□□□□□ -0.43
TRAPPC9-213ENST00000522504 CITED2Q99967 270 aaPredicted RBP12.35□□□□□ -0.43
TRAPPC9-213ENST00000522504 ELAC2Q9BQ52 826 aaKnown RBP12.35□□□□□ -0.43
TRAPPC9-213ENST00000522504 RAB18Q9NP72 206 aa12.35□□□□□ -0.43
TRAPPC9-213ENST00000522504 CMC2Q9NRP2 79 aa12.35□□□□□ -0.43
TRAPPC9-213ENST00000522504 BAIAP2Q9UQB8 552 aa12.35□□□□□ -0.43
TRAPPC9-213ENST00000522504 ZNF732B4DXR9 585 aa12.34□□□□□ -0.43
TRAPPC9-213ENST00000522504 MTRF1O75570 445 aaKnown RBP12.34□□□□□ -0.43
TRAPPC9-213ENST00000522504 GLCEO94923 617 aa12.34□□□□□ -0.43
TRAPPC9-213ENST00000522504 IFNGP01579 166 aa12.34□□□□□ -0.43
TRAPPC9-213ENST00000522504 CCL3L1P16619 93 aa12.34□□□□□ -0.43
TRAPPC9-213ENST00000522504 ATP6V1B2P21281 511 aa12.34□□□□□ -0.43
TRAPPC9-213ENST00000522504 MAGEA2P43356 314 aa12.34□□□□□ -0.43
TRAPPC9-213ENST00000522504 BLVRAP53004 296 aa12.34□□□□□ -0.43
TRAPPC9-213ENST00000522504 SNCBQ16143 134 aa12.34□□□□□ -0.43
TRAPPC9-213ENST00000522504 SAMD4BQ5PRF9 694 aaKnown RBP12.34□□□□□ -0.43
TRAPPC9-213ENST00000522504 CYP2R1Q6VVX0 501 aa12.34□□□□□ -0.43
TRAPPC9-213ENST00000522504 KRT74Q7RTS7 529 aa12.34□□□□□ -0.43
TRAPPC9-213ENST00000522504 TMEM219Q86XT9 240 aa12.34□□□□□ -0.43
TRAPPC9-213ENST00000522504 OR4M1Q8NGD0 313 aa12.34□□□□□ -0.43
TRAPPC9-213ENST00000522504 OR5K1Q8NHB7 308 aa12.34□□□□□ -0.43
TRAPPC9-213ENST00000522504 AQP3Q92482 292 aa12.34□□□□□ -0.43
TRAPPC9-213ENST00000522504 OTULINQ96BN8 352 aa12.34□□□□□ -0.43
TRAPPC9-213ENST00000522504 R3HDM4Q96D70 268 aa12.34□□□□□ -0.43
TRAPPC9-213ENST00000522504 ZNF488Q96MN9 340 aa12.34□□□□□ -0.43
TRAPPC9-213ENST00000522504 ABCB9Q9NP78 766 aa12.34□□□□□ -0.43
TRAPPC9-213ENST00000522504 U3KQV3 271 aa12.34□□□□□ -0.43
TRAPPC9-213ENST00000522504 FAM90A8PA6NJQ4 464 aa12.33□□□□□ -0.44
TRAPPC9-213ENST00000522504 RFPL4AA6NLU0 287 aa12.33□□□□□ -0.44
TRAPPC9-213ENST00000522504 RFPL4AL1F8VTS6 287 aa12.33□□□□□ -0.44
TRAPPC9-213ENST00000522504 XPNPEP2O43895 674 aa12.33□□□□□ -0.44
TRAPPC9-213ENST00000522504 ZNF3P17036 446 aa12.33□□□□□ -0.44
TRAPPC9-213ENST00000522504 CEBPDP49716 269 aaPredicted RBP12.33□□□□□ -0.44
TRAPPC9-213ENST00000522504 CAPZA1P52907 286 aa12.33□□□□□ -0.44
TRAPPC9-213ENST00000522504 RPL31P62899 125 aaKnown RBP12.33□□□□□ -0.44
TRAPPC9-213ENST00000522504 GNG3P63215 75 aa12.33□□□□□ -0.44
TRAPPC9-213ENST00000522504 CBX1P83916 185 aa12.33□□□□□ -0.44
TRAPPC9-213ENST00000522504 ZNF273Q14593 569 aa12.33□□□□□ -0.44
TRAPPC9-213ENST00000522504 FOXB2Q5VYV0 432 aa12.33□□□□□ -0.44
TRAPPC9-213ENST00000522504 ZNF782Q6ZMW2 699 aaPredicted RBP12.33□□□□□ -0.44
TRAPPC9-213ENST00000522504 LIAT1Q6ZQX7 453 aa12.33□□□□□ -0.44
TRAPPC9-213ENST00000522504 SHFQ7M4L6 423 aa12.33□□□□□ -0.44
TRAPPC9-213ENST00000522504 THAP5Q7Z6K1 395 aa12.33□□□□□ -0.44
TRAPPC9-213ENST00000522504 NDUFA11Q86Y39 141 aa12.33□□□□□ -0.44
TRAPPC9-213ENST00000522504 PGAM4Q8N0Y7 254 aa12.33□□□□□ -0.44
TRAPPC9-213ENST00000522504 OR4S1Q8NGB4 309 aa12.33□□□□□ -0.44
TRAPPC9-213ENST00000522504 OTOSQ8NHW6 89 aa12.33□□□□□ -0.44
TRAPPC9-213ENST00000522504 THEM6Q8WUY1 208 aa12.33□□□□□ -0.44
TRAPPC9-213ENST00000522504 OR5M11Q96RB7 305 aa12.33□□□□□ -0.44
TRAPPC9-213ENST00000522504 NIPSNAP1Q9BPW8 284 aa12.33□□□□□ -0.44
TRAPPC9-213ENST00000522504 DGCR6LQ9BY27 220 aa12.33□□□□□ -0.44
TRAPPC9-213ENST00000522504 OR51V1Q9H2C8 321 aa12.33□□□□□ -0.44
TRAPPC9-213ENST00000522504 HEXA-AS1Q9H8Q6 139 aa12.33□□□□□ -0.44
TRAPPC9-213ENST00000522504 A6NDX4 124 aa12.32□□□□□ -0.44
TRAPPC9-213ENST00000522504 VGLL3A8MV65 326 aa12.32□□□□□ -0.44
TRAPPC9-213ENST00000522504 FAM107AO95990 144 aa12.32□□□□□ -0.44
TRAPPC9-213ENST00000522504 LYNP07948 512 aa12.32□□□□□ -0.44
TRAPPC9-213ENST00000522504 JUNBP17275 347 aaPredicted RBP12.32□□□□□ -0.44
TRAPPC9-213ENST00000522504 HCCSP53701 268 aa12.32□□□□□ -0.44
TRAPPC9-213ENST00000522504 PSMA6P60900 246 aaKnown RBP12.32□□□□□ -0.44
TRAPPC9-213ENST00000522504 EMX1Q04741 257 aaPredicted RBP12.32□□□□□ -0.44
TRAPPC9-213ENST00000522504 MICAQ29983 383 aa12.32□□□□□ -0.44
TRAPPC9-213ENST00000522504 CEACAM21Q3KPI0 293 aa12.32□□□□□ -0.44
TRAPPC9-213ENST00000522504 HAGHLQ6PII5 290 aaPredicted RBP12.32□□□□□ -0.44
TRAPPC9-213ENST00000522504 ACP7Q6ZNF0 438 aa12.32□□□□□ -0.44
TRAPPC9-213ENST00000522504 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.32□□□□□ -0.44
TRAPPC9-213ENST00000522504 HIST1H2AAQ96QV6 131 aa12.32□□□□□ -0.44
TRAPPC9-213ENST00000522504 CDCA4Q9BXL8 241 aa12.32□□□□□ -0.44
TRAPPC9-213ENST00000522504 WNT10AQ9GZT5 417 aa12.32□□□□□ -0.44
TRAPPC9-213ENST00000522504 TCF19Q9Y242 345 aa12.32□□□□□ -0.44
TRAPPC9-213ENST00000522504 TCRBV5S2A0A599 114 aa12.31□□□□□ -0.44
TRAPPC9-213ENST00000522504 MEX3AA1L020 520 aaKnown RBP12.31□□□□□ -0.44
TRAPPC9-213ENST00000522504 SNX3O60493 162 aa12.31□□□□□ -0.44
TRAPPC9-213ENST00000522504 IGLL1P15814 213 aa12.31□□□□□ -0.44
TRAPPC9-213ENST00000522504 PRDX2P32119 198 aa12.31□□□□□ -0.44
TRAPPC9-213ENST00000522504 DLX6P56179 175 aa12.31□□□□□ -0.44
TRAPPC9-213ENST00000522504 TMEM95Q3KNT9 176 aa12.31□□□□□ -0.44
TRAPPC9-213ENST00000522504 PLBD1Q6P4A8 553 aa12.31□□□□□ -0.44
TRAPPC9-213ENST00000522504 TRPM8Q7Z2W7 1104 aa12.31□□□□□ -0.44
TRAPPC9-213ENST00000522504 BATF2Q8N1L9 274 aa12.31□□□□□ -0.44
TRAPPC9-213ENST00000522504 PAPD5Q8NDF8 572 aaKnown RBP12.31□□□□□ -0.44
TRAPPC9-213ENST00000522504 SAMHD1Q9Y3Z3 626 aaKnown RBP12.31□□□□□ -0.44
TRAPPC9-213ENST00000522504 LRP12Q9Y561 859 aa12.31□□□□□ -0.44
TRAPPC9-213ENST00000522504 PRR32B1ATL7 298 aa12.3□□□□□ -0.44
TRAPPC9-213ENST00000522504 K7EIL1 84 aa12.3□□□□□ -0.44
TRAPPC9-213ENST00000522504 SYNGR1O43759 233 aa12.3□□□□□ -0.44
TRAPPC9-213ENST00000522504 MPIG6BO95866 241 aa12.3□□□□□ -0.44
TRAPPC9-213ENST00000522504 LGALS4P56470 323 aa12.3□□□□□ -0.44
TRAPPC9-213ENST00000522504 BLCAPP62952 87 aa12.3□□□□□ -0.44
TRAPPC9-213ENST00000522504 CNN3Q15417 329 aaKnown RBP12.3□□□□□ -0.44
TRAPPC9-213ENST00000522504 C11orf87Q6NUJ2 197 aa12.3□□□□□ -0.44
TRAPPC9-213ENST00000522504 CD300LDQ6UXZ3 194 aa12.3□□□□□ -0.44
TRAPPC9-213ENST00000522504 MOB3CQ70IA8 216 aa12.3□□□□□ -0.44
TRAPPC9-213ENST00000522504 PIGWQ7Z7B1 504 aa12.3□□□□□ -0.44
TRAPPC9-213ENST00000522504 ZNF454Q8N9F8 522 aa12.3□□□□□ -0.44
TRAPPC9-213ENST00000522504 POC1AQ8NBT0 407 aa12.3□□□□□ -0.44
TRAPPC9-213ENST00000522504 BBS1Q8NFJ9 593 aa12.3□□□□□ -0.44
TRAPPC9-213ENST00000522504 OR4F17Q8NGA8 305 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms