RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 NUFIP1Q9UHK0 495 aaKnown RBP17.02■□□□□ 0.32
SDCBP-209ENST00000522243 AP4S1Q9Y587 144 aa17.02■□□□□ 0.32
SDCBP-209ENST00000522243 SLC22A31A6NKX4 558 aa17.01■□□□□ 0.31
SDCBP-209ENST00000522243 ZNF670-ZNF695F2Z2N8 137 aa17.01■□□□□ 0.31
SDCBP-209ENST00000522243 LOC110117498-PIK3R3F6TDL0 507 aa17.01■□□□□ 0.31
SDCBP-209ENST00000522243 SIGLEC5O15389 551 aa17.01■□□□□ 0.31
SDCBP-209ENST00000522243 SRSF10O75494 262 aaKnown RBP17.01■□□□□ 0.31
SDCBP-209ENST00000522243 ACAA1P09110 424 aaPredicted RBP17.01■□□□□ 0.31
SDCBP-209ENST00000522243 ATP6V1B1P15313 513 aa17.01■□□□□ 0.31
SDCBP-209ENST00000522243 FASP25445 335 aa17.01■□□□□ 0.31
SDCBP-209ENST00000522243 RAG2P55895 527 aa17.01■□□□□ 0.31
SDCBP-209ENST00000522243 SRSF4Q08170 494 aaKnown RBP17.01■□□□□ 0.31
SDCBP-209ENST00000522243 PRR31Q5SQ13 230 aa17.01■□□□□ 0.31
SDCBP-209ENST00000522243 C1orf146Q5VVC0 180 aa17.01■□□□□ 0.31
SDCBP-209ENST00000522243 KDM4DQ6B0I6 523 aa17.01■□□□□ 0.31
SDCBP-209ENST00000522243 KRT74Q7RTS7 529 aa17.01■□□□□ 0.31
SDCBP-209ENST00000522243 OR5A2Q8NGI9 324 aa17.01■□□□□ 0.31
SDCBP-209ENST00000522243 C8orf46Q8TAG6 207 aa17.01■□□□□ 0.31
SDCBP-209ENST00000522243 ZNF671Q8TAW3 534 aa17.01■□□□□ 0.31
SDCBP-209ENST00000522243 SSMEM1Q8WWF3 244 aa17.01■□□□□ 0.31
SDCBP-209ENST00000522243 LRTOMTQ8WZ04 291 aa17.01■□□□□ 0.31
SDCBP-209ENST00000522243 ZNF696Q9H7X3 374 aa17.01■□□□□ 0.31
SDCBP-209ENST00000522243 ENPP5Q9UJA9 477 aa17.01■□□□□ 0.31
SDCBP-209ENST00000522243 POMT1Q9Y6A1 747 aa17.01■□□□□ 0.31
SDCBP-209ENST00000522243 NBEAL1Q6ZS30 2694 aa17■□□□□ 0.31
SDCBP-209ENST00000522243 IGKV1D-17A0A075B6S4 117 aa17■□□□□ 0.31
SDCBP-209ENST00000522243 A6NIN4 97 aa17■□□□□ 0.31
SDCBP-209ENST00000522243 OR5B21A6NL26 309 aa17■□□□□ 0.31
SDCBP-209ENST00000522243 RNASEK-C17orf49H0YIS7 233 aa17■□□□□ 0.31
SDCBP-209ENST00000522243 DHRS3O75911 302 aa17■□□□□ 0.31
SDCBP-209ENST00000522243 NRASP01111 189 aa17■□□□□ 0.31
SDCBP-209ENST00000522243 PSG2P11465 335 aa17■□□□□ 0.31
SDCBP-209ENST00000522243 ZDHHC13Q8IUH4 622 aa17■□□□□ 0.31
SDCBP-209ENST00000522243 PNKDQ8N490 385 aa17■□□□□ 0.31
SDCBP-209ENST00000522243 ZNRF1Q8ND25 227 aa17■□□□□ 0.31
SDCBP-209ENST00000522243 TMEM185AQ8NFB2 350 aa17■□□□□ 0.31
SDCBP-209ENST00000522243 OR4F5Q8NH21 305 aa17■□□□□ 0.31
SDCBP-209ENST00000522243 AQP3Q92482 292 aa17■□□□□ 0.31
SDCBP-209ENST00000522243 ZNF488Q96MN9 340 aa17■□□□□ 0.31
SDCBP-209ENST00000522243 TBX5Q99593 518 aa17■□□□□ 0.31
SDCBP-209ENST00000522243 GABARAPL1Q9H0R8 117 aa17■□□□□ 0.31
SDCBP-209ENST00000522243 SLITRK2Q9H156 845 aa17■□□□□ 0.31
SDCBP-209ENST00000522243 GPR173Q9NS66 373 aa17■□□□□ 0.31
SDCBP-209ENST00000522243 OR52A1Q9UKL2 312 aa17■□□□□ 0.31
SDCBP-209ENST00000522243 FAM96BQ9Y3D0 163 aa17■□□□□ 0.31
SDCBP-209ENST00000522243 MAB21L2Q9Y586 359 aa17■□□□□ 0.31
SDCBP-209ENST00000522243 MMP24Q9Y5R2 645 aa17■□□□□ 0.31
SDCBP-209ENST00000522243 R4GMQ9 66 aa17■□□□□ 0.31
SDCBP-209ENST00000522243 A0A1W2PQ09 198 aa16.99■□□□□ 0.31
SDCBP-209ENST00000522243 MTRF1O75570 445 aaKnown RBP16.99■□□□□ 0.31
SDCBP-209ENST00000522243 KNG1P01042 644 aa16.99■□□□□ 0.31
SDCBP-209ENST00000522243 POLR2IP36954 125 aaKnown RBP16.99■□□□□ 0.31
SDCBP-209ENST00000522243 IER3P46695 156 aa16.99■□□□□ 0.31
SDCBP-209ENST00000522243 RASSF2P50749 326 aa16.99■□□□□ 0.31
SDCBP-209ENST00000522243 BCL2L15Q5TBC7 163 aa16.99■□□□□ 0.31
SDCBP-209ENST00000522243 SSX6Q7RTT6 188 aa16.99■□□□□ 0.31
SDCBP-209ENST00000522243 LDLRAD3Q86YD5 345 aa16.99■□□□□ 0.31
SDCBP-209ENST00000522243 OR51G2Q8NGK0 314 aa16.99■□□□□ 0.31
SDCBP-209ENST00000522243 DMRTB1Q96MA1 342 aa16.99■□□□□ 0.31
SDCBP-209ENST00000522243 BEX1Q9HBH7 125 aa16.99■□□□□ 0.31
SDCBP-209ENST00000522243 CLN6Q9NWW5 311 aa16.99■□□□□ 0.31
SDCBP-209ENST00000522243 MRM2Q9UI43 246 aaKnown RBP16.99■□□□□ 0.31
SDCBP-209ENST00000522243 SLC22A13Q9Y226 551 aa16.99■□□□□ 0.31
SDCBP-209ENST00000522243 SYNGR1O43759 233 aa16.98■□□□□ 0.31
SDCBP-209ENST00000522243 GPR137BO60478 399 aa16.98■□□□□ 0.31
SDCBP-209ENST00000522243 RPP14O95059 124 aaKnown RBP16.98■□□□□ 0.31
SDCBP-209ENST00000522243 APOL3O95236 402 aa16.98■□□□□ 0.31
SDCBP-209ENST00000522243 CAV3P56539 151 aa16.98■□□□□ 0.31
SDCBP-209ENST00000522243 ACTR3P61158 418 aa16.98■□□□□ 0.31
SDCBP-209ENST00000522243 ZNF684Q5T5D7 378 aa16.98■□□□□ 0.31
SDCBP-209ENST00000522243 ZBTB37Q5TC79 503 aa16.98■□□□□ 0.31
SDCBP-209ENST00000522243 METAP1DQ6UB28 335 aaPredicted RBP16.98■□□□□ 0.31
SDCBP-209ENST00000522243 GID4Q8IVV7 300 aa16.98■□□□□ 0.31
SDCBP-209ENST00000522243 ELMOD2Q8IZ81 293 aa16.98■□□□□ 0.31
SDCBP-209ENST00000522243 BATF2Q8N1L9 274 aa16.98■□□□□ 0.31
SDCBP-209ENST00000522243 OR14K1Q8NGZ2 314 aa16.98■□□□□ 0.31
SDCBP-209ENST00000522243 DYRK2Q92630 601 aa16.98■□□□□ 0.31
SDCBP-209ENST00000522243 ITFG2Q969R8 447 aa16.98■□□□□ 0.31
SDCBP-209ENST00000522243 DUS3LQ96G46 650 aaKnown RBP16.98■□□□□ 0.31
SDCBP-209ENST00000522243 MNTQ99583 582 aa16.98■□□□□ 0.31
SDCBP-209ENST00000522243 CIB1Q99828 191 aa16.98■□□□□ 0.31
SDCBP-209ENST00000522243 ZNF222Q9UK12 451 aa16.98■□□□□ 0.31
SDCBP-209ENST00000522243 A0A1B0GTI1 187 aa16.97■□□□□ 0.31
SDCBP-209ENST00000522243 A0A1B0GUS0 222 aa16.97■□□□□ 0.31
SDCBP-209ENST00000522243 H3BSH0 61 aa16.97■□□□□ 0.31
SDCBP-209ENST00000522243 NPFFO15130 113 aa16.97■□□□□ 0.31
SDCBP-209ENST00000522243 EEF1B2P24534 225 aaKnown RBP16.97■□□□□ 0.31
SDCBP-209ENST00000522243 HAAOP46952 286 aa16.97■□□□□ 0.31
SDCBP-209ENST00000522243 CAPZA1P52907 286 aa16.97■□□□□ 0.31
SDCBP-209ENST00000522243 GUCA2AQ02747 115 aa16.97■□□□□ 0.31
SDCBP-209ENST00000522243 EGR3Q06889 387 aa16.97■□□□□ 0.31
SDCBP-209ENST00000522243 ODF4Q2M2E3 257 aa16.97■□□□□ 0.31
SDCBP-209ENST00000522243 OLFML2AQ68BL7 652 aa16.97■□□□□ 0.31
SDCBP-209ENST00000522243 ACP7Q6ZNF0 438 aa16.97■□□□□ 0.31
SDCBP-209ENST00000522243 FAM185AQ8N0U4 392 aa16.97■□□□□ 0.31
SDCBP-209ENST00000522243 TNFRSF14Q92956 283 aa16.97■□□□□ 0.31
SDCBP-209ENST00000522243 RIBC2Q9H4K1 309 aa16.97■□□□□ 0.31
SDCBP-209ENST00000522243 MOB1AQ9H8S9 216 aa16.97■□□□□ 0.31
SDCBP-209ENST00000522243 SNX5Q9Y5X3 404 aa16.97■□□□□ 0.31
SDCBP-209ENST00000522243 V9GYS6 101 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 165.1 ms