RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 ZNF154Q13106 437 aa11.36□□□□□ -0.59
CLK4-210ENST00000522136 MPPED2Q15777 294 aa11.36□□□□□ -0.59
CLK4-210ENST00000522136 FAM166AQ6J272 317 aa11.36□□□□□ -0.59
CLK4-210ENST00000522136 BATF2Q8N1L9 274 aa11.36□□□□□ -0.59
CLK4-210ENST00000522136 ZNF611Q8N823 705 aa11.36□□□□□ -0.59
CLK4-210ENST00000522136 SLC25A28Q96A46 364 aa11.36□□□□□ -0.59
CLK4-210ENST00000522136 SORCS2Q96PQ0 1159 aa11.36□□□□□ -0.59
CLK4-210ENST00000522136 OR51I2Q9H344 312 aa11.36□□□□□ -0.59
CLK4-210ENST00000522136 NEK6Q9HC98 313 aa11.36□□□□□ -0.59
CLK4-210ENST00000522136 ABCB9Q9NP78 766 aa11.36□□□□□ -0.59
CLK4-210ENST00000522136 CCDC59Q9P031 241 aaKnown RBP11.36□□□□□ -0.59
CLK4-210ENST00000522136 LAMP3Q9UQV4 416 aa11.36□□□□□ -0.59
CLK4-210ENST00000522136 LRBAP50851 2863 aa11.35□□□□□ -0.59
CLK4-210ENST00000522136 GCN1Q92616 2671 aaKnown RBP11.35□□□□□ -0.59
CLK4-210ENST00000522136 TMEM225BP0DP42 221 aa11.35□□□□□ -0.59
CLK4-210ENST00000522136 HTR2CP28335 458 aa11.35□□□□□ -0.59
CLK4-210ENST00000522136 SOX6P35712 828 aa11.35□□□□□ -0.59
CLK4-210ENST00000522136 PTGFRP43088 359 aa11.35□□□□□ -0.59
CLK4-210ENST00000522136 CCL8P80075 99 aa11.35□□□□□ -0.59
CLK4-210ENST00000522136 TNFAIP6P98066 277 aaPredicted RBP11.35□□□□□ -0.59
CLK4-210ENST00000522136 TLE4Q04727 773 aa11.35□□□□□ -0.59
CLK4-210ENST00000522136 RAB11BQ15907 218 aa11.35□□□□□ -0.59
CLK4-210ENST00000522136 DGUOKQ16854 277 aa11.35□□□□□ -0.59
CLK4-210ENST00000522136 C11orf71Q6IPW1 123 aa11.35□□□□□ -0.59
CLK4-210ENST00000522136 HAGHLQ6PII5 290 aaPredicted RBP11.35□□□□□ -0.59
CLK4-210ENST00000522136 ZNF826PQ6ZT77 177 aa11.35□□□□□ -0.59
CLK4-210ENST00000522136 TMEM200AQ86VY9 491 aa11.35□□□□□ -0.59
CLK4-210ENST00000522136 OR51D1Q8NGF3 324 aa11.35□□□□□ -0.59
CLK4-210ENST00000522136 TNFAIP8L1Q8WVP5 186 aa11.35□□□□□ -0.59
CLK4-210ENST00000522136 ITLN1Q8WWA0 313 aa11.35□□□□□ -0.59
CLK4-210ENST00000522136 FOXRED1Q96CU9 486 aaPredicted RBP11.35□□□□□ -0.59
CLK4-210ENST00000522136 MEGF10Q96KG7 1140 aa11.35□□□□□ -0.59
CLK4-210ENST00000522136 OR2V2Q96R30 315 aa11.35□□□□□ -0.59
CLK4-210ENST00000522136 UQCC2Q9BRT2 126 aa11.35□□□□□ -0.59
CLK4-210ENST00000522136 PLEKHF2Q9H8W4 249 aa11.35□□□□□ -0.59
CLK4-210ENST00000522136 LIN7BQ9HAP6 207 aa11.35□□□□□ -0.59
CLK4-210ENST00000522136 CBLN4Q9NTU7 201 aa11.35□□□□□ -0.59
CLK4-210ENST00000522136 UFSP2Q9NUQ7 469 aa11.35□□□□□ -0.59
CLK4-210ENST00000522136 STEAP1Q9UHE8 339 aa11.35□□□□□ -0.59
CLK4-210ENST00000522136 ZDHHC8Q9ULC8 765 aa11.35□□□□□ -0.59
CLK4-210ENST00000522136 MRPS28Q9Y2Q9 187 aaKnown RBP11.35□□□□□ -0.59
CLK4-210ENST00000522136 DCHS2Q6V1P9 2916 aa11.35□□□□□ -0.59
CLK4-210ENST00000522136 SYNGR1O43759 233 aa11.34□□□□□ -0.59
CLK4-210ENST00000522136 RHBDL1O75783 438 aa11.34□□□□□ -0.59
CLK4-210ENST00000522136 SNRPD2P62316 118 aaKnown RBP11.34□□□□□ -0.59
CLK4-210ENST00000522136 PDZK1IP1Q13113 114 aa11.34□□□□□ -0.59
CLK4-210ENST00000522136 FAM76BQ5HYJ3 339 aa11.34□□□□□ -0.59
CLK4-210ENST00000522136 AGAP6Q5VW22 663 aa11.34□□□□□ -0.59
CLK4-210ENST00000522136 SLC25A26Q70HW3 274 aa11.34□□□□□ -0.59
CLK4-210ENST00000522136 CDH26Q8IXH8 852 aa11.34□□□□□ -0.59
CLK4-210ENST00000522136 C11orf53Q8IXP5 236 aa11.34□□□□□ -0.59
CLK4-210ENST00000522136 SPERTQ8NA61 448 aa11.34□□□□□ -0.59
CLK4-210ENST00000522136 SCCPDHQ8NBX0 429 aa11.34□□□□□ -0.59
CLK4-210ENST00000522136 OR6M1Q8NGM8 313 aa11.34□□□□□ -0.59
CLK4-210ENST00000522136 VRK1Q99986 396 aaPredicted RBP11.34□□□□□ -0.59
CLK4-210ENST00000522136 C14orf119Q9NWQ9 140 aa11.34□□□□□ -0.59
CLK4-210ENST00000522136 NKIRAS2Q9NYR9 191 aa11.34□□□□□ -0.59
CLK4-210ENST00000522136 ING4Q9UNL4 249 aa11.34□□□□□ -0.59
CLK4-210ENST00000522136 NOP16Q9Y3C1 178 aaKnown RBP11.34□□□□□ -0.59
CLK4-210ENST00000522136 IGKV1-12A0A0C4DH73 117 aa11.34□□□□□ -0.59
CLK4-210ENST00000522136 LRP5LA4QPB2 252 aa11.34□□□□□ -0.59
CLK4-210ENST00000522136 IGKV1D-12P01611 117 aa11.34□□□□□ -0.59
CLK4-210ENST00000522136 CD200P41217 278 aa11.34□□□□□ -0.59
CLK4-210ENST00000522136 HOXA4Q00056 320 aaPredicted RBP11.34□□□□□ -0.59
CLK4-210ENST00000522136 PLA2G7Q13093 441 aa11.34□□□□□ -0.59
CLK4-210ENST00000522136 AWAT2Q6E213 333 aa11.34□□□□□ -0.59
CLK4-210ENST00000522136 OR10K2Q6IF99 312 aa11.34□□□□□ -0.59
CLK4-210ENST00000522136 GLIPR1L1Q6UWM5 242 aa11.34□□□□□ -0.59
CLK4-210ENST00000522136 DTX2Q86UW9 622 aa11.34□□□□□ -0.59
CLK4-210ENST00000522136 ZNF573Q86YE8 665 aa11.34□□□□□ -0.59
CLK4-210ENST00000522136 PNLDC1Q8NA58 520 aaKnown RBP11.34□□□□□ -0.59
CLK4-210ENST00000522136 OR5H6Q8NGV6 325 aa11.34□□□□□ -0.59
CLK4-210ENST00000522136 OR10K1Q8NGX5 313 aa11.34□□□□□ -0.59
CLK4-210ENST00000522136 MCFD2Q8NI22 146 aa11.34□□□□□ -0.59
CLK4-210ENST00000522136 ZNF671Q8TAW3 534 aa11.34□□□□□ -0.59
CLK4-210ENST00000522136 FAM3DQ96BQ1 224 aa11.34□□□□□ -0.59
CLK4-210ENST00000522136 TRAF4Q9BUZ4 470 aaPredicted RBP11.34□□□□□ -0.59
CLK4-210ENST00000522136 MS4A5Q9H3V2 200 aa11.34□□□□□ -0.59
CLK4-210ENST00000522136 FAIMQ9NVQ4 179 aa11.34□□□□□ -0.59
CLK4-210ENST00000522136 TREM2Q9NZC2 230 aa11.34□□□□□ -0.59
CLK4-210ENST00000522136 COMMD3Q9UBI1 195 aa11.34□□□□□ -0.59
CLK4-210ENST00000522136 OR5V1Q9UGF6 321 aa11.34□□□□□ -0.59
CLK4-210ENST00000522136 USF3Q68DE3 2245 aa11.33□□□□□ -0.59
CLK4-210ENST00000522136 A6NLC8 198 aa11.33□□□□□ -0.6
CLK4-210ENST00000522136 CTDSP2O14595 271 aa11.33□□□□□ -0.6
CLK4-210ENST00000522136 CDIPTO14735 213 aa11.33□□□□□ -0.6
CLK4-210ENST00000522136 TPD52L2O43399 206 aaKnown RBP11.33□□□□□ -0.6
CLK4-210ENST00000522136 CALCBP10092 127 aa11.33□□□□□ -0.6
CLK4-210ENST00000522136 BMXP51813 675 aa11.33□□□□□ -0.6
CLK4-210ENST00000522136 RIN1Q13671 783 aa11.33□□□□□ -0.6
CLK4-210ENST00000522136 C2orf76Q3KRA6 126 aa11.33□□□□□ -0.6
CLK4-210ENST00000522136 TGIF2LYQ8IUE0 185 aa11.33□□□□□ -0.6
CLK4-210ENST00000522136 CROCCP3Q8IVE0 287 aa11.33□□□□□ -0.6
CLK4-210ENST00000522136 OR51F2Q8NH61 342 aa11.33□□□□□ -0.6
CLK4-210ENST00000522136 LGALS14Q8TCE9 139 aa11.33□□□□□ -0.6
CLK4-210ENST00000522136 AQP3Q92482 292 aa11.33□□□□□ -0.6
CLK4-210ENST00000522136 SLAMF9Q96A28 289 aa11.33□□□□□ -0.6
CLK4-210ENST00000522136 C1orf147Q96MC9 270 aaPredicted RBP11.33□□□□□ -0.6
CLK4-210ENST00000522136 ZNF488Q96MN9 340 aa11.33□□□□□ -0.6
CLK4-210ENST00000522136 ELL3Q9HB65 397 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms