RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 ALKBH7Q9BT30 221 aaPredicted RBP3□□□□□ -1.93
VPS13B-208ENST00000521037 NAT9Q9BTE0 207 aa3□□□□□ -1.93
VPS13B-208ENST00000521037 MRPL13Q9BYD1 178 aaKnown RBP3□□□□□ -1.93
VPS13B-208ENST00000521037 DERL2Q9GZP9 239 aa3□□□□□ -1.93
VPS13B-208ENST00000521037 RIMS4Q9H426 269 aaPredicted RBP3□□□□□ -1.93
VPS13B-208ENST00000521037 C5orf66Q9H5L9 145 aa3□□□□□ -1.93
VPS13B-208ENST00000521037 WDR76Q9H967 626 aa3□□□□□ -1.93
VPS13B-208ENST00000521037 SLCO1B3Q9NPD5 702 aa3□□□□□ -1.93
VPS13B-208ENST00000521037 CTPS2Q9NRF8 586 aa3□□□□□ -1.93
VPS13B-208ENST00000521037 UBQLN4Q9NRR5 601 aa3□□□□□ -1.93
VPS13B-208ENST00000521037 ACER3Q9NUN7 267 aa3□□□□□ -1.93
VPS13B-208ENST00000521037 TAS2R9Q9NYW1 312 aa3□□□□□ -1.93
VPS13B-208ENST00000521037 TAS2R7Q9NYW3 318 aa3□□□□□ -1.93
VPS13B-208ENST00000521037 PTTG2Q9NZH5 202 aa3□□□□□ -1.93
VPS13B-208ENST00000521037 CTSZQ9UBR2 303 aa3□□□□□ -1.93
VPS13B-208ENST00000521037 CAB39Q9Y376 341 aaPredicted RBP3□□□□□ -1.93
VPS13B-208ENST00000521037 TMED7Q9Y3B3 224 aa3□□□□□ -1.93
VPS13B-208ENST00000521037 NUP214P35658 2090 aaPredicted RBP3□□□□□ -1.93
VPS13B-208ENST00000521037 FAT4Q6V0I7 4981 aa3□□□□□ -1.93
VPS13B-208ENST00000521037 FAT3Q8TDW7 4589 aa2.99□□□□□ -1.93
VPS13B-208ENST00000521037 A0A0U1RQV5 110 aa2.99□□□□□ -1.93
VPS13B-208ENST00000521037 A0A1W2PN81 502 aa2.99□□□□□ -1.93
VPS13B-208ENST00000521037 ISPDA4D126 451 aa2.99□□□□□ -1.93
VPS13B-208ENST00000521037 ZNF879B4DU55 563 aa2.99□□□□□ -1.93
VPS13B-208ENST00000521037 H3BNX3 289 aa2.99□□□□□ -1.93
VPS13B-208ENST00000521037 P2RY10O00398 339 aa2.99□□□□□ -1.93
VPS13B-208ENST00000521037 DENRO43583 198 aaKnown RBP2.99□□□□□ -1.93
VPS13B-208ENST00000521037 SNNO75324 88 aaPredicted RBP2.99□□□□□ -1.93
VPS13B-208ENST00000521037 GMNNO75496 209 aa2.99□□□□□ -1.93
VPS13B-208ENST00000521037 KRT36O76013 467 aa2.99□□□□□ -1.93
VPS13B-208ENST00000521037 TNFAIP8O95379 198 aa2.99□□□□□ -1.93
VPS13B-208ENST00000521037 FSTL3O95633 263 aa2.99□□□□□ -1.93
VPS13B-208ENST00000521037 TFAP2AP05549 437 aa2.99□□□□□ -1.93
VPS13B-208ENST00000521037 ALOX5P09917 674 aa2.99□□□□□ -1.93
VPS13B-208ENST00000521037 PATE4P0C8F1 98 aa2.99□□□□□ -1.93
VPS13B-208ENST00000521037 RRASP10301 218 aa2.99□□□□□ -1.93
VPS13B-208ENST00000521037 MYL2P10916 166 aa2.99□□□□□ -1.93
VPS13B-208ENST00000521037 CCL2P13500 99 aa2.99□□□□□ -1.93
VPS13B-208ENST00000521037 UQCRBP14927 111 aa2.99□□□□□ -1.93
VPS13B-208ENST00000521037 PAX6P26367 422 aa2.99□□□□□ -1.93
VPS13B-208ENST00000521037 PRDX2P32119 198 aa2.99□□□□□ -1.93
VPS13B-208ENST00000521037 CHRNA7P36544 502 aa2.99□□□□□ -1.93
VPS13B-208ENST00000521037 RPL5P46777 297 aaKnown RBP2.99□□□□□ -1.93
VPS13B-208ENST00000521037 GLO1Q04760 184 aa2.99□□□□□ -1.93
VPS13B-208ENST00000521037 TRAF3Q13114 568 aa2.99□□□□□ -1.93
VPS13B-208ENST00000521037 CYLC2Q14093 348 aaPredicted RBP2.99□□□□□ -1.93
VPS13B-208ENST00000521037 PTGR1Q14914 329 aa2.99□□□□□ -1.93
VPS13B-208ENST00000521037 HEPACAMQ14CZ8 416 aa2.99□□□□□ -1.93
VPS13B-208ENST00000521037 MAPK14Q16539 360 aa2.99□□□□□ -1.93
VPS13B-208ENST00000521037 GPR157Q5UAW9 335 aa2.99□□□□□ -1.93
VPS13B-208ENST00000521037 C1orf146Q5VVC0 180 aa2.99□□□□□ -1.93
VPS13B-208ENST00000521037 WDR25Q64LD2 544 aaPredicted RBP2.99□□□□□ -1.93
VPS13B-208ENST00000521037 HIST2H2AA3Q6FI13 130 aa2.99□□□□□ -1.93
VPS13B-208ENST00000521037 FAM45BPQ6NSW5 357 aa2.99□□□□□ -1.93
VPS13B-208ENST00000521037 IZUMO2Q6UXV1 221 aa2.99□□□□□ -1.93
VPS13B-208ENST00000521037 OLIG3Q7RTU3 272 aa2.99□□□□□ -1.93
VPS13B-208ENST00000521037 AAED1Q7RTV5 226 aa2.99□□□□□ -1.93
VPS13B-208ENST00000521037 DHDDSQ86SQ9 333 aa2.99□□□□□ -1.93
VPS13B-208ENST00000521037 COMTD1Q86VU5 262 aa2.99□□□□□ -1.93
VPS13B-208ENST00000521037 NUDCD3Q8IVD9 361 aa2.99□□□□□ -1.93
VPS13B-208ENST00000521037 TMEM123Q8N131 208 aa2.99□□□□□ -1.93
VPS13B-208ENST00000521037 C4orf33Q8N1A6 199 aa2.99□□□□□ -1.93
VPS13B-208ENST00000521037 TCAIMQ8N3R3 496 aa2.99□□□□□ -1.93
VPS13B-208ENST00000521037 FGFRL1Q8N441 504 aa2.99□□□□□ -1.93
VPS13B-208ENST00000521037 Q8N7P7 452 aa2.99□□□□□ -1.93
VPS13B-208ENST00000521037 SMYD1Q8NB12 490 aa2.99□□□□□ -1.93
VPS13B-208ENST00000521037 ICA1LQ8NDH6 482 aa2.99□□□□□ -1.93
VPS13B-208ENST00000521037 FAM45AQ8TCE6 357 aa2.99□□□□□ -1.93
VPS13B-208ENST00000521037 DCAKDQ8WVC6 231 aa2.99□□□□□ -1.93
VPS13B-208ENST00000521037 EXOSC8Q96B26 276 aaKnown RBP2.99□□□□□ -1.93
VPS13B-208ENST00000521037 CCDC126Q96EE4 140 aa2.99□□□□□ -1.93
VPS13B-208ENST00000521037 P2RX4Q99571 388 aa2.99□□□□□ -1.93
VPS13B-208ENST00000521037 SERPINI1Q99574 410 aa2.99□□□□□ -1.93
VPS13B-208ENST00000521037 CCT7Q99832 543 aa2.99□□□□□ -1.93
VPS13B-208ENST00000521037 KCNS3Q9BQ31 491 aa2.99□□□□□ -1.93
VPS13B-208ENST00000521037 TMEM246Q9BRR3 403 aa2.99□□□□□ -1.93
VPS13B-208ENST00000521037 CHID1Q9BWS9 393 aa2.99□□□□□ -1.93
VPS13B-208ENST00000521037 CDCA4Q9BXL8 241 aa2.99□□□□□ -1.93
VPS13B-208ENST00000521037 NMUR2Q9GZQ4 415 aa2.99□□□□□ -1.93
VPS13B-208ENST00000521037 HIPK2Q9H2X6 1198 aa2.99□□□□□ -1.93
VPS13B-208ENST00000521037 RANBP3Q9H6Z4 567 aaPredicted RBP2.99□□□□□ -1.93
VPS13B-208ENST00000521037 RNF121Q9H920 327 aa2.99□□□□□ -1.93
VPS13B-208ENST00000521037 CAB39LQ9H9S4 337 aa2.99□□□□□ -1.93
VPS13B-208ENST00000521037 S100A14Q9HCY8 104 aa2.99□□□□□ -1.93
VPS13B-208ENST00000521037 TCF7L2Q9NQB0 619 aa2.99□□□□□ -1.93
VPS13B-208ENST00000521037 C8orf4Q9NR00 106 aa2.99□□□□□ -1.93
VPS13B-208ENST00000521037 TMEM106BQ9NUM4 274 aa2.99□□□□□ -1.93
VPS13B-208ENST00000521037 MDFICQ9P1T7 246 aa2.99□□□□□ -1.93
VPS13B-208ENST00000521037 OR5V1Q9UGF6 321 aa2.99□□□□□ -1.93
VPS13B-208ENST00000521037 ATP6V1HQ9UI12 483 aa2.99□□□□□ -1.93
VPS13B-208ENST00000521037 PSORS1C1Q9UIG5 152 aa2.99□□□□□ -1.93
VPS13B-208ENST00000521037 ZNF346Q9UL40 294 aaKnown RBP2.99□□□□□ -1.93
VPS13B-208ENST00000521037 RAB26Q9ULW5 256 aa2.99□□□□□ -1.93
VPS13B-208ENST00000521037 PRPF19Q9UMS4 504 aaKnown RBP2.99□□□□□ -1.93
VPS13B-208ENST00000521037 STUB1Q9UNE7 303 aa2.99□□□□□ -1.93
VPS13B-208ENST00000521037 TRAPPC4Q9Y296 219 aa2.99□□□□□ -1.93
VPS13B-208ENST00000521037 HDGFL3Q9Y3E1 203 aa2.99□□□□□ -1.93
VPS13B-208ENST00000521037 MUC2Q02817 5179 aa2.99□□□□□ -1.93
VPS13B-208ENST00000521037 A0A0G2JPF8 293 aa2.98□□□□□ -1.93
VPS13B-208ENST00000521037 TCRBV9S1A1TA0A576 114 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms