RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 LINC00469Q8N7U9 141 aa1.52□□□□□ -2.17
SKP1-207ENST00000520417 SLC26A10Q8NG04 563 aa1.52□□□□□ -2.17
SKP1-207ENST00000520417 NAT6Q93015 286 aa1.52□□□□□ -2.17
SKP1-207ENST00000520417 HGDQ93099 445 aa1.52□□□□□ -2.17
SKP1-207ENST00000520417 YIPF6Q96EC8 236 aa1.52□□□□□ -2.17
SKP1-207ENST00000520417 MRPL48Q96GC5 212 aaKnown RBP1.52□□□□□ -2.17
SKP1-207ENST00000520417 ARV1Q9H2C2 271 aa1.52□□□□□ -2.17
SKP1-207ENST00000520417 BLZF1Q9H2G9 400 aa1.52□□□□□ -2.17
SKP1-207ENST00000520417 PLEKHF2Q9H8W4 249 aa1.52□□□□□ -2.17
SKP1-207ENST00000520417 HMGXB4Q9UGU5 601 aa1.52□□□□□ -2.17
SKP1-207ENST00000520417 PPIL1Q9Y3C6 166 aa1.52□□□□□ -2.17
SKP1-207ENST00000520417 HMCN1Q96RW7 5635 aa1.52□□□□□ -2.17
SKP1-207ENST00000520417 PHLPP2Q6ZVD8 1323 aa1.51□□□□□ -2.17
SKP1-207ENST00000520417 TRAV8-6A0A0B4J262 113 aa1.51□□□□□ -2.17
SKP1-207ENST00000520417 A0A0B4J2E0 115 aa1.51□□□□□ -2.17
SKP1-207ENST00000520417 CCL15-CCL14A0A0B4J2E2 113 aa1.51□□□□□ -2.17
SKP1-207ENST00000520417 GCGP01275 180 aa1.51□□□□□ -2.17
SKP1-207ENST00000520417 TACSTD2P09758 323 aa1.51□□□□□ -2.17
SKP1-207ENST00000520417 SLC35G6P0C7Q6 338 aa1.51□□□□□ -2.17
SKP1-207ENST00000520417 IL3RAP26951 378 aa1.51□□□□□ -2.17
SKP1-207ENST00000520417 CCT6AP40227 531 aaKnown RBP1.51□□□□□ -2.17
SKP1-207ENST00000520417 PSMB2P49721 201 aa1.51□□□□□ -2.17
SKP1-207ENST00000520417 RGS6P49758 472 aa1.51□□□□□ -2.17
SKP1-207ENST00000520417 GZMMP51124 257 aa1.51□□□□□ -2.17
SKP1-207ENST00000520417 BCAP31P51572 246 aa1.51□□□□□ -2.17
SKP1-207ENST00000520417 GRB2P62993 217 aaKnown RBP1.51□□□□□ -2.17
SKP1-207ENST00000520417 SLC35A1P78382 337 aa1.51□□□□□ -2.17
SKP1-207ENST00000520417 LCN2P80188 198 aa1.51□□□□□ -2.17
SKP1-207ENST00000520417 RPL18AQ02543 176 aaKnown RBP1.51□□□□□ -2.17
SKP1-207ENST00000520417 C2orf54Q08AI8 447 aa1.51□□□□□ -2.17
SKP1-207ENST00000520417 LAMTOR4Q0VGL1 99 aa1.51□□□□□ -2.17
SKP1-207ENST00000520417 CCL15Q16663 113 aa1.51□□□□□ -2.17
SKP1-207ENST00000520417 HIKESHIQ53FT3 197 aa1.51□□□□□ -2.17
SKP1-207ENST00000520417 SLC7A5P1Q8MH63 180 aa1.51□□□□□ -2.17
SKP1-207ENST00000520417 CYB561A3Q8NBI2 242 aa1.51□□□□□ -2.17
SKP1-207ENST00000520417 OR10Z1Q8NGY1 313 aa1.51□□□□□ -2.17
SKP1-207ENST00000520417 ZNF420Q8TAQ5 688 aaPredicted RBP1.51□□□□□ -2.17
SKP1-207ENST00000520417 PEX13Q92968 403 aa1.51□□□□□ -2.17
SKP1-207ENST00000520417 FAM19A4Q96LR4 140 aa1.51□□□□□ -2.17
SKP1-207ENST00000520417 UBE2E2Q96LR5 201 aa1.51□□□□□ -2.17
SKP1-207ENST00000520417 PDCD1LG2Q9BQ51 273 aa1.51□□□□□ -2.17
SKP1-207ENST00000520417 API5Q9BZZ5 524 aaKnown RBP1.51□□□□□ -2.17
SKP1-207ENST00000520417 STMN4Q9H169 189 aaPredicted RBP1.51□□□□□ -2.17
SKP1-207ENST00000520417 ARMC7Q9H6L4 198 aa1.51□□□□□ -2.17
SKP1-207ENST00000520417 FANCEQ9HB96 536 aa1.51□□□□□ -2.17
SKP1-207ENST00000520417 SLC22A7Q9Y694 548 aa1.51□□□□□ -2.17
SKP1-207ENST00000520417 NPHP4O75161 1426 aaPredicted RBP1.5□□□□□ -2.17
SKP1-207ENST00000520417 TTC41PQ6P2S7 1318 aa1.5□□□□□ -2.17
SKP1-207ENST00000520417 IGHV6-1A0A0B4J1U7 121 aa1.5□□□□□ -2.17
SKP1-207ENST00000520417 A0A1B0GTQ1 180 aa1.5□□□□□ -2.17
SKP1-207ENST00000520417 TMEM72A0PK05 275 aa1.5□□□□□ -2.17
SKP1-207ENST00000520417 H0YIV9 168 aa1.5□□□□□ -2.17
SKP1-207ENST00000520417 DFFAO00273 331 aa1.5□□□□□ -2.17
SKP1-207ENST00000520417 SMC2O95347 1197 aa1.5□□□□□ -2.17
SKP1-207ENST00000520417 IGKV1-39P01597 117 aa1.5□□□□□ -2.17
SKP1-207ENST00000520417 IGHV1-46P01743 117 aa1.5□□□□□ -2.17
SKP1-207ENST00000520417 IGKV1D-39P04432 117 aa1.5□□□□□ -2.17
SKP1-207ENST00000520417 HLA-GP17693 338 aa1.5□□□□□ -2.17
SKP1-207ENST00000520417 TGM4P49221 684 aa1.5□□□□□ -2.17
SKP1-207ENST00000520417 CLDN8P56748 225 aa1.5□□□□□ -2.17
SKP1-207ENST00000520417 ATP5G2Q06055 141 aa1.5□□□□□ -2.17
SKP1-207ENST00000520417 TNFRSF9Q07011 255 aa1.5□□□□□ -2.17
SKP1-207ENST00000520417 TRDNQ13061 729 aa1.5□□□□□ -2.17
SKP1-207ENST00000520417 TMEM69Q5SWH9 247 aa1.5□□□□□ -2.17
SKP1-207ENST00000520417 ZNF678Q5SXM1 525 aa1.5□□□□□ -2.17
SKP1-207ENST00000520417 MRPL21Q7Z2W9 205 aaKnown RBP1.5□□□□□ -2.17
SKP1-207ENST00000520417 LRRC8AQ8IWT6 810 aa1.5□□□□□ -2.17
SKP1-207ENST00000520417 RNF10Q8N5U6 811 aaKnown RBP1.5□□□□□ -2.17
SKP1-207ENST00000520417 OR5T3Q8NGG3 340 aa1.5□□□□□ -2.17
SKP1-207ENST00000520417 RBPMSQ93062 196 aaKnown RBP1.5□□□□□ -2.17
SKP1-207ENST00000520417 ISG20Q96AZ6 181 aaKnown RBP1.5□□□□□ -2.17
SKP1-207ENST00000520417 MS4A8Q9BY19 250 aa1.5□□□□□ -2.17
SKP1-207ENST00000520417 IL22Q9GZX6 179 aa1.5□□□□□ -2.17
SKP1-207ENST00000520417 C6orf50Q9HD87 102 aa1.5□□□□□ -2.17
SKP1-207ENST00000520417 PRSS16Q9NQE7 514 aa1.5□□□□□ -2.17
SKP1-207ENST00000520417 OR2S2Q9NQN1 319 aa1.5□□□□□ -2.17
SKP1-207ENST00000520417 INIPQ9NRY2 104 aa1.5□□□□□ -2.17
SKP1-207ENST00000520417 CA10Q9NS85 328 aa1.5□□□□□ -2.17
SKP1-207ENST00000520417 TAS2R1Q9NYW7 299 aa1.5□□□□□ -2.17
SKP1-207ENST00000520417 IFNKQ9P0W0 207 aa1.5□□□□□ -2.17
SKP1-207ENST00000520417 STX18Q9P2W9 335 aaKnown RBP1.5□□□□□ -2.17
SKP1-207ENST00000520417 RABL2AQ9UBK7 228 aaPredicted RBP1.5□□□□□ -2.17
SKP1-207ENST00000520417 PSME2Q9UL46 239 aa1.5□□□□□ -2.17
SKP1-207ENST00000520417 RHBDD3Q9Y3P4 386 aa1.5□□□□□ -2.17
SKP1-207ENST00000520417 TSPOAP1O95153 1857 aa1.5□□□□□ -2.17
SKP1-207ENST00000520417 JCADQ9P266 1359 aa1.49□□□□□ -2.17
SKP1-207ENST00000520417 IGKV1-6A0A0C4DH72 117 aa1.49□□□□□ -2.17
SKP1-207ENST00000520417 GOLGA6L4A6NEF3 574 aa1.49□□□□□ -2.17
SKP1-207ENST00000520417 ZNF99A8MXY4 864 aaPredicted RBP1.49□□□□□ -2.17
SKP1-207ENST00000520417 CASC3O15234 703 aaKnown RBP1.49□□□□□ -2.17
SKP1-207ENST00000520417 CXorf1O96002 111 aa1.49□□□□□ -2.17
SKP1-207ENST00000520417 CDK1P06493 297 aa1.49□□□□□ -2.17
SKP1-207ENST00000520417 KLK1P06870 262 aa1.49□□□□□ -2.17
SKP1-207ENST00000520417 ZNF35P13682 527 aa1.49□□□□□ -2.17
SKP1-207ENST00000520417 NUDT2P50583 147 aa1.49□□□□□ -2.17
SKP1-207ENST00000520417 DAOAP59103 153 aa1.49□□□□□ -2.17
SKP1-207ENST00000520417 TAS2R39P59534 338 aa1.49□□□□□ -2.17
SKP1-207ENST00000520417 DOC2AQ14183 400 aa1.49□□□□□ -2.17
SKP1-207ENST00000520417 ZFAND6Q6FIF0 208 aa1.49□□□□□ -2.17
SKP1-207ENST00000520417 APOBEC3HQ6NTF7 200 aaKnown RBP1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms