RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 OAFQ86UD1 273 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 ANGPTL5Q86XS5 388 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 STX12Q86Y82 276 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 ZDHHC21Q8IVQ6 265 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 SLC34A3Q8N130 599 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 DCAF4L2Q8NA75 395 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 SYT14Q8NB59 555 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 BPIFCQ8NFQ6 507 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 OR11G2Q8NGC1 345 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 OR6C4Q8NGE1 309 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 OR8J2Q8NGG1 315 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 OR52P1PQ8NH57 321 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 OR10A6Q8NH74 314 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 GNPDA2Q8TDQ7 276 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 RXFP4Q8TDU9 374 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 PHYHIPQ92561 330 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 TFGQ92734 400 aaPredicted RBP2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 LHX4Q969G2 390 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 ZNF707Q96C28 371 aaPredicted RBP2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 ECHDC3Q96DC8 303 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 MALSU1Q96EH3 234 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 PPP1R16AQ96I34 528 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 SIGLEC12Q96PQ1 595 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 OR52E6Q96RD3 313 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 HBEGFQ99075 208 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 C7orf50Q9BRJ6 194 aaKnown RBP2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 TCEAL7Q9BRU2 100 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 WRAP53Q9BUR4 548 aaKnown RBP2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 EDEM2Q9BV94 578 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 GGACTQ9BVM4 153 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 MRPL37Q9BZE1 423 aaKnown RBP2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 DPY30Q9C005 99 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 ATG10Q9H0Y0 220 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 LRTM1Q9HBL6 345 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 ADGRL4Q9HBW9 690 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 MRPS30Q9NP92 439 aaKnown RBP2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 IL26Q9NPH9 171 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 MIEF1Q9NQG6 463 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 NIT2Q9NQR4 276 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 TNFRSF19Q9NS68 423 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 TMEM100Q9NV29 134 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 MARCH5Q9NX47 278 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 ELOVL2Q9NXB9 296 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 THUMPD1Q9NXG2 353 aaKnown RBP2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 MS4A12Q9NXJ0 267 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 PDP1Q9P0J1 537 aaPredicted RBP2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 DHCR7Q9UBM7 475 aaKnown RBP2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 SSR3Q9UNL2 185 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 SAMD4AQ9UPU9 718 aaKnown RBP2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 VSIG4Q9Y279 399 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 TP53TG5Q9Y2B4 290 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 FIS1Q9Y3D6 152 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 RNF115Q9Y4L5 304 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 ORC6Q9Y5N6 252 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 CASP8AP2Q9UKL3 1982 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 SCN10AQ9Y5Y9 1956 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 FRMPD3Q5JV73 1810 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 PLXNB3Q9ULL4 1909 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 HEATR5AQ86XA9 2040 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 AGRNO00468 2067 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 A0A0U1RRA0 63 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 TMEM89A2RUT3 159 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 LRIT2A6NDA9 550 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 GABRR3A8MPY1 467 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 C2orf74A8MZ97 194 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 WASH3PC4AMC7 463 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 C11orf98E9PRG8 122 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 H0YIV9 168 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 GPR31O00270 319 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 FOXE1O00358 373 aaPredicted RBP2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 SAP18O00422 153 aaKnown RBP2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 RFXANKO14593 260 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 GSTZ1O43708 216 aaPredicted RBP2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 MPZL2O60487 215 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 TBX19O60806 448 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 TSC22D2O75157 780 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 STX11O75558 287 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 STK17BO94768 372 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 CDRT1O95170 752 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 PDYNP01213 254 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 IFNA10P01566 189 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 IL5P05113 134 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 SERPINA5P05154 406 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 RHOCP08134 193 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 PIRTP0C851 137 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 LIMS3P0CW19 117 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 LIMS4P0CW20 117 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 CD79AP11912 226 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 ADRB3P13945 408 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 PGAM2P15259 253 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 RPA2P15927 270 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 ABOP16442 354 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 ELK1P19419 428 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 RAB3BP20337 219 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 NFYAP23511 347 aaPredicted RBP2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 PSMA1P25786 263 aaKnown RBP2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 LCN1P31025 176 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 S100A11P31949 105 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 S100A3P33764 101 aa2.45□□□□□ -2.02
HMGB1P41-201ENST00000520234 KDELR2P33947 212 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms