RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 GOLGA8TH3BQL2 631 aa3.53□□□□□ -1.84
HMGB1P23-201ENST00000518743 SIRPB1O00241 398 aa3.53□□□□□ -1.84
HMGB1P23-201ENST00000518743 SPOPO43791 374 aa3.53□□□□□ -1.84
HMGB1P23-201ENST00000518743 MGRN1O60291 552 aa3.53□□□□□ -1.84
HMGB1P23-201ENST00000518743 STX10O60499 249 aa3.53□□□□□ -1.84
HMGB1P23-201ENST00000518743 ZNF253O75346 499 aa3.53□□□□□ -1.84
HMGB1P23-201ENST00000518743 OR2J3O76001 311 aa3.53□□□□□ -1.84
HMGB1P23-201ENST00000518743 GAPDHP04406 335 aaKnown RBP3.53□□□□□ -1.84
HMGB1P23-201ENST00000518743 ERCC1P07992 297 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P23-201ENST00000518743 TACSTD2P09758 323 aa3.53□□□□□ -1.84
HMGB1P23-201ENST00000518743 PRKACAP17612 351 aa3.53□□□□□ -1.84
HMGB1P23-201ENST00000518743 MSR1P21757 451 aa3.53□□□□□ -1.84
HMGB1P23-201ENST00000518743 NAA10P41227 235 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P23-201ENST00000518743 TFPI2P48307 235 aa3.53□□□□□ -1.84
HMGB1P23-201ENST00000518743 UGT2B15P54855 530 aa3.53□□□□□ -1.84
HMGB1P23-201ENST00000518743 IFT88Q13099 833 aa3.53□□□□□ -1.84
HMGB1P23-201ENST00000518743 SLC22A6Q4U2R8 563 aa3.53□□□□□ -1.84
HMGB1P23-201ENST00000518743 PAN3Q58A45 887 aaKnown RBP3.53□□□□□ -1.84
HMGB1P23-201ENST00000518743 KLF17Q5JT82 389 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P23-201ENST00000518743 GFI1BQ5VTD9 330 aa3.53□□□□□ -1.84
HMGB1P23-201ENST00000518743 RNLSQ5VYX0 342 aa3.53□□□□□ -1.84
HMGB1P23-201ENST00000518743 ZNF343Q6P1L6 599 aa3.53□□□□□ -1.84
HMGB1P23-201ENST00000518743 TMEM53Q6P2H8 277 aa3.53□□□□□ -1.84
HMGB1P23-201ENST00000518743 TTC23LQ6PF05 361 aa3.53□□□□□ -1.84
HMGB1P23-201ENST00000518743 MOB1BQ7L9L4 216 aa3.53□□□□□ -1.84
HMGB1P23-201ENST00000518743 SDR9C7Q8NEX9 313 aa3.53□□□□□ -1.84
HMGB1P23-201ENST00000518743 OR4S1Q8NGB4 309 aa3.53□□□□□ -1.84
HMGB1P23-201ENST00000518743 OR4K14Q8NGD5 310 aa3.53□□□□□ -1.84
HMGB1P23-201ENST00000518743 OR4A4PQ8NGN8 299 aa3.53□□□□□ -1.84
HMGB1P23-201ENST00000518743 OR5AR1Q8NGP9 310 aa3.53□□□□□ -1.84
HMGB1P23-201ENST00000518743 OR51Q1Q8NH59 317 aa3.53□□□□□ -1.84
HMGB1P23-201ENST00000518743 GLYATL2Q8WU03 294 aa3.53□□□□□ -1.84
HMGB1P23-201ENST00000518743 TFGQ92734 400 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P23-201ENST00000518743 RERGQ96A58 199 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P23-201ENST00000518743 S100PBPQ96BU1 408 aa3.53□□□□□ -1.84
HMGB1P23-201ENST00000518743 ZNF285Q96NJ3 590 aa3.53□□□□□ -1.84
HMGB1P23-201ENST00000518743 ZNF599Q96NL3 588 aa3.53□□□□□ -1.84
HMGB1P23-201ENST00000518743 KIR2DL4Q99706 377 aa3.53□□□□□ -1.84
HMGB1P23-201ENST00000518743 VGLL1Q99990 258 aa3.53□□□□□ -1.84
HMGB1P23-201ENST00000518743 DHRS9Q9BPW9 319 aa3.53□□□□□ -1.84
HMGB1P23-201ENST00000518743 IL26Q9NPH9 171 aa3.53□□□□□ -1.84
HMGB1P23-201ENST00000518743 ZNHIT6Q9NWK9 470 aaKnown RBP3.53□□□□□ -1.84
HMGB1P23-201ENST00000518743 GIN1Q9NXP7 522 aa3.53□□□□□ -1.84
HMGB1P23-201ENST00000518743 KCNIP1Q9NZI2 227 aa3.53□□□□□ -1.84
HMGB1P23-201ENST00000518743 ADAM22Q9P0K1 906 aa3.53□□□□□ -1.84
HMGB1P23-201ENST00000518743 MDFICQ9P1T7 246 aa3.53□□□□□ -1.84
HMGB1P23-201ENST00000518743 BTNL2Q9UIR0 455 aa3.53□□□□□ -1.84
HMGB1P23-201ENST00000518743 ASF1AQ9Y294 204 aa3.53□□□□□ -1.84
HMGB1P23-201ENST00000518743 IGLV8-61A0A075B6I0 122 aa3.52□□□□□ -1.85
HMGB1P23-201ENST00000518743 A0A087WYN8 130 aa3.52□□□□□ -1.85
HMGB1P23-201ENST00000518743 IGHV3-35A0A0C4DH35 117 aa3.52□□□□□ -1.85
HMGB1P23-201ENST00000518743 SLC22A20A6NK97 555 aa3.52□□□□□ -1.85
HMGB1P23-201ENST00000518743 SUPT3HB4E1H0 165 aa3.52□□□□□ -1.85
HMGB1P23-201ENST00000518743 CLDN34H7C241 214 aa3.52□□□□□ -1.85
HMGB1P23-201ENST00000518743 GFYI3L273 518 aa3.52□□□□□ -1.85
HMGB1P23-201ENST00000518743 SERF1AO75920 110 aa3.52□□□□□ -1.85
HMGB1P23-201ENST00000518743 SNAPINO95295 136 aa3.52□□□□□ -1.85
HMGB1P23-201ENST00000518743 LY6G6CO95867 125 aa3.52□□□□□ -1.85
HMGB1P23-201ENST00000518743 SEMG1P04279 462 aa3.52□□□□□ -1.85
HMGB1P23-201ENST00000518743 IFNW1P05000 195 aa3.52□□□□□ -1.85
HMGB1P23-201ENST00000518743 ALDOBP05062 364 aa3.52□□□□□ -1.85
HMGB1P23-201ENST00000518743 CRHP06850 196 aa3.52□□□□□ -1.85
HMGB1P23-201ENST00000518743 PIRTP0C851 137 aa3.52□□□□□ -1.85
HMGB1P23-201ENST00000518743 ZNF43P17038 809 aa3.52□□□□□ -1.85
HMGB1P23-201ENST00000518743 SLC2A5P22732 501 aa3.52□□□□□ -1.85
HMGB1P23-201ENST00000518743 IL32P24001 234 aa3.52□□□□□ -1.85
HMGB1P23-201ENST00000518743 GTF2E2P29084 291 aaKnown RBP3.52□□□□□ -1.85
HMGB1P23-201ENST00000518743 PEBP1P30086 187 aaKnown RBP3.52□□□□□ -1.85
HMGB1P23-201ENST00000518743 GLP1RP43220 463 aa3.52□□□□□ -1.85
HMGB1P23-201ENST00000518743 CX3CR1P49238 355 aa3.52□□□□□ -1.85
HMGB1P23-201ENST00000518743 MRPL19P49406 292 aaKnown RBP3.52□□□□□ -1.85
HMGB1P23-201ENST00000518743 P2RY4P51582 365 aa3.52□□□□□ -1.85
HMGB1P23-201ENST00000518743 TPI1P60174 286 aa3.52□□□□□ -1.85
HMGB1P23-201ENST00000518743 PAX5Q02548 391 aa3.52□□□□□ -1.85
HMGB1P23-201ENST00000518743 TIMM50Q3ZCQ8 353 aa3.52□□□□□ -1.85
HMGB1P23-201ENST00000518743 HSP90AA4PQ58FG1 418 aa3.52□□□□□ -1.85
HMGB1P23-201ENST00000518743 PLCXD3Q63HM9 321 aa3.52□□□□□ -1.85
HMGB1P23-201ENST00000518743 TIGD3Q6B0B8 471 aa3.52□□□□□ -1.85
HMGB1P23-201ENST00000518743 ADNP2Q6IQ32 1131 aa3.52□□□□□ -1.85
HMGB1P23-201ENST00000518743 SLC16A14Q7RTX9 510 aa3.52□□□□□ -1.85
HMGB1P23-201ENST00000518743 OFCC1Q8IZS5 231 aa3.52□□□□□ -1.85
HMGB1P23-201ENST00000518743 LRRC25Q8N386 305 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P23-201ENST00000518743 PLPPR1Q8TBJ4 325 aa3.52□□□□□ -1.85
HMGB1P23-201ENST00000518743 CCDC126Q96EE4 140 aa3.52□□□□□ -1.85
HMGB1P23-201ENST00000518743 PGLYRP4Q96LB8 373 aa3.52□□□□□ -1.85
HMGB1P23-201ENST00000518743 SORT1Q99523 831 aa3.52□□□□□ -1.85
HMGB1P23-201ENST00000518743 SOSTQ9BQB4 213 aa3.52□□□□□ -1.85
HMGB1P23-201ENST00000518743 DOHHQ9BU89 302 aa3.52□□□□□ -1.85
HMGB1P23-201ENST00000518743 RACGAP1Q9H0H5 632 aa3.52□□□□□ -1.85
HMGB1P23-201ENST00000518743 LRRC19Q9H756 370 aa3.52□□□□□ -1.85
HMGB1P23-201ENST00000518743 PLGRKTQ9HBL7 147 aa3.52□□□□□ -1.85
HMGB1P23-201ENST00000518743 EXD2Q9NVH0 621 aa3.52□□□□□ -1.85
HMGB1P23-201ENST00000518743 SLC17A7Q9P2U7 560 aa3.52□□□□□ -1.85
HMGB1P23-201ENST00000518743 GLS2Q9UI32 602 aa3.52□□□□□ -1.85
HMGB1P23-201ENST00000518743 SAR1BQ9Y6B6 198 aa3.52□□□□□ -1.85
HMGB1P23-201ENST00000518743 V9GY05 133 aa3.52□□□□□ -1.85
HMGB1P23-201ENST00000518743 FLG2Q5D862 2391 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P23-201ENST00000518743 IGKV3D-15A0A087WSY6 115 aa3.51□□□□□ -1.85
HMGB1P23-201ENST00000518743 TRAV25A0A0B4J276 109 aa3.51□□□□□ -1.85
HMGB1P23-201ENST00000518743 DPRXA6NFQ7 191 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms