RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 CFL2Q9Y281 166 aa1.51□□□□□ -2.17
SKP1-203ENST00000517625 COL27A1Q8IZC6 1860 aaPredicted RBP1.51□□□□□ -2.17
SKP1-203ENST00000517625 DOCK8Q8NF50 2099 aa1.51□□□□□ -2.17
SKP1-203ENST00000517625 BRWD3Q6RI45 1802 aa1.5□□□□□ -2.17
SKP1-203ENST00000517625 MROH5Q6ZUA9 1318 aa1.5□□□□□ -2.17
SKP1-203ENST00000517625 PHLPP2Q6ZVD8 1323 aa1.5□□□□□ -2.17
SKP1-203ENST00000517625 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.5□□□□□ -2.17
SKP1-203ENST00000517625 TRAV8-6A0A0B4J262 113 aa1.5□□□□□ -2.17
SKP1-203ENST00000517625 A0A0G2JMP0 313 aa1.5□□□□□ -2.17
SKP1-203ENST00000517625 A0A0J9YYE9 177 aa1.5□□□□□ -2.17
SKP1-203ENST00000517625 A0A0X1KG70 313 aa1.5□□□□□ -2.17
SKP1-203ENST00000517625 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.5□□□□□ -2.17
SKP1-203ENST00000517625 TRBC1P01850 177 aa1.5□□□□□ -2.17
SKP1-203ENST00000517625 OR4Q2P0C623 313 aa1.5□□□□□ -2.17
SKP1-203ENST00000517625 HLA-GP17693 338 aa1.5□□□□□ -2.17
SKP1-203ENST00000517625 IVDP26440 423 aa1.5□□□□□ -2.17
SKP1-203ENST00000517625 HLA-DMAP28067 261 aa1.5□□□□□ -2.17
SKP1-203ENST00000517625 HTR2BP41595 481 aa1.5□□□□□ -2.17
SKP1-203ENST00000517625 HCCSP53701 268 aa1.5□□□□□ -2.17
SKP1-203ENST00000517625 MTPNP58546 118 aa1.5□□□□□ -2.17
SKP1-203ENST00000517625 FAM53BQ14153 422 aa1.5□□□□□ -2.17
SKP1-203ENST00000517625 ZNF235Q14590 738 aa1.5□□□□□ -2.17
SKP1-203ENST00000517625 WDR43Q15061 677 aaKnown RBP eCLIP1.5□□□□□ -2.17
SKP1-203ENST00000517625 STK38Q15208 465 aa1.5□□□□□ -2.17
SKP1-203ENST00000517625 TSC22D1Q15714 1073 aa1.5□□□□□ -2.17
SKP1-203ENST00000517625 TOMM34Q15785 309 aaPredicted RBP1.5□□□□□ -2.17
SKP1-203ENST00000517625 USP50Q70EL3 339 aaPredicted RBP1.5□□□□□ -2.17
SKP1-203ENST00000517625 TRMT10CQ7L0Y3 403 aaKnown RBP1.5□□□□□ -2.17
SKP1-203ENST00000517625 ORAOV1Q8WV07 137 aa1.5□□□□□ -2.17
SKP1-203ENST00000517625 OR8D1Q8WZ84 308 aa1.5□□□□□ -2.17
SKP1-203ENST00000517625 TSNAXQ99598 290 aaKnown RBP1.5□□□□□ -2.17
SKP1-203ENST00000517625 SEC22CQ9BRL7 303 aa1.5□□□□□ -2.17
SKP1-203ENST00000517625 TSGA10Q9BZW7 698 aa1.5□□□□□ -2.17
SKP1-203ENST00000517625 CRLF2Q9HC73 371 aa1.5□□□□□ -2.17
SKP1-203ENST00000517625 LZTFL1Q9NQ48 299 aa1.5□□□□□ -2.17
SKP1-203ENST00000517625 FBXO8Q9NRD0 319 aa1.5□□□□□ -2.17
SKP1-203ENST00000517625 INIPQ9NRY2 104 aa1.5□□□□□ -2.17
SKP1-203ENST00000517625 IFNKQ9P0W0 207 aa1.5□□□□□ -2.17
SKP1-203ENST00000517625 STX18Q9P2W9 335 aaKnown RBP1.5□□□□□ -2.17
SKP1-203ENST00000517625 RWDD2AQ9UIY3 292 aa1.5□□□□□ -2.17
SKP1-203ENST00000517625 RAB22AQ9UL26 194 aa1.5□□□□□ -2.17
SKP1-203ENST00000517625 SLC7A11Q9UPY5 501 aa1.5□□□□□ -2.17
SKP1-203ENST00000517625 RHBDD3Q9Y3P4 386 aa1.5□□□□□ -2.17
SKP1-203ENST00000517625 KLF12Q9Y4X4 402 aa1.5□□□□□ -2.17
SKP1-203ENST00000517625 TRANK1O15050 2925 aa1.5□□□□□ -2.17
SKP1-203ENST00000517625 AQRO60306 1485 aaKnown RBP eCLIP1.5□□□□□ -2.173e-6■■□□□ 13.8
SKP1-203ENST00000517625 ARPC4-TTLL3A0A0A6YYG9 625 aa1.49□□□□□ -2.17
SKP1-203ENST00000517625 C9JQL5 133 aa1.49□□□□□ -2.17
SKP1-203ENST00000517625 H7C2Y5 167 aa1.49□□□□□ -2.17
SKP1-203ENST00000517625 ETHE1O95571 254 aa1.49□□□□□ -2.17
SKP1-203ENST00000517625 FSTL3O95633 263 aa1.49□□□□□ -2.17
SKP1-203ENST00000517625 PFN1P07737 140 aaKnown RBP1.49□□□□□ -2.17
SKP1-203ENST00000517625 OR5AL1P0C617 328 aa1.49□□□□□ -2.17
SKP1-203ENST00000517625 INAFM2P0DMQ5 153 aa1.49□□□□□ -2.17
SKP1-203ENST00000517625 CD28P10747 220 aa1.49□□□□□ -2.17
SKP1-203ENST00000517625 HOXB8P17481 243 aaPredicted RBP1.49□□□□□ -2.17
SKP1-203ENST00000517625 SRMP19623 302 aa1.49□□□□□ -2.17
SKP1-203ENST00000517625 COL8A2P25067 703 aa1.49□□□□□ -2.17
SKP1-203ENST00000517625 CD34P28906 385 aa1.49□□□□□ -2.17
SKP1-203ENST00000517625 TGFBR1P36897 503 aa1.49□□□□□ -2.17
SKP1-203ENST00000517625 CFHR2P36980 270 aa1.49□□□□□ -2.17
SKP1-203ENST00000517625 GRB2P62993 217 aaKnown RBP1.49□□□□□ -2.17
SKP1-203ENST00000517625 SLC35B1P78383 322 aa1.49□□□□□ -2.17
SKP1-203ENST00000517625 ATP5G2Q06055 141 aa1.49□□□□□ -2.17
SKP1-203ENST00000517625 MEF2CQ06413 473 aaPredicted RBP1.49□□□□□ -2.17
SKP1-203ENST00000517625 LAMTOR4Q0VGL1 99 aa1.49□□□□□ -2.17
SKP1-203ENST00000517625 TAF9Q16594 264 aa1.49□□□□□ -2.17
SKP1-203ENST00000517625 LINC00303Q3SY05 128 aa1.49□□□□□ -2.17
SKP1-203ENST00000517625 NKAIN1Q4KMZ8 207 aa1.49□□□□□ -2.17
SKP1-203ENST00000517625 TMEM69Q5SWH9 247 aa1.49□□□□□ -2.17
SKP1-203ENST00000517625 ZNF678Q5SXM1 525 aa1.49□□□□□ -2.17
SKP1-203ENST00000517625 TBPL2Q6SJ96 375 aa1.49□□□□□ -2.17
SKP1-203ENST00000517625 TMEM136Q6ZRR5 245 aa1.49□□□□□ -2.17
SKP1-203ENST00000517625 DAZ4Q86SG3 579 aaKnown RBP1.49□□□□□ -2.17
SKP1-203ENST00000517625 SGPP2Q8IWX5 399 aa1.49□□□□□ -2.17
SKP1-203ENST00000517625 ZNF664Q8N3J9 261 aa1.49□□□□□ -2.17
SKP1-203ENST00000517625 OR2M7Q8NG81 312 aa1.49□□□□□ -2.17
SKP1-203ENST00000517625 OR8A1Q8NGG7 326 aa1.49□□□□□ -2.17
SKP1-203ENST00000517625 ZNF420Q8TAQ5 688 aaPredicted RBP1.49□□□□□ -2.17
SKP1-203ENST00000517625 TVP23CQ96ET8 276 aa1.49□□□□□ -2.17
SKP1-203ENST00000517625 Q96MT0 163 aa1.49□□□□□ -2.17
SKP1-203ENST00000517625 ANP32EQ9BTT0 268 aa1.49□□□□□ -2.17
SKP1-203ENST00000517625 NAA50Q9GZZ1 169 aaKnown RBP1.49□□□□□ -2.17
SKP1-203ENST00000517625 KIR3DX1Q9H7L2 352 aa1.49□□□□□ -2.17
SKP1-203ENST00000517625 CYP3A43Q9HB55 503 aa1.49□□□□□ -2.17
SKP1-203ENST00000517625 RDH14Q9HBH5 336 aa1.49□□□□□ -2.17
SKP1-203ENST00000517625 DAZ1Q9NQZ3 744 aaKnown RBP1.49□□□□□ -2.17
SKP1-203ENST00000517625 TFR2Q9UP52 801 aa1.49□□□□□ -2.17
SKP1-203ENST00000517625 SLC22A7Q9Y694 548 aa1.49□□□□□ -2.17
SKP1-203ENST00000517625 GMNCA6NCL1 334 aa1.48□□□□□ -2.17
SKP1-203ENST00000517625 D6RAR5 112 aa1.48□□□□□ -2.17
SKP1-203ENST00000517625 TCAPO15273 167 aa1.48□□□□□ -2.17
SKP1-203ENST00000517625 TRAPPC6AO75865 159 aa1.48□□□□□ -2.17
SKP1-203ENST00000517625 PLEKHA8P1O95397 391 aa1.48□□□□□ -2.17
SKP1-203ENST00000517625 RGS6P49758 472 aa1.48□□□□□ -2.17
SKP1-203ENST00000517625 NUDT2P50583 147 aa1.48□□□□□ -2.17
SKP1-203ENST00000517625 BCAP31P51572 246 aa1.48□□□□□ -2.17
SKP1-203ENST00000517625 OR12D2P58182 307 aa1.48□□□□□ -2.17
SKP1-203ENST00000517625 MLF1P58340 268 aa1.48□□□□□ -2.17
SKP1-203ENST00000517625 PAFAH1B2P68402 229 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms