RNA–Protein interactions for RNA: ENST00000517494.1

CSGALNACT1-204, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-204ENST00000517494 ERVFRD-1P60508 538 aa12.34□□□□□ -0.43
CSGALNACT1-204ENST00000517494 RPL31P62899 125 aaKnown RBP12.34□□□□□ -0.43
CSGALNACT1-204ENST00000517494 AANATQ16613 207 aa12.34□□□□□ -0.43
CSGALNACT1-204ENST00000517494 ZNF770Q6IQ21 691 aaPredicted RBP12.34□□□□□ -0.43
CSGALNACT1-204ENST00000517494 LHFPL4Q7Z7J7 247 aa12.34□□□□□ -0.43
CSGALNACT1-204ENST00000517494 NDUFA11Q86Y39 141 aa12.34□□□□□ -0.43
CSGALNACT1-204ENST00000517494 OR8B12Q8NGG6 310 aa12.34□□□□□ -0.43
CSGALNACT1-204ENST00000517494 ZNF671Q8TAW3 534 aa12.34□□□□□ -0.43
CSGALNACT1-204ENST00000517494 C1orf21Q9H246 121 aa12.34□□□□□ -0.43
CSGALNACT1-204ENST00000517494 CCDC134Q9H6E4 229 aa12.34□□□□□ -0.43
CSGALNACT1-204ENST00000517494 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.34□□□□□ -0.43
CSGALNACT1-204ENST00000517494 ABCB10Q9NRK6 738 aa12.34□□□□□ -0.43
CSGALNACT1-204ENST00000517494 ZNF222Q9UK12 451 aa12.34□□□□□ -0.43
CSGALNACT1-204ENST00000517494 U3KQV3 271 aa12.34□□□□□ -0.43
CSGALNACT1-204ENST00000517494 NOTCH3Q9UM47 2321 aa12.34□□□□□ -0.43
CSGALNACT1-204ENST00000517494 hCG_1809904A0A1W2PP81 198 aa12.33□□□□□ -0.44
CSGALNACT1-204ENST00000517494 A0A1W2PPE2 198 aa12.33□□□□□ -0.44
CSGALNACT1-204ENST00000517494 A0A1W2PR64 198 aa12.33□□□□□ -0.44
CSGALNACT1-204ENST00000517494 A0A1W2PRV1 198 aa12.33□□□□□ -0.44
CSGALNACT1-204ENST00000517494 SLC1A7O00341 560 aa12.33□□□□□ -0.44
CSGALNACT1-204ENST00000517494 SELENOFO60613 162 aa12.33□□□□□ -0.44
CSGALNACT1-204ENST00000517494 LYNP07948 512 aa12.33□□□□□ -0.44
CSGALNACT1-204ENST00000517494 PIPP12273 146 aaPredicted RBP12.33□□□□□ -0.44
CSGALNACT1-204ENST00000517494 CD33P20138 364 aa12.33□□□□□ -0.44
CSGALNACT1-204ENST00000517494 PRDX6P30041 224 aa12.33□□□□□ -0.44
CSGALNACT1-204ENST00000517494 DCTDP32321 178 aa12.33□□□□□ -0.44
CSGALNACT1-204ENST00000517494 GNG3P63215 75 aa12.33□□□□□ -0.44
CSGALNACT1-204ENST00000517494 FAM76BQ5HYJ3 339 aa12.33□□□□□ -0.44
CSGALNACT1-204ENST00000517494 FOXB2Q5VYV0 432 aa12.33□□□□□ -0.44
CSGALNACT1-204ENST00000517494 TMEM200BQ69YZ2 307 aa12.33□□□□□ -0.44
CSGALNACT1-204ENST00000517494 HAGHLQ6PII5 290 aaPredicted RBP12.33□□□□□ -0.44
CSGALNACT1-204ENST00000517494 CYP2R1Q6VVX0 501 aa12.33□□□□□ -0.44
CSGALNACT1-204ENST00000517494 TEX47Q8TBZ9 253 aa12.33□□□□□ -0.44
CSGALNACT1-204ENST00000517494 PIFOQ8TCI5 191 aa12.33□□□□□ -0.44
CSGALNACT1-204ENST00000517494 ZNF488Q96MN9 340 aa12.33□□□□□ -0.44
CSGALNACT1-204ENST00000517494 CDRT15Q96T59 188 aa12.33□□□□□ -0.44
CSGALNACT1-204ENST00000517494 ELAC2Q9BQ52 826 aaKnown RBP12.33□□□□□ -0.44
CSGALNACT1-204ENST00000517494 FAM107BQ9H098 131 aa12.33□□□□□ -0.44
CSGALNACT1-204ENST00000517494 OR51I2Q9H344 312 aa12.33□□□□□ -0.44
CSGALNACT1-204ENST00000517494 CMC2Q9NRP2 79 aa12.33□□□□□ -0.44
CSGALNACT1-204ENST00000517494 SERTAD4Q9NUC0 356 aa12.33□□□□□ -0.44
CSGALNACT1-204ENST00000517494 RFPL4AA6NLU0 287 aa12.32□□□□□ -0.44
CSGALNACT1-204ENST00000517494 RFPL4AL1F8VTS6 287 aa12.32□□□□□ -0.44
CSGALNACT1-204ENST00000517494 H3BN98 237 aa12.32□□□□□ -0.44
CSGALNACT1-204ENST00000517494 ARG1P05089 322 aa12.32□□□□□ -0.44
CSGALNACT1-204ENST00000517494 CEBPDP49716 269 aaPredicted RBP12.32□□□□□ -0.44
CSGALNACT1-204ENST00000517494 HMGA2P52926 109 aa12.32□□□□□ -0.44
CSGALNACT1-204ENST00000517494 PSMA6P60900 246 aaKnown RBP12.32□□□□□ -0.44
CSGALNACT1-204ENST00000517494 CNN3Q15417 329 aaKnown RBP12.32□□□□□ -0.44
CSGALNACT1-204ENST00000517494 SMIM21Q3B7S5 101 aa12.32□□□□□ -0.44
CSGALNACT1-204ENST00000517494 VAX1Q5SQQ9 334 aa12.32□□□□□ -0.44
CSGALNACT1-204ENST00000517494 PLCXD3Q63HM9 321 aa12.32□□□□□ -0.44
CSGALNACT1-204ENST00000517494 MOB3CQ70IA8 216 aa12.32□□□□□ -0.44
CSGALNACT1-204ENST00000517494 BATF2Q8N1L9 274 aa12.32□□□□□ -0.44
CSGALNACT1-204ENST00000517494 CD177Q8N6Q3 437 aa12.32□□□□□ -0.44
CSGALNACT1-204ENST00000517494 OR2T27Q8NH04 317 aa12.32□□□□□ -0.44
CSGALNACT1-204ENST00000517494 OR5K1Q8NHB7 308 aa12.32□□□□□ -0.44
CSGALNACT1-204ENST00000517494 SDSLQ96GA7 329 aa12.32□□□□□ -0.44
CSGALNACT1-204ENST00000517494 MYLK2Q9H1R3 596 aa12.32□□□□□ -0.44
CSGALNACT1-204ENST00000517494 USE1Q9NZ43 259 aa12.32□□□□□ -0.44
CSGALNACT1-204ENST00000517494 TCF19Q9Y242 345 aa12.32□□□□□ -0.44
CSGALNACT1-204ENST00000517494 SAMHD1Q9Y3Z3 626 aaKnown RBP12.32□□□□□ -0.44
CSGALNACT1-204ENST00000517494 MEX3AA1L020 520 aaKnown RBP12.31□□□□□ -0.44
CSGALNACT1-204ENST00000517494 MEGF11A6BM72 1044 aa12.31□□□□□ -0.44
CSGALNACT1-204ENST00000517494 IGLL1P15814 213 aa12.31□□□□□ -0.44
CSGALNACT1-204ENST00000517494 MAP2K3P46734 347 aa12.31□□□□□ -0.44
CSGALNACT1-204ENST00000517494 ZNF273Q14593 569 aa12.31□□□□□ -0.44
CSGALNACT1-204ENST00000517494 SSX2Q16385 188 aa12.31□□□□□ -0.44
CSGALNACT1-204ENST00000517494 TMEM95Q3KNT9 176 aa12.31□□□□□ -0.44
CSGALNACT1-204ENST00000517494 CEACAM21Q3KPI0 293 aa12.31□□□□□ -0.44
CSGALNACT1-204ENST00000517494 PLBD1Q6P4A8 553 aa12.31□□□□□ -0.44
CSGALNACT1-204ENST00000517494 PGAM4Q8N0Y7 254 aa12.31□□□□□ -0.44
CSGALNACT1-204ENST00000517494 DYNAPQ8N1N2 210 aa12.31□□□□□ -0.44
CSGALNACT1-204ENST00000517494 OTOSQ8NHW6 89 aa12.31□□□□□ -0.44
CSGALNACT1-204ENST00000517494 AQP3Q92482 292 aa12.31□□□□□ -0.44
CSGALNACT1-204ENST00000517494 CDCA4Q9BXL8 241 aa12.31□□□□□ -0.44
CSGALNACT1-204ENST00000517494 PRSS22Q9GZN4 317 aa12.31□□□□□ -0.44
CSGALNACT1-204ENST00000517494 NIPAL2Q9H841 368 aa12.31□□□□□ -0.44
CSGALNACT1-204ENST00000517494 REEP1Q9H902 201 aa12.31□□□□□ -0.44
CSGALNACT1-204ENST00000517494 OR14J1Q9UGF5 321 aa12.31□□□□□ -0.44
CSGALNACT1-204ENST00000517494 KLHDC2Q9Y2U9 406 aa12.31□□□□□ -0.44
CSGALNACT1-204ENST00000517494 OR5B21A6NL26 309 aa12.3□□□□□ -0.44
CSGALNACT1-204ENST00000517494 ADARB2-AS1A8MUL3 147 aa12.3□□□□□ -0.44
CSGALNACT1-204ENST00000517494 GSC2O15499 205 aa12.3□□□□□ -0.44
CSGALNACT1-204ENST00000517494 MTRF1O75570 445 aaKnown RBP12.3□□□□□ -0.44
CSGALNACT1-204ENST00000517494 PF4V1P10720 104 aa12.3□□□□□ -0.44
CSGALNACT1-204ENST00000517494 PRDX2P32119 198 aa12.3□□□□□ -0.44
CSGALNACT1-204ENST00000517494 VDAC2P45880 294 aaPredicted RBP12.3□□□□□ -0.44
CSGALNACT1-204ENST00000517494 RPS7P62081 194 aaKnown RBP12.3□□□□□ -0.44
CSGALNACT1-204ENST00000517494 DYNC1I2Q13409 638 aaKnown RBP12.3□□□□□ -0.44
CSGALNACT1-204ENST00000517494 MICAQ29983 383 aa12.3□□□□□ -0.44
CSGALNACT1-204ENST00000517494 CCBE1Q6UXH8 406 aaPredicted RBP12.3□□□□□ -0.44
CSGALNACT1-204ENST00000517494 ACP7Q6ZNF0 438 aa12.3□□□□□ -0.44
CSGALNACT1-204ENST00000517494 KRT77Q7Z794 578 aa12.3□□□□□ -0.44
CSGALNACT1-204ENST00000517494 ZNF561Q8N587 486 aa12.3□□□□□ -0.44
CSGALNACT1-204ENST00000517494 ZNF454Q8N9F8 522 aa12.3□□□□□ -0.44
CSGALNACT1-204ENST00000517494 RPS4Y2Q8TD47 263 aa12.3□□□□□ -0.44
CSGALNACT1-204ENST00000517494 VNN3Q9NY84 501 aa12.3□□□□□ -0.44
CSGALNACT1-204ENST00000517494 LRP12Q9Y561 859 aa12.3□□□□□ -0.44
CSGALNACT1-204ENST00000517494 A6NDX4 124 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms