RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 HAVCR2Q8TDQ0 301 aa10.62□□□□□ -0.71
CLCN3-210ENST00000515420 AQP3Q92482 292 aa10.62□□□□□ -0.71
CLCN3-210ENST00000515420 RNF166Q96A37 237 aaPredicted RBP10.62□□□□□ -0.71
CLCN3-210ENST00000515420 UPRTQ96BW1 309 aa10.62□□□□□ -0.71
CLCN3-210ENST00000515420 JMJD8Q96S16 334 aa10.62□□□□□ -0.71
CLCN3-210ENST00000515420 ADI1Q9BV57 179 aa10.62□□□□□ -0.71
CLCN3-210ENST00000515420 SUCNR1Q9BXA5 334 aa10.62□□□□□ -0.71
CLCN3-210ENST00000515420 DNAJB11Q9UBS4 358 aa10.62□□□□□ -0.71
CLCN3-210ENST00000515420 NUP50Q9UKX7 468 aa10.62□□□□□ -0.71
CLCN3-210ENST00000515420 LOC107986453A0A1B0GWG9 222 aa10.61□□□□□ -0.71
CLCN3-210ENST00000515420 PQLC2LA1A4F0 135 aa10.61□□□□□ -0.71
CLCN3-210ENST00000515420 ANKRD61A6NGH8 418 aa10.61□□□□□ -0.71
CLCN3-210ENST00000515420 C22orf46C9J442 243 aa10.61□□□□□ -0.71
CLCN3-210ENST00000515420 J3QT63 122 aa10.61□□□□□ -0.71
CLCN3-210ENST00000515420 DVL1O14640 695 aa10.61□□□□□ -0.71
CLCN3-210ENST00000515420 CASQ2O14958 399 aaPredicted RBP10.61□□□□□ -0.71
CLCN3-210ENST00000515420 NOS1APO75052 506 aaPredicted RBP10.61□□□□□ -0.71
CLCN3-210ENST00000515420 ISG15P05161 165 aa10.61□□□□□ -0.71
CLCN3-210ENST00000515420 FPR2P25090 351 aa10.61□□□□□ -0.71
CLCN3-210ENST00000515420 KIR3DL2P43630 455 aa10.61□□□□□ -0.71
CLCN3-210ENST00000515420 TGM4P49221 684 aa10.61□□□□□ -0.71
CLCN3-210ENST00000515420 HILS1P60008 231 aa10.61□□□□□ -0.71
CLCN3-210ENST00000515420 GABPB1Q06547 395 aaPredicted RBP10.61□□□□□ -0.71
CLCN3-210ENST00000515420 KRTAP24-1Q3LI83 254 aa10.61□□□□□ -0.71
CLCN3-210ENST00000515420 KLHL22Q53GT1 634 aa10.61□□□□□ -0.71
CLCN3-210ENST00000515420 TTC23Q5W5X9 447 aa10.61□□□□□ -0.71
CLCN3-210ENST00000515420 PRSS35Q8N3Z0 413 aa10.61□□□□□ -0.71
CLCN3-210ENST00000515420 PNLDC1Q8NA58 520 aaKnown RBP10.61□□□□□ -0.71
CLCN3-210ENST00000515420 OR2G2Q8NGZ5 317 aa10.61□□□□□ -0.71
CLCN3-210ENST00000515420 PP6455Q8WZ26 134 aa10.61□□□□□ -0.71
CLCN3-210ENST00000515420 MED30Q96HR3 178 aa10.61□□□□□ -0.71
CLCN3-210ENST00000515420 JAM3Q9BX67 310 aa10.61□□□□□ -0.71
CLCN3-210ENST00000515420 CHST5Q9GZS9 411 aa10.61□□□□□ -0.71
CLCN3-210ENST00000515420 SMURF1Q9HCE7 757 aa10.61□□□□□ -0.71
CLCN3-210ENST00000515420 RASL12Q9NYN1 266 aa10.61□□□□□ -0.71
CLCN3-210ENST00000515420 POLDIP2Q9Y2S7 368 aa10.61□□□□□ -0.71
CLCN3-210ENST00000515420 IGHV3OR15-7A0A075B7D8 119 aa10.6□□□□□ -0.71
CLCN3-210ENST00000515420 NKX6-3A6NJ46 265 aa10.6□□□□□ -0.71
CLCN3-210ENST00000515420 AKR7A2O43488 359 aa10.6□□□□□ -0.71
CLCN3-210ENST00000515420 RHBDL1O75783 438 aa10.6□□□□□ -0.71
CLCN3-210ENST00000515420 GATBO75879 557 aaKnown RBP10.6□□□□□ -0.71
CLCN3-210ENST00000515420 PLATP00750 562 aa10.6□□□□□ -0.71
CLCN3-210ENST00000515420 HTR1AP08908 422 aa10.6□□□□□ -0.71
CLCN3-210ENST00000515420 ACAA1P09110 424 aaPredicted RBP10.6□□□□□ -0.71
CLCN3-210ENST00000515420 GLRA1P23415 457 aa10.6□□□□□ -0.71
CLCN3-210ENST00000515420 MPZP25189 248 aa10.6□□□□□ -0.71
CLCN3-210ENST00000515420 PEX2P28328 305 aa10.6□□□□□ -0.71
CLCN3-210ENST00000515420 OR12D2P58182 307 aa10.6□□□□□ -0.71
CLCN3-210ENST00000515420 BPIFB3P59826 476 aa10.6□□□□□ -0.71
CLCN3-210ENST00000515420 IL18R1Q13478 541 aa10.6□□□□□ -0.71
CLCN3-210ENST00000515420 KLF17Q5JT82 389 aaPredicted RBP10.6□□□□□ -0.71
CLCN3-210ENST00000515420 ZNF691Q5VV52 312 aa10.6□□□□□ -0.71
CLCN3-210ENST00000515420 HAGHLQ6PII5 290 aaPredicted RBP10.6□□□□□ -0.71
CLCN3-210ENST00000515420 ZNF788Q6ZQV5 615 aa10.6□□□□□ -0.71
CLCN3-210ENST00000515420 C9orf139Q6ZV77 190 aa10.6□□□□□ -0.71
CLCN3-210ENST00000515420 BPIFB2Q8N4F0 458 aa10.6□□□□□ -0.71
CLCN3-210ENST00000515420 POC1AQ8NBT0 407 aa10.6□□□□□ -0.71
CLCN3-210ENST00000515420 SETD9Q8NE22 299 aa10.6□□□□□ -0.71
CLCN3-210ENST00000515420 ANGPTL6Q8NI99 470 aa10.6□□□□□ -0.71
CLCN3-210ENST00000515420 APH1BQ8WW43 257 aa10.6□□□□□ -0.71
CLCN3-210ENST00000515420 PELI1Q96FA3 418 aa10.6□□□□□ -0.71
CLCN3-210ENST00000515420 C4orf36Q96KX1 117 aa10.6□□□□□ -0.71
CLCN3-210ENST00000515420 ALG8Q9BVK2 526 aa10.6□□□□□ -0.71
CLCN3-210ENST00000515420 PKIBQ9C010 78 aa10.6□□□□□ -0.71
CLCN3-210ENST00000515420 WDR13Q9H1Z4 485 aa10.6□□□□□ -0.71
CLCN3-210ENST00000515420 GPR173Q9NS66 373 aa10.6□□□□□ -0.71
CLCN3-210ENST00000515420 NLKQ9UBE8 527 aa10.6□□□□□ -0.71
CLCN3-210ENST00000515420 AASSQ9UDR5 926 aa10.6□□□□□ -0.71
CLCN3-210ENST00000515420 HSPE1-MOB4S4R3N1 261 aa10.6□□□□□ -0.71
CLCN3-210ENST00000515420 IRGMA1A4Y4 181 aa10.59□□□□□ -0.71
CLCN3-210ENST00000515420 OR2AT4A6NND4 320 aa10.59□□□□□ -0.71
CLCN3-210ENST00000515420 ZNF879B4DU55 563 aa10.59□□□□□ -0.71
CLCN3-210ENST00000515420 SIGLEC5O15389 551 aa10.59□□□□□ -0.71
CLCN3-210ENST00000515420 NDUFB3O43676 98 aa10.59□□□□□ -0.71
CLCN3-210ENST00000515420 WBP4O75554 376 aaKnown RBP10.59□□□□□ -0.71
CLCN3-210ENST00000515420 FCN3O75636 299 aa10.59□□□□□ -0.71
CLCN3-210ENST00000515420 SERPINA3P01011 423 aa10.59□□□□□ -0.71
CLCN3-210ENST00000515420 PGA5P0DJD9 388 aa10.59□□□□□ -0.71
CLCN3-210ENST00000515420 HAAOP46952 286 aa10.59□□□□□ -0.71
CLCN3-210ENST00000515420 CAV3P56539 151 aa10.59□□□□□ -0.71
CLCN3-210ENST00000515420 IL13RA1P78552 427 aa10.59□□□□□ -0.71
CLCN3-210ENST00000515420 LRRC36Q1X8D7 754 aa10.59□□□□□ -0.71
CLCN3-210ENST00000515420 ODF4Q2M2E3 257 aa10.59□□□□□ -0.71
CLCN3-210ENST00000515420 SMIM21Q3B7S5 101 aa10.59□□□□□ -0.71
CLCN3-210ENST00000515420 LRRC10Q5BKY1 277 aa10.59□□□□□ -0.71
CLCN3-210ENST00000515420 OGFRL1Q5TC84 451 aaPredicted RBP10.59□□□□□ -0.71
CLCN3-210ENST00000515420 UTS2BQ765I0 119 aa10.59□□□□□ -0.71
CLCN3-210ENST00000515420 BTN2A1Q7KYR7 527 aa10.59□□□□□ -0.71
CLCN3-210ENST00000515420 PHC2Q8IXK0 858 aa10.59□□□□□ -0.71
CLCN3-210ENST00000515420 DHRSXQ8N5I4 330 aa10.59□□□□□ -0.71
CLCN3-210ENST00000515420 C8orf46Q8TAG6 207 aa10.59□□□□□ -0.71
CLCN3-210ENST00000515420 TMIGD2Q96BF3 282 aa10.59□□□□□ -0.71
CLCN3-210ENST00000515420 CCL13Q99616 98 aa10.59□□□□□ -0.71
CLCN3-210ENST00000515420 ZNF649Q9BS31 505 aa10.59□□□□□ -0.71
CLCN3-210ENST00000515420 DCLRE1BQ9H816 532 aa10.59□□□□□ -0.71
CLCN3-210ENST00000515420 FGF20Q9NP95 211 aaPredicted RBP10.59□□□□□ -0.71
CLCN3-210ENST00000515420 ERVK13-1Q9NX77 482 aa10.59□□□□□ -0.71
CLCN3-210ENST00000515420 FRRS1LQ9P0K9 344 aa10.59□□□□□ -0.71
CLCN3-210ENST00000515420 RPUSD1Q9UJJ7 312 aaKnown RBP10.59□□□□□ -0.71
CLCN3-210ENST00000515420 HHLA2Q9UM44 414 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms