RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 TRAV17A0A0B4J275 112 aa6.48□□□□□ -1.37
CLIP1-205ENST00000514271 A0A1B0GTH9 108 aa6.48□□□□□ -1.37
CLIP1-205ENST00000514271 FRG2CA6NGY1 282 aa6.48□□□□□ -1.37
CLIP1-205ENST00000514271 C17orf105B2RV13 164 aa6.48□□□□□ -1.37
CLIP1-205ENST00000514271 CTSBP07858 339 aa6.48□□□□□ -1.37
CLIP1-205ENST00000514271 DANCRP0C864 163 aa6.48□□□□□ -1.37
CLIP1-205ENST00000514271 EDNRAP25101 427 aa6.48□□□□□ -1.37
CLIP1-205ENST00000514271 S100PP25815 95 aa6.48□□□□□ -1.37
CLIP1-205ENST00000514271 PSMB10P40306 273 aa6.48□□□□□ -1.37
CLIP1-205ENST00000514271 SPOCK1Q08629 439 aa6.48□□□□□ -1.37
CLIP1-205ENST00000514271 PRSS41Q7RTY9 318 aa6.48□□□□□ -1.37
CLIP1-205ENST00000514271 ZNF429Q86V71 674 aa6.48□□□□□ -1.37
CLIP1-205ENST00000514271 TMEM178AQ8NBL3 297 aa6.48□□□□□ -1.37
CLIP1-205ENST00000514271 OR51A7Q8NH64 312 aa6.48□□□□□ -1.37
CLIP1-205ENST00000514271 RNF141Q8WVD5 230 aa6.48□□□□□ -1.37
CLIP1-205ENST00000514271 FAM3DQ96BQ1 224 aa6.48□□□□□ -1.37
CLIP1-205ENST00000514271 NMNAT3Q96T66 252 aa6.48□□□□□ -1.37
CLIP1-205ENST00000514271 RSRP1Q9BUV0 290 aa6.48□□□□□ -1.37
CLIP1-205ENST00000514271 ALG12Q9BV10 488 aa6.48□□□□□ -1.37
CLIP1-205ENST00000514271 Q9N2J8 555 aa6.48□□□□□ -1.37
CLIP1-205ENST00000514271 OBP2BQ9NPH6 170 aa6.48□□□□□ -1.37
CLIP1-205ENST00000514271 OR5AC2Q9NZP5 309 aa6.48□□□□□ -1.37
CLIP1-205ENST00000514271 CEP250Q9BV73 2442 aa6.48□□□□□ -1.37
CLIP1-205ENST00000514271 TRAV34A0A0B4J273 112 aa6.48□□□□□ -1.37
CLIP1-205ENST00000514271 RIIAD1A6NNX1 92 aa6.48□□□□□ -1.37
CLIP1-205ENST00000514271 A8MXE2 369 aa6.48□□□□□ -1.37
CLIP1-205ENST00000514271 H7C2Y5 167 aa6.48□□□□□ -1.37
CLIP1-205ENST00000514271 TP53I11O14683 189 aa6.48□□□□□ -1.37
CLIP1-205ENST00000514271 HCRTR2O43614 444 aa6.48□□□□□ -1.37
CLIP1-205ENST00000514271 WNT2P09544 360 aa6.48□□□□□ -1.37
CLIP1-205ENST00000514271 PAICSP22234 425 aaKnown RBP6.48□□□□□ -1.37
CLIP1-205ENST00000514271 DVL1P1P54792 670 aaPredicted RBP6.48□□□□□ -1.37
CLIP1-205ENST00000514271 SNRPEP62304 92 aaKnown RBP6.48□□□□□ -1.37
CLIP1-205ENST00000514271 TGIF1Q15583 401 aa6.48□□□□□ -1.37
CLIP1-205ENST00000514271 KRTAP27-1Q3LI81 207 aa6.48□□□□□ -1.37
CLIP1-205ENST00000514271 PRAMEF17Q5VTA0 474 aa6.48□□□□□ -1.37
CLIP1-205ENST00000514271 ULK3Q6PHR2 472 aa6.48□□□□□ -1.37
CLIP1-205ENST00000514271 Q6ZPA2 131 aa6.48□□□□□ -1.37
CLIP1-205ENST00000514271 TMEM156Q8N614 296 aa6.48□□□□□ -1.37
CLIP1-205ENST00000514271 CYB561A3Q8NBI2 242 aa6.48□□□□□ -1.37
CLIP1-205ENST00000514271 OR5T3Q8NGG3 340 aa6.48□□□□□ -1.37
CLIP1-205ENST00000514271 OR10G4Q8NGN3 311 aa6.48□□□□□ -1.37
CLIP1-205ENST00000514271 DUSP19Q8WTR2 217 aa6.48□□□□□ -1.37
CLIP1-205ENST00000514271 C5orf34Q96MH7 638 aa6.48□□□□□ -1.37
CLIP1-205ENST00000514271 SELENOIQ9C0D9 397 aa6.48□□□□□ -1.37
CLIP1-205ENST00000514271 FAM206AQ9NX38 181 aa6.48□□□□□ -1.37
CLIP1-205ENST00000514271 H2AFY2Q9P0M6 372 aaPredicted RBP6.48□□□□□ -1.37
CLIP1-205ENST00000514271 PPP4R1LQ9P1A2 415 aa6.48□□□□□ -1.37
CLIP1-205ENST00000514271 GHRLQ9UBU3 117 aa6.48□□□□□ -1.37
CLIP1-205ENST00000514271 KLF13Q9Y2Y9 288 aaPredicted RBP6.48□□□□□ -1.37
CLIP1-205ENST00000514271 TMED3Q9Y3Q3 217 aa6.48□□□□□ -1.37
CLIP1-205ENST00000514271 WDR45Q9Y484 360 aa6.48□□□□□ -1.37
CLIP1-205ENST00000514271 C5orf51A6NDU8 294 aa6.48□□□□□ -1.37
CLIP1-205ENST00000514271 NKX2-8O15522 239 aa6.48□□□□□ -1.37
CLIP1-205ENST00000514271 FGF17O60258 216 aa6.48□□□□□ -1.37
CLIP1-205ENST00000514271 SFTA3P0C7M3 94 aa6.48□□□□□ -1.37
CLIP1-205ENST00000514271 ZNF708P17019 499 aa6.48□□□□□ -1.37
CLIP1-205ENST00000514271 RND2P52198 227 aa6.48□□□□□ -1.37
CLIP1-205ENST00000514271 EFNA3P52797 238 aa6.48□□□□□ -1.37
CLIP1-205ENST00000514271 CAPZA1P52907 286 aa6.48□□□□□ -1.37
CLIP1-205ENST00000514271 ACTBP60709 375 aa6.48□□□□□ -1.37
CLIP1-205ENST00000514271 RAB4BP61018 213 aa6.48□□□□□ -1.37
CLIP1-205ENST00000514271 ACTG1P63261 375 aa6.48□□□□□ -1.37
CLIP1-205ENST00000514271 RASGEF1BQ0VAM2 473 aa6.48□□□□□ -1.37
CLIP1-205ENST00000514271 ANKRD55Q3KP44 614 aa6.48□□□□□ -1.37
CLIP1-205ENST00000514271 SPSB3Q6PJ21 355 aa6.48□□□□□ -1.37
CLIP1-205ENST00000514271 SLC16A14Q7RTX9 510 aa6.48□□□□□ -1.37
CLIP1-205ENST00000514271 COMMD1Q8N668 190 aa6.48□□□□□ -1.37
CLIP1-205ENST00000514271 METTL27Q8N6F8 245 aaPredicted RBP6.48□□□□□ -1.37
CLIP1-205ENST00000514271 OR52L1Q8NGH7 329 aa6.48□□□□□ -1.37
CLIP1-205ENST00000514271 OR52E2Q8NGJ4 325 aa6.48□□□□□ -1.37
CLIP1-205ENST00000514271 PYGO2Q9BRQ0 406 aa6.48□□□□□ -1.37
CLIP1-205ENST00000514271 SMDT1Q9H4I9 107 aa6.48□□□□□ -1.37
CLIP1-205ENST00000514271 RHOFQ9HBH0 211 aa6.48□□□□□ -1.37
CLIP1-205ENST00000514271 A0A1W2PPK0 400 aa6.47□□□□□ -1.37
CLIP1-205ENST00000514271 FTCDNL1E5RQL4 147 aa6.47□□□□□ -1.37
CLIP1-205ENST00000514271 DDAH2O95865 285 aa6.47□□□□□ -1.37
CLIP1-205ENST00000514271 CRYABP02511 175 aaKnown RBP6.47□□□□□ -1.37
CLIP1-205ENST00000514271 ITGA3P26006 1051 aa6.47□□□□□ -1.37
CLIP1-205ENST00000514271 SSR4P51571 173 aa6.47□□□□□ -1.37
CLIP1-205ENST00000514271 CD81P60033 236 aa6.47□□□□□ -1.37
CLIP1-205ENST00000514271 ZNF117Q03924 483 aa6.47□□□□□ -1.37
CLIP1-205ENST00000514271 PMPCAQ10713 525 aa6.47□□□□□ -1.37
CLIP1-205ENST00000514271 SLC17A1Q14916 467 aa6.47□□□□□ -1.37
CLIP1-205ENST00000514271 PLAC9Q5JTB6 97 aa6.47□□□□□ -1.37
CLIP1-205ENST00000514271 KLHL24Q6TFL4 600 aa6.47□□□□□ -1.37
CLIP1-205ENST00000514271 RPS19BP1Q86WX3 136 aaKnown RBP6.47□□□□□ -1.37
CLIP1-205ENST00000514271 ZNF561Q8N587 486 aa6.47□□□□□ -1.37
CLIP1-205ENST00000514271 MEIOBQ8N635 442 aa6.47□□□□□ -1.37
CLIP1-205ENST00000514271 APCDD1LQ8NCL9 501 aa6.47□□□□□ -1.37
CLIP1-205ENST00000514271 SLC25A43Q8WUT9 341 aaPredicted RBP6.47□□□□□ -1.37
CLIP1-205ENST00000514271 THOC3Q96J01 351 aaKnown RBP6.47□□□□□ -1.37
CLIP1-205ENST00000514271 WDR76Q9H967 626 aa6.47□□□□□ -1.37
CLIP1-205ENST00000514271 CDH20Q9HBT6 801 aa6.47□□□□□ -1.37
CLIP1-205ENST00000514271 ZNF160Q9HCG1 818 aa6.47□□□□□ -1.37
CLIP1-205ENST00000514271 GLOD5A6NK44 160 aa6.47□□□□□ -1.37
CLIP1-205ENST00000514271 RNASEK-C17orf49H0YIS7 233 aa6.47□□□□□ -1.37
CLIP1-205ENST00000514271 HTR3BO95264 441 aa6.47□□□□□ -1.37
CLIP1-205ENST00000514271 PGAM2P15259 253 aa6.47□□□□□ -1.37
CLIP1-205ENST00000514271 HIST1H1BP16401 226 aaKnown RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms