RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 FAM90A24PP0C7X0 464 aa7.22□□□□□ -1.25
RNF4-220ENST00000513578 ZNF735P0CB33 412 aa7.22□□□□□ -1.25
RNF4-220ENST00000513578 GTF2F2P13984 249 aa7.22□□□□□ -1.25
RNF4-220ENST00000513578 MGMTP16455 207 aa7.22□□□□□ -1.25
RNF4-220ENST00000513578 CEACAM8P31997 349 aaPredicted RBP7.22□□□□□ -1.25
RNF4-220ENST00000513578 WNT5AP41221 380 aa7.22□□□□□ -1.25
RNF4-220ENST00000513578 CCR6P51684 374 aa7.22□□□□□ -1.25
RNF4-220ENST00000513578 UBE2NP61088 152 aaKnown RBP7.22□□□□□ -1.25
RNF4-220ENST00000513578 CD300CQ08708 224 aa7.22□□□□□ -1.25
RNF4-220ENST00000513578 RBMS2Q15434 407 aaKnown RBP7.22□□□□□ -1.25
RNF4-220ENST00000513578 TBC1D28Q2M2D7 210 aa7.22□□□□□ -1.25
RNF4-220ENST00000513578 C3orf36Q3SXR2 165 aa7.22□□□□□ -1.25
RNF4-220ENST00000513578 LINC00303Q3SY05 128 aa7.22□□□□□ -1.25
RNF4-220ENST00000513578 ACTBL2Q562R1 376 aa7.22□□□□□ -1.25
RNF4-220ENST00000513578 CD276Q5ZPR3 534 aa7.22□□□□□ -1.25
RNF4-220ENST00000513578 SFRP4Q6FHJ7 346 aaPredicted RBP7.22□□□□□ -1.25
RNF4-220ENST00000513578 ZNF585AQ6P3V2 769 aa7.22□□□□□ -1.25
RNF4-220ENST00000513578 VWA1Q6PCB0 445 aa7.22□□□□□ -1.25
RNF4-220ENST00000513578 FAM180AQ6UWF9 173 aa7.22□□□□□ -1.25
RNF4-220ENST00000513578 FBXW12Q6X9E4 464 aa7.22□□□□□ -1.25
RNF4-220ENST00000513578 BEND4Q6ZU67 534 aa7.22□□□□□ -1.25
RNF4-220ENST00000513578 SEM1Q6ZVN7 128 aa7.22□□□□□ -1.25
RNF4-220ENST00000513578 MOB3CQ70IA8 216 aa7.22□□□□□ -1.25
RNF4-220ENST00000513578 MRPL21Q7Z2W9 205 aaKnown RBP7.22□□□□□ -1.25
RNF4-220ENST00000513578 C1QL2Q7Z5L3 287 aa7.22□□□□□ -1.25
RNF4-220ENST00000513578 FJX1Q86VR8 437 aa7.22□□□□□ -1.25
RNF4-220ENST00000513578 TMEM200AQ86VY9 491 aa7.22□□□□□ -1.25
RNF4-220ENST00000513578 LIX1LQ8IVB5 337 aa7.22□□□□□ -1.25
RNF4-220ENST00000513578 TCTE3Q8IZS6 198 aa7.22□□□□□ -1.25
RNF4-220ENST00000513578 WDR31Q8NA23 367 aa7.22□□□□□ -1.25
RNF4-220ENST00000513578 CHST4Q8NCG5 386 aa7.22□□□□□ -1.25
RNF4-220ENST00000513578 SLC30A7Q8NEW0 376 aa7.22□□□□□ -1.25
RNF4-220ENST00000513578 OR5A2Q8NGI9 324 aa7.22□□□□□ -1.25
RNF4-220ENST00000513578 OR5M9Q8NGP3 310 aa7.22□□□□□ -1.25
RNF4-220ENST00000513578 FAM57AQ8TBR7 257 aa7.22□□□□□ -1.25
RNF4-220ENST00000513578 ST8SIA4Q92187 359 aa7.22□□□□□ -1.25
RNF4-220ENST00000513578 STARD4Q96DR4 205 aa7.22□□□□□ -1.25
RNF4-220ENST00000513578 RAB3CQ96E17 227 aa7.22□□□□□ -1.25
RNF4-220ENST00000513578 WBP1Q96G27 269 aa7.22□□□□□ -1.25
RNF4-220ENST00000513578 ABHD17AQ96GS6 310 aa7.22□□□□□ -1.25
RNF4-220ENST00000513578 Q96M66 194 aa7.22□□□□□ -1.25
RNF4-220ENST00000513578 GAL3ST1Q99999 423 aa7.22□□□□□ -1.25
RNF4-220ENST00000513578 SLC25A21Q9BQT8 299 aaPredicted RBP7.22□□□□□ -1.25
RNF4-220ENST00000513578 SELENOIQ9C0D9 397 aa7.22□□□□□ -1.25
RNF4-220ENST00000513578 ZNF71Q9NQZ8 489 aaPredicted RBP7.22□□□□□ -1.25
RNF4-220ENST00000513578 MCUBQ9NWR8 336 aa7.22□□□□□ -1.25
RNF4-220ENST00000513578 MRPL15Q9P015 296 aaKnown RBP7.22□□□□□ -1.25
RNF4-220ENST00000513578 TUBD1Q9UJT1 453 aa7.22□□□□□ -1.25
RNF4-220ENST00000513578 ZNF221Q9UK13 617 aa7.22□□□□□ -1.25
RNF4-220ENST00000513578 PROCRQ9UNN8 238 aa7.22□□□□□ -1.25
RNF4-220ENST00000513578 AMDHD2Q9Y303 409 aa7.22□□□□□ -1.25
RNF4-220ENST00000513578 NOP16Q9Y3C1 178 aaKnown RBP7.22□□□□□ -1.25
RNF4-220ENST00000513578 MPC1Q9Y5U8 109 aa7.22□□□□□ -1.25
RNF4-220ENST00000513578 DOPEY1Q5JWR5 2465 aa7.22□□□□□ -1.25
RNF4-220ENST00000513578 ANKRD17O75179 2603 aaKnown RBP7.21□□□□□ -1.25
RNF4-220ENST00000513578 TRAV6A0A075B6T7 132 aa7.21□□□□□ -1.26
RNF4-220ENST00000513578 PQLC2LA1A4F0 135 aa7.21□□□□□ -1.26
RNF4-220ENST00000513578 TMEM235A6NFC5 223 aa7.21□□□□□ -1.26
RNF4-220ENST00000513578 OR5B21A6NL26 309 aa7.21□□□□□ -1.26
RNF4-220ENST00000513578 CD300LBA8K4G0 201 aa7.21□□□□□ -1.26
RNF4-220ENST00000513578 SNRPGP15A8MWD9 76 aa7.21□□□□□ -1.26
RNF4-220ENST00000513578 ZNF736B4DX44 427 aaPredicted RBP7.21□□□□□ -1.26
RNF4-220ENST00000513578 SOCS1O15524 211 aa7.21□□□□□ -1.26
RNF4-220ENST00000513578 SSX5O60225 188 aa7.21□□□□□ -1.26
RNF4-220ENST00000513578 RAB3DO95716 219 aa7.21□□□□□ -1.26
RNF4-220ENST00000513578 CYB5AP00167 134 aa7.21□□□□□ -1.26
RNF4-220ENST00000513578 NGFP01138 241 aa7.21□□□□□ -1.26
RNF4-220ENST00000513578 IGLV1-44P01699 117 aa7.21□□□□□ -1.26
RNF4-220ENST00000513578 CD3DP04234 171 aa7.21□□□□□ -1.26
RNF4-220ENST00000513578 TMEM225BP0DP42 221 aa7.21□□□□□ -1.26
RNF4-220ENST00000513578 SPINK2P20155 84 aa7.21□□□□□ -1.26
RNF4-220ENST00000513578 EIF2B2P49770 351 aaKnown RBP7.21□□□□□ -1.26
RNF4-220ENST00000513578 TDGF1P3P51864 188 aa7.21□□□□□ -1.26
RNF4-220ENST00000513578 TMPRSS3P57727 454 aa7.21□□□□□ -1.26
RNF4-220ENST00000513578 FOXF2Q12947 444 aa7.21□□□□□ -1.26
RNF4-220ENST00000513578 PDZK1IP1Q13113 114 aa7.21□□□□□ -1.26
RNF4-220ENST00000513578 CARTPTQ16568 116 aa7.21□□□□□ -1.26
RNF4-220ENST00000513578 CEACAM21Q3KPI0 293 aa7.21□□□□□ -1.26
RNF4-220ENST00000513578 SLC22A6Q4U2R8 563 aa7.21□□□□□ -1.26
RNF4-220ENST00000513578 NHLRC3Q5JS37 347 aa7.21□□□□□ -1.26
RNF4-220ENST00000513578 PLAC9Q5JTB6 97 aa7.21□□□□□ -1.26
RNF4-220ENST00000513578 ATAD3CQ5T2N8 411 aa7.21□□□□□ -1.26
RNF4-220ENST00000513578 METTL11BQ5VVY1 283 aa7.21□□□□□ -1.26
RNF4-220ENST00000513578 PLCXD3Q63HM9 321 aa7.21□□□□□ -1.26
RNF4-220ENST00000513578 ELP2Q6IA86 826 aa7.21□□□□□ -1.26
RNF4-220ENST00000513578 UNQ6126/PRO20091Q6UXV3 157 aa7.21□□□□□ -1.26
RNF4-220ENST00000513578 ZDHHC23Q8IYP9 409 aa7.21□□□□□ -1.26
RNF4-220ENST00000513578 GCNT2Q8N0V5 402 aa7.21□□□□□ -1.26
RNF4-220ENST00000513578 CNEP1R1Q8N9A8 125 aa7.21□□□□□ -1.26
RNF4-220ENST00000513578 OR56B2PQ8NGI1 322 aa7.21□□□□□ -1.26
RNF4-220ENST00000513578 OR51T1Q8NGJ9 327 aa7.21□□□□□ -1.26
RNF4-220ENST00000513578 PIGCQ92535 297 aa7.21□□□□□ -1.26
RNF4-220ENST00000513578 NICN1Q9BSH3 213 aa7.21□□□□□ -1.26
RNF4-220ENST00000513578 OR51J1Q9H342 316 aa7.21□□□□□ -1.26
RNF4-220ENST00000513578 BANF2Q9H503 90 aa7.21□□□□□ -1.26
RNF4-220ENST00000513578 RHOFQ9HBH0 211 aa7.21□□□□□ -1.26
RNF4-220ENST00000513578 PTTG3PQ9NZH4 202 aa7.21□□□□□ -1.26
RNF4-220ENST00000513578 MYEF2Q9P2K5 600 aaKnown RBP7.21□□□□□ -1.26
RNF4-220ENST00000513578 EIF3KQ9UBQ5 218 aaKnown RBP7.21□□□□□ -1.26
RNF4-220ENST00000513578 TP53TG5Q9Y2B4 290 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms