RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 GFOD2Q3B7J2 385 aa10.27□□□□□ -0.77
VEGFA-216ENST00000512683 CFHR4Q92496 578 aa10.27□□□□□ -0.77
VEGFA-216ENST00000512683 H1FXQ92522 213 aaKnown RBP10.27□□□□□ -0.77
VEGFA-216ENST00000512683 PPP1R14AQ96A00 147 aa10.27□□□□□ -0.77
VEGFA-216ENST00000512683 SDSLQ96GA7 329 aa10.27□□□□□ -0.77
VEGFA-216ENST00000512683 TEAD3Q99594 435 aa10.27□□□□□ -0.77
VEGFA-216ENST00000512683 FGF23Q9GZV9 251 aaPredicted RBP10.27□□□□□ -0.77
VEGFA-216ENST00000512683 NLKQ9UBE8 527 aa10.27□□□□□ -0.77
VEGFA-216ENST00000512683 CMYA5Q8N3K9 4069 aa10.27□□□□□ -0.77
VEGFA-216ENST00000512683 PRKDCP78527 4128 aaKnown RBP10.27□□□□□ -0.77
VEGFA-216ENST00000512683 A0A1B0GW55 424 aa10.26□□□□□ -0.77
VEGFA-216ENST00000512683 A0A1W2PQ09 198 aa10.26□□□□□ -0.77
VEGFA-216ENST00000512683 CCDC182A6NF36 153 aa10.26□□□□□ -0.77
VEGFA-216ENST00000512683 OR2AT4A6NND4 320 aa10.26□□□□□ -0.77
VEGFA-216ENST00000512683 PRR32B1ATL7 298 aa10.26□□□□□ -0.77
VEGFA-216ENST00000512683 TSPAN15O95858 294 aa10.26□□□□□ -0.77
VEGFA-216ENST00000512683 DUX4L2P0CJ85 424 aa10.26□□□□□ -0.77
VEGFA-216ENST00000512683 DUX4L3P0CJ86 424 aa10.26□□□□□ -0.77
VEGFA-216ENST00000512683 DUX4L4P0CJ87 422 aa10.26□□□□□ -0.77
VEGFA-216ENST00000512683 DUX4L5P0CJ88 424 aa10.26□□□□□ -0.77
VEGFA-216ENST00000512683 DUX4L6P0CJ89 424 aa10.26□□□□□ -0.77
VEGFA-216ENST00000512683 DUX4L7P0CJ90 424 aa10.26□□□□□ -0.77
VEGFA-216ENST00000512683 NDUFB7P17568 137 aa10.26□□□□□ -0.77
VEGFA-216ENST00000512683 DCTDP32321 178 aa10.26□□□□□ -0.77
VEGFA-216ENST00000512683 MAP2K3P46734 347 aa10.26□□□□□ -0.77
VEGFA-216ENST00000512683 EFNB2P52799 333 aa10.26□□□□□ -0.77
VEGFA-216ENST00000512683 PSMA6P60900 246 aaKnown RBP10.26□□□□□ -0.77
VEGFA-216ENST00000512683 GNG3P63215 75 aa10.26□□□□□ -0.77
VEGFA-216ENST00000512683 ELF3P78545 371 aaPredicted RBP10.26□□□□□ -0.77
VEGFA-216ENST00000512683 EFNB1P98172 346 aa10.26□□□□□ -0.77
VEGFA-216ENST00000512683 EMX1Q04741 257 aaPredicted RBP10.26□□□□□ -0.77
VEGFA-216ENST00000512683 PRDX4Q13162 271 aa10.26□□□□□ -0.77
VEGFA-216ENST00000512683 PTGES3Q15185 160 aaKnown RBP10.26□□□□□ -0.77
VEGFA-216ENST00000512683 SNAPC1Q16533 368 aa10.26□□□□□ -0.77
VEGFA-216ENST00000512683 DGUOKQ16854 277 aa10.26□□□□□ -0.77
VEGFA-216ENST00000512683 ZBTB37Q5TC79 503 aa10.26□□□□□ -0.77
VEGFA-216ENST00000512683 LCN1P1Q5VSP4 162 aa10.26□□□□□ -0.77
VEGFA-216ENST00000512683 DUX4L9Q6RFH8 374 aaPredicted RBP10.26□□□□□ -0.77
VEGFA-216ENST00000512683 CALHM1Q8IU99 346 aa10.26□□□□□ -0.77
VEGFA-216ENST00000512683 OR8B12Q8NGG6 310 aa10.26□□□□□ -0.77
VEGFA-216ENST00000512683 OR5A2Q8NGI9 324 aa10.26□□□□□ -0.77
VEGFA-216ENST00000512683 OR51G2Q8NGK0 314 aa10.26□□□□□ -0.77
VEGFA-216ENST00000512683 OR4C13Q8NGP0 309 aa10.26□□□□□ -0.77
VEGFA-216ENST00000512683 OR5K1Q8NHB7 308 aa10.26□□□□□ -0.77
VEGFA-216ENST00000512683 OR2T6Q8NHC8 308 aa10.26□□□□□ -0.77
VEGFA-216ENST00000512683 DNAJC9Q8WXX5 260 aa10.26□□□□□ -0.77
VEGFA-216ENST00000512683 DUS3LQ96G46 650 aaKnown RBP10.26□□□□□ -0.77
VEGFA-216ENST00000512683 GAFA1Q96PS6 74 aa10.26□□□□□ -0.77
VEGFA-216ENST00000512683 SSX3Q99909 188 aa10.26□□□□□ -0.77
VEGFA-216ENST00000512683 PPA2Q9H2U2 334 aa10.26□□□□□ -0.77
VEGFA-216ENST00000512683 PAPOLBQ9NRJ5 636 aaKnown RBP10.26□□□□□ -0.77
VEGFA-216ENST00000512683 TVP23BQ9NYZ1 205 aa10.26□□□□□ -0.77
VEGFA-216ENST00000512683 DUX4Q9UBX2 424 aa10.26□□□□□ -0.77
VEGFA-216ENST00000512683 A0A0U1RQV5 110 aa10.25□□□□□ -0.77
VEGFA-216ENST00000512683 ZNF850A8MQ14 1090 aa10.25□□□□□ -0.77
VEGFA-216ENST00000512683 H0YAE9 185 aa10.25□□□□□ -0.77
VEGFA-216ENST00000512683 PRKYO43930 277 aa10.25□□□□□ -0.77
VEGFA-216ENST00000512683 MITFO75030 526 aaPredicted RBP10.25□□□□□ -0.77
VEGFA-216ENST00000512683 GLRA1P23415 457 aa10.25□□□□□ -0.77
VEGFA-216ENST00000512683 EPHA2P29317 976 aa10.25□□□□□ -0.77
VEGFA-216ENST00000512683 RPS7P62081 194 aaKnown RBP10.25□□□□□ -0.77
VEGFA-216ENST00000512683 LRRC75BQ2VPJ9 315 aa10.25□□□□□ -0.77
VEGFA-216ENST00000512683 CEACAM21Q3KPI0 293 aa10.25□□□□□ -0.77
VEGFA-216ENST00000512683 KCTD8Q6ZWB6 473 aa10.25□□□□□ -0.77
VEGFA-216ENST00000512683 KRT77Q7Z794 578 aa10.25□□□□□ -0.77
VEGFA-216ENST00000512683 ZDHHC23Q8IYP9 409 aa10.25□□□□□ -0.77
VEGFA-216ENST00000512683 FGFRL1Q8N441 504 aa10.25□□□□□ -0.77
VEGFA-216ENST00000512683 OR5T2Q8NGG2 359 aa10.25□□□□□ -0.77
VEGFA-216ENST00000512683 PIGCQ92535 297 aa10.25□□□□□ -0.77
VEGFA-216ENST00000512683 RPL3LQ92901 407 aaKnown RBP10.25□□□□□ -0.77
VEGFA-216ENST00000512683 SEH1LQ96EE3 360 aa10.25□□□□□ -0.77
VEGFA-216ENST00000512683 YIPF3Q9GZM5 350 aa10.25□□□□□ -0.77
VEGFA-216ENST00000512683 NPFFR1Q9GZQ6 430 aa10.25□□□□□ -0.77
VEGFA-216ENST00000512683 WDR13Q9H1Z4 485 aa10.25□□□□□ -0.77
VEGFA-216ENST00000512683 OR51I2Q9H344 312 aa10.25□□□□□ -0.77
VEGFA-216ENST00000512683 LAMP5Q9UJQ1 280 aa10.25□□□□□ -0.77
VEGFA-216ENST00000512683 OR5B21A6NL26 309 aa10.24□□□□□ -0.77
VEGFA-216ENST00000512683 H3BUX3 64 aa10.24□□□□□ -0.77
VEGFA-216ENST00000512683 M0R129 80 aa10.24□□□□□ -0.77
VEGFA-216ENST00000512683 PSMD9O00233 223 aa10.24□□□□□ -0.77
VEGFA-216ENST00000512683 AKR7A2O43488 359 aa10.24□□□□□ -0.77
VEGFA-216ENST00000512683 XPNPEP2O43895 674 aa10.24□□□□□ -0.77
VEGFA-216ENST00000512683 MRPL3P09001 348 aaKnown RBP10.24□□□□□ -0.77
VEGFA-216ENST00000512683 PSG2P11465 335 aa10.24□□□□□ -0.77
VEGFA-216ENST00000512683 GABRA2P47869 451 aa10.24□□□□□ -0.77
VEGFA-216ENST00000512683 ESRRGP62508 458 aa10.24□□□□□ -0.77
VEGFA-216ENST00000512683 ROM1Q03395 351 aa10.24□□□□□ -0.77
VEGFA-216ENST00000512683 ATP6AP1Q15904 470 aa10.24□□□□□ -0.77
VEGFA-216ENST00000512683 BEAN1Q3B7T3 259 aa10.24□□□□□ -0.77
VEGFA-216ENST00000512683 CRIP3Q6Q6R5 217 aa10.24□□□□□ -0.77
VEGFA-216ENST00000512683 BCDIN3DQ7Z5W3 292 aaKnown RBP10.24□□□□□ -0.77
VEGFA-216ENST00000512683 HPSE2Q8WWQ2 592 aa10.24□□□□□ -0.77
VEGFA-216ENST00000512683 TEX12Q9BXU0 123 aa10.24□□□□□ -0.77
VEGFA-216ENST00000512683 SEMA6AQ9H2E6 1030 aa10.24□□□□□ -0.77
VEGFA-216ENST00000512683 SNTG1Q9NSN8 517 aa10.24□□□□□ -0.77
VEGFA-216ENST00000512683 FAM206AQ9NX38 181 aa10.24□□□□□ -0.77
VEGFA-216ENST00000512683 ZNF222Q9UK12 451 aa10.24□□□□□ -0.77
VEGFA-216ENST00000512683 COPS3Q9UNS2 423 aa10.24□□□□□ -0.77
VEGFA-216ENST00000512683 IGKV1D-17A0A075B6S4 117 aa10.23□□□□□ -0.77
VEGFA-216ENST00000512683 VGLL3A8MV65 326 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms