RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 SFXN4Q6P4A7 337 aa5.26□□□□□ -1.57
TRAPPC11-209ENST00000512476 TRIM40Q6P9F5 258 aa5.26□□□□□ -1.57
TRAPPC11-209ENST00000512476 UNQ9370/PRO34162Q6UXP9 181 aa5.26□□□□□ -1.57
TRAPPC11-209ENST00000512476 RASSF6Q6ZTQ3 369 aa5.26□□□□□ -1.57
TRAPPC11-209ENST00000512476 OR5J2Q8NH18 312 aa5.26□□□□□ -1.57
TRAPPC11-209ENST00000512476 HPSE2Q8WWQ2 592 aa5.26□□□□□ -1.57
TRAPPC11-209ENST00000512476 MYEOVQ96EZ4 313 aa5.26□□□□□ -1.57
TRAPPC11-209ENST00000512476 MS4A8Q9BY19 250 aa5.26□□□□□ -1.57
TRAPPC11-209ENST00000512476 RNF167Q9H6Y7 350 aa5.26□□□□□ -1.57
TRAPPC11-209ENST00000512476 GMPR2Q9P2T1 348 aaKnown RBP5.26□□□□□ -1.57
TRAPPC11-209ENST00000512476 OR2W1Q9Y3N9 320 aa5.26□□□□□ -1.57
TRAPPC11-209ENST00000512476 ARID2Q68CP9 1835 aa5.26□□□□□ -1.57
TRAPPC11-209ENST00000512476 LOC285556D6RIA3 1793 aa5.25□□□□□ -1.57
TRAPPC11-209ENST00000512476 RBBP6Q7Z6E9 1792 aaKnown RBP5.25□□□□□ -1.57
TRAPPC11-209ENST00000512476 IGHV2-70DA0A0C4DH43 119 aa5.25□□□□□ -1.57
TRAPPC11-209ENST00000512476 EXOC1LA0A1B0GW35 172 aa5.25□□□□□ -1.57
TRAPPC11-209ENST00000512476 NCBP2LA6PVI3 153 aaKnown RBP5.25□□□□□ -1.57
TRAPPC11-209ENST00000512476 C15orf65H3BRN8 121 aa5.25□□□□□ -1.57
TRAPPC11-209ENST00000512476 FGF17O60258 216 aa5.25□□□□□ -1.57
TRAPPC11-209ENST00000512476 CCDC22O60826 627 aa5.25□□□□□ -1.57
TRAPPC11-209ENST00000512476 DCTN3O75935 186 aa5.25□□□□□ -1.57
TRAPPC11-209ENST00000512476 OR10J4P0C629 311 aa5.25□□□□□ -1.57
TRAPPC11-209ENST00000512476 FOLR1P15328 257 aa5.25□□□□□ -1.57
TRAPPC11-209ENST00000512476 ZFP36P26651 326 aaKnown RBP5.25□□□□□ -1.57
TRAPPC11-209ENST00000512476 OR1D4P47884 311 aa5.25□□□□□ -1.57
TRAPPC11-209ENST00000512476 SULT1A1P50225 295 aa5.25□□□□□ -1.57
TRAPPC11-209ENST00000512476 SULT1A2P50226 295 aa5.25□□□□□ -1.57
TRAPPC11-209ENST00000512476 CDKN2DP55273 166 aa5.25□□□□□ -1.57
TRAPPC11-209ENST00000512476 DOC2BQ14184 412 aa5.25□□□□□ -1.57
TRAPPC11-209ENST00000512476 FAM19A5Q7Z5A7 132 aaPredicted RBP5.25□□□□□ -1.57
TRAPPC11-209ENST00000512476 C10orf107Q8IVU9 208 aa5.25□□□□□ -1.57
TRAPPC11-209ENST00000512476 ZNF564Q8TBZ8 553 aaPredicted RBP5.25□□□□□ -1.57
TRAPPC11-209ENST00000512476 FAM45AQ8TCE6 357 aa5.25□□□□□ -1.57
TRAPPC11-209ENST00000512476 EXTL1Q92935 676 aa5.25□□□□□ -1.57
TRAPPC11-209ENST00000512476 GFM1Q96RP9 751 aaKnown RBP5.25□□□□□ -1.57
TRAPPC11-209ENST00000512476 GGACTQ9BVM4 153 aa5.25□□□□□ -1.57
TRAPPC11-209ENST00000512476 FNDC4Q9H6D8 234 aaPredicted RBP5.25□□□□□ -1.57
TRAPPC11-209ENST00000512476 IL36AQ9UHA7 158 aa5.25□□□□□ -1.57
TRAPPC11-209ENST00000512476 PRO0628Q9UI54 55 aa5.25□□□□□ -1.57
TRAPPC11-209ENST00000512476 FBXL4Q9UKA2 621 aa5.25□□□□□ -1.57
TRAPPC11-209ENST00000512476 NTNG1Q9Y2I2 539 aa5.25□□□□□ -1.57
TRAPPC11-209ENST00000512476 PTPRFP10586 1907 aa5.25□□□□□ -1.57
TRAPPC11-209ENST00000512476 USP27XA6NNY8 438 aa5.25□□□□□ -1.57
TRAPPC11-209ENST00000512476 PRR32B1ATL7 298 aa5.25□□□□□ -1.57
TRAPPC11-209ENST00000512476 LOC110117498-PIK3R3F6TDL0 507 aa5.25□□□□□ -1.57
TRAPPC11-209ENST00000512476 CCL21O00585 134 aa5.25□□□□□ -1.57
TRAPPC11-209ENST00000512476 FAM189A1O60320 539 aa5.25□□□□□ -1.57
TRAPPC11-209ENST00000512476 SLC16A7O60669 478 aa5.25□□□□□ -1.57
TRAPPC11-209ENST00000512476 COX4I1P13073 169 aa5.25□□□□□ -1.57
TRAPPC11-209ENST00000512476 MARK3P27448 753 aa5.25□□□□□ -1.57
TRAPPC11-209ENST00000512476 CASP1P29466 404 aa5.25□□□□□ -1.57
TRAPPC11-209ENST00000512476 FBXW4P57775 412 aa5.25□□□□□ -1.57
TRAPPC11-209ENST00000512476 TPI1P60174 286 aa5.25□□□□□ -1.57
TRAPPC11-209ENST00000512476 CKS1BP61024 79 aa5.25□□□□□ -1.57
TRAPPC11-209ENST00000512476 SLC25A11Q02978 314 aaKnown RBP5.25□□□□□ -1.57
TRAPPC11-209ENST00000512476 SPANXN4Q5MJ08 99 aa5.25□□□□□ -1.57
TRAPPC11-209ENST00000512476 C1orf195Q5TG92 126 aa5.25□□□□□ -1.57
TRAPPC11-209ENST00000512476 LYPD4Q6UWN0 246 aa5.25□□□□□ -1.57
TRAPPC11-209ENST00000512476 CA13Q8N1Q1 262 aa5.25□□□□□ -1.57
TRAPPC11-209ENST00000512476 CADM2Q8N3J6 435 aa5.25□□□□□ -1.57
TRAPPC11-209ENST00000512476 OR13G1Q8NGZ3 307 aa5.25□□□□□ -1.57
TRAPPC11-209ENST00000512476 LNX1Q8TBB1 728 aaPredicted RBP5.25□□□□□ -1.57
TRAPPC11-209ENST00000512476 SEH1LQ96EE3 360 aa5.25□□□□□ -1.57
TRAPPC11-209ENST00000512476 LPAR4Q99677 370 aa5.25□□□□□ -1.57
TRAPPC11-209ENST00000512476 RARRES2Q99969 163 aa5.25□□□□□ -1.57
TRAPPC11-209ENST00000512476 OR51J1Q9H342 316 aa5.25□□□□□ -1.57
TRAPPC11-209ENST00000512476 COL11A1P12107 1806 aaPredicted RBP5.24□□□□□ -1.57
TRAPPC11-209ENST00000512476 OR5H15A6NDH6 313 aa5.24□□□□□ -1.57
TRAPPC11-209ENST00000512476 EI24O14681 340 aa5.24□□□□□ -1.57
TRAPPC11-209ENST00000512476 BUB3O43684 328 aa5.24□□□□□ -1.57
TRAPPC11-209ENST00000512476 OR56A5P0C7T3 313 aa5.24□□□□□ -1.57
TRAPPC11-209ENST00000512476 FAM157CP0CG43 387 aa5.24□□□□□ -1.57
TRAPPC11-209ENST00000512476 SMIM6P0DI80 62 aa5.24□□□□□ -1.57
TRAPPC11-209ENST00000512476 CR2P20023 1033 aa5.24□□□□□ -1.57
TRAPPC11-209ENST00000512476 SAA4P35542 130 aa5.24□□□□□ -1.57
TRAPPC11-209ENST00000512476 OPRL1P41146 370 aa5.24□□□□□ -1.57
TRAPPC11-209ENST00000512476 SERPINB10P48595 397 aa5.24□□□□□ -1.57
TRAPPC11-209ENST00000512476 RIPPLY1Q0D2K3 151 aa5.24□□□□□ -1.57
TRAPPC11-209ENST00000512476 SRSF7Q16629 238 aaKnown RBP eCLIP5.24□□□□□ -1.57
TRAPPC11-209ENST00000512476 LIN52Q52LA3 116 aa5.24□□□□□ -1.57
TRAPPC11-209ENST00000512476 OR2B11Q5JQS5 317 aa5.24□□□□□ -1.57
TRAPPC11-209ENST00000512476 C9orf64Q5T6V5 341 aa5.24□□□□□ -1.57
TRAPPC11-209ENST00000512476 OTUD1Q5VV17 481 aaPredicted RBP5.24□□□□□ -1.57
TRAPPC11-209ENST00000512476 SAMD13Q5VXD3 122 aa5.24□□□□□ -1.57
TRAPPC11-209ENST00000512476 FAM71E1Q6IPT2 247 aa5.24□□□□□ -1.57
TRAPPC11-209ENST00000512476 ANGPTL5Q86XS5 388 aa5.24□□□□□ -1.57
TRAPPC11-209ENST00000512476 UBALD2Q8IYN6 164 aa5.24□□□□□ -1.57
TRAPPC11-209ENST00000512476 OR52N5Q8NH56 324 aa5.24□□□□□ -1.57
TRAPPC11-209ENST00000512476 THAP6Q8TBB0 222 aa5.24□□□□□ -1.57
TRAPPC11-209ENST00000512476 SLC37A2Q8TED4 501 aa5.24□□□□□ -1.57
TRAPPC11-209ENST00000512476 UCN3Q969E3 161 aa5.24□□□□□ -1.57
TRAPPC11-209ENST00000512476 SCMH1Q96GD3 660 aa5.24□□□□□ -1.57
TRAPPC11-209ENST00000512476 TXNIPQ9H3M7 391 aa5.24□□□□□ -1.57
TRAPPC11-209ENST00000512476 ESM1Q9NQ30 184 aa5.24□□□□□ -1.57
TRAPPC11-209ENST00000512476 ING4Q9UNL4 249 aa5.24□□□□□ -1.57
TRAPPC11-209ENST00000512476 A0A0G2JMZ2 1700 aa5.24□□□□□ -1.57
TRAPPC11-209ENST00000512476 A0A1B0GTL3 188 aa5.24□□□□□ -1.57
TRAPPC11-209ENST00000512476 DAPL1A0PJW8 107 aa5.24□□□□□ -1.57
TRAPPC11-209ENST00000512476 PLIN3O60664 434 aa5.24□□□□□ -1.57
TRAPPC11-209ENST00000512476 NXPH3O95157 252 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms