RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 BAG2O95816 211 aa10.98□□□□□ -0.65
RNF4-215ENST00000511843 PPIAL4GP0DN37 164 aa10.98□□□□□ -0.65
RNF4-215ENST00000511843 MMP9P14780 707 aa10.98□□□□□ -0.65
RNF4-215ENST00000511843 GLRA1P23415 457 aa10.98□□□□□ -0.65
RNF4-215ENST00000511843 KIR3DL2P43630 455 aa10.98□□□□□ -0.65
RNF4-215ENST00000511843 MTNR1AP48039 350 aa10.98□□□□□ -0.65
RNF4-215ENST00000511843 DLX1P56177 255 aa10.98□□□□□ -0.65
RNF4-215ENST00000511843 SNRPGP62308 76 aaKnown RBP10.98□□□□□ -0.65
RNF4-215ENST00000511843 CLVS2Q5SYC1 327 aa10.98□□□□□ -0.65
RNF4-215ENST00000511843 TMEM42Q69YG0 159 aa10.98□□□□□ -0.65
RNF4-215ENST00000511843 RBMS3Q6XE24 437 aaKnown RBP10.98□□□□□ -0.65
RNF4-215ENST00000511843 PDZD9Q8IXQ8 264 aa10.98□□□□□ -0.65
RNF4-215ENST00000511843 RDH10Q8IZV5 341 aa10.98□□□□□ -0.65
RNF4-215ENST00000511843 PRSS35Q8N3Z0 413 aa10.98□□□□□ -0.65
RNF4-215ENST00000511843 OR5A2Q8NGI9 324 aa10.98□□□□□ -0.65
RNF4-215ENST00000511843 TRMT10AQ8TBZ6 339 aaKnown RBP10.98□□□□□ -0.65
RNF4-215ENST00000511843 FAM216AQ8WUB2 273 aa10.98□□□□□ -0.65
RNF4-215ENST00000511843 ZFAND2BQ8WV99 257 aa10.98□□□□□ -0.65
RNF4-215ENST00000511843 H1FXQ92522 213 aaKnown RBP10.98□□□□□ -0.65
RNF4-215ENST00000511843 WDFY2Q96P53 400 aa10.98□□□□□ -0.65
RNF4-215ENST00000511843 JMJD8Q96S16 334 aa10.98□□□□□ -0.65
RNF4-215ENST00000511843 C9orf16Q9BUW7 83 aa10.98□□□□□ -0.65
RNF4-215ENST00000511843 SIRPDQ9H106 197 aa10.98□□□□□ -0.65
RNF4-215ENST00000511843 NLKQ9UBE8 527 aa10.98□□□□□ -0.65
RNF4-215ENST00000511843 RPUSD1Q9UJJ7 312 aaKnown RBP10.98□□□□□ -0.65
RNF4-215ENST00000511843 GMPPBQ9Y5P6 360 aa10.98□□□□□ -0.65
RNF4-215ENST00000511843 A0A1B0GVI7 797 aa10.97□□□□□ -0.65
RNF4-215ENST00000511843 PQLC2LA1A4F0 135 aa10.97□□□□□ -0.65
RNF4-215ENST00000511843 NKX6-3A6NJ46 265 aa10.97□□□□□ -0.65
RNF4-215ENST00000511843 NDUFB3O43676 98 aa10.97□□□□□ -0.65
RNF4-215ENST00000511843 GABRB1P18505 474 aa10.97□□□□□ -0.65
RNF4-215ENST00000511843 GABRA2P47869 451 aa10.97□□□□□ -0.65
RNF4-215ENST00000511843 TGM4P49221 684 aa10.97□□□□□ -0.65
RNF4-215ENST00000511843 CEBPDP49716 269 aaPredicted RBP10.97□□□□□ -0.65
RNF4-215ENST00000511843 ISL1P61371 349 aa10.97□□□□□ -0.65
RNF4-215ENST00000511843 BAMBIQ13145 260 aa10.97□□□□□ -0.65
RNF4-215ENST00000511843 TMED1Q13445 227 aa10.97□□□□□ -0.65
RNF4-215ENST00000511843 OCLNQ16625 522 aa10.97□□□□□ -0.65
RNF4-215ENST00000511843 DGUOKQ16854 277 aa10.97□□□□□ -0.65
RNF4-215ENST00000511843 DEFB112Q30KQ8 113 aa10.97□□□□□ -0.65
RNF4-215ENST00000511843 ZBTB37Q5TC79 503 aa10.97□□□□□ -0.65
RNF4-215ENST00000511843 METTL11BQ5VVY1 283 aa10.97□□□□□ -0.65
RNF4-215ENST00000511843 ZNF788Q6ZQV5 615 aa10.97□□□□□ -0.65
RNF4-215ENST00000511843 ZBTB49Q6ZSB9 765 aa10.97□□□□□ -0.65
RNF4-215ENST00000511843 SLC36A1Q7Z2H8 476 aa10.97□□□□□ -0.65
RNF4-215ENST00000511843 ENTHD1Q8IYW4 607 aa10.97□□□□□ -0.65
RNF4-215ENST00000511843 PNLDC1Q8NA58 520 aaKnown RBP10.97□□□□□ -0.65
RNF4-215ENST00000511843 ANGPTL6Q8NI99 470 aa10.97□□□□□ -0.65
RNF4-215ENST00000511843 TRUB1Q8WWH5 349 aaKnown RBP10.97□□□□□ -0.65
RNF4-215ENST00000511843 LHX4Q969G2 390 aa10.97□□□□□ -0.65
RNF4-215ENST00000511843 TMIGD2Q96BF3 282 aa10.97□□□□□ -0.65
RNF4-215ENST00000511843 C12orf43Q96C57 262 aaKnown RBP10.97□□□□□ -0.65
RNF4-215ENST00000511843 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.97□□□□□ -0.65
RNF4-215ENST00000511843 ONECUT1Q9UBC0 465 aa10.97□□□□□ -0.65
RNF4-215ENST00000511843 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.97□□□□□ -0.65
RNF4-215ENST00000511843 DSCAML1Q8TD84 2053 aa10.96□□□□□ -0.65
RNF4-215ENST00000511843 CENPVL3A0A0U1RRI6 287 aa10.96□□□□□ -0.65
RNF4-215ENST00000511843 LOC107986453A0A1B0GWG9 222 aa10.96□□□□□ -0.65
RNF4-215ENST00000511843 FAM230AA0A1W2PPH8 454 aa10.96□□□□□ -0.65
RNF4-215ENST00000511843 DAPL1A0PJW8 107 aa10.96□□□□□ -0.65
RNF4-215ENST00000511843 J3QRE1 110 aa10.96□□□□□ -0.65
RNF4-215ENST00000511843 DLGAP1O14490 977 aa10.96□□□□□ -0.65
RNF4-215ENST00000511843 SYT7O43581 403 aa10.96□□□□□ -0.65
RNF4-215ENST00000511843 SULT1C4O75897 302 aa10.96□□□□□ -0.65
RNF4-215ENST00000511843 PSG2P11465 335 aa10.96□□□□□ -0.65
RNF4-215ENST00000511843 CCL1P22362 96 aa10.96□□□□□ -0.65
RNF4-215ENST00000511843 HAAOP46952 286 aa10.96□□□□□ -0.65
RNF4-215ENST00000511843 OR12D2P58182 307 aa10.96□□□□□ -0.65
RNF4-215ENST00000511843 ZNF91Q05481 1191 aa10.96□□□□□ -0.65
RNF4-215ENST00000511843 ATPAF1Q5TC12 328 aaPredicted RBP10.96□□□□□ -0.65
RNF4-215ENST00000511843 GPR157Q5UAW9 335 aa10.96□□□□□ -0.65
RNF4-215ENST00000511843 C12orf54Q6X4T0 127 aa10.96□□□□□ -0.65
RNF4-215ENST00000511843 Q6ZSR3 168 aa10.96□□□□□ -0.65
RNF4-215ENST00000511843 FAM220AQ7Z4H9 259 aa10.96□□□□□ -0.65
RNF4-215ENST00000511843 ANGPTL5Q86XS5 388 aa10.96□□□□□ -0.65
RNF4-215ENST00000511843 CALHM1Q8IU99 346 aa10.96□□□□□ -0.65
RNF4-215ENST00000511843 ZNRF1Q8ND25 227 aa10.96□□□□□ -0.65
RNF4-215ENST00000511843 GCDHQ92947 438 aaPredicted RBP10.96□□□□□ -0.65
RNF4-215ENST00000511843 LGALS12Q96DT0 336 aa10.96□□□□□ -0.65
RNF4-215ENST00000511843 AMBNQ9NP70 447 aa10.96□□□□□ -0.65
RNF4-215ENST00000511843 TNFRSF19Q9NS68 423 aa10.96□□□□□ -0.65
RNF4-215ENST00000511843 SLC25A10Q9UBX3 287 aaPredicted RBP10.96□□□□□ -0.65
RNF4-215ENST00000511843 ANKRD61A6NGH8 418 aa10.95□□□□□ -0.66
RNF4-215ENST00000511843 J3QT63 122 aa10.95□□□□□ -0.66
RNF4-215ENST00000511843 HAX1O00165 279 aa10.95□□□□□ -0.66
RNF4-215ENST00000511843 SIGLEC5O15389 551 aa10.95□□□□□ -0.66
RNF4-215ENST00000511843 INMTO95050 263 aa10.95□□□□□ -0.66
RNF4-215ENST00000511843 LIPFP07098 398 aa10.95□□□□□ -0.66
RNF4-215ENST00000511843 ACAA1P09110 424 aaPredicted RBP10.95□□□□□ -0.66
RNF4-215ENST00000511843 DBTP11182 482 aaKnown RBP10.95□□□□□ -0.66
RNF4-215ENST00000511843 NDUFB7P17568 137 aa10.95□□□□□ -0.66
RNF4-215ENST00000511843 PRTN3P24158 256 aa10.95□□□□□ -0.66
RNF4-215ENST00000511843 NANOS3P60323 173 aaKnown RBP10.95□□□□□ -0.66
RNF4-215ENST00000511843 IL13RA1P78552 427 aa10.95□□□□□ -0.66
RNF4-215ENST00000511843 KLRD1Q13241 179 aa10.95□□□□□ -0.66
RNF4-215ENST00000511843 SLC9A3R2Q15599 337 aa10.95□□□□□ -0.66
RNF4-215ENST00000511843 UBE2V2Q15819 145 aa10.95□□□□□ -0.66
RNF4-215ENST00000511843 LRRC36Q1X8D7 754 aa10.95□□□□□ -0.66
RNF4-215ENST00000511843 CDONQ4KMG0 1287 aa10.95□□□□□ -0.66
RNF4-215ENST00000511843 LRRC10Q5BKY1 277 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms