RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 KIR3DL2P43630 455 aa13.37□□□□□ -0.27
PDLIM5-212ENST00000509333 GMFBP60983 142 aa13.37□□□□□ -0.27
PDLIM5-212ENST00000509333 ACTC1P68032 377 aa13.37□□□□□ -0.27
PDLIM5-212ENST00000509333 ACTA1P68133 377 aa13.37□□□□□ -0.27
PDLIM5-212ENST00000509333 ZSCAN26Q16670 478 aa13.37□□□□□ -0.27
PDLIM5-212ENST00000509333 PLCXD3Q63HM9 321 aa13.37□□□□□ -0.27
PDLIM5-212ENST00000509333 LPCAT4Q643R3 524 aa13.37□□□□□ -0.27
PDLIM5-212ENST00000509333 STUMQ69YW2 141 aa13.37□□□□□ -0.27
PDLIM5-212ENST00000509333 DUX4L9Q6RFH8 374 aaPredicted RBP13.37□□□□□ -0.27
PDLIM5-212ENST00000509333 ZNF788Q6ZQV5 615 aa13.37□□□□□ -0.27
PDLIM5-212ENST00000509333 LHFPL3Q86UP9 236 aa13.37□□□□□ -0.27
PDLIM5-212ENST00000509333 BCL6BQ8N143 479 aaPredicted RBP13.37□□□□□ -0.27
PDLIM5-212ENST00000509333 FGFRL1Q8N441 504 aa13.37□□□□□ -0.27
PDLIM5-212ENST00000509333 CCDC54Q8NEL0 328 aa13.37□□□□□ -0.27
PDLIM5-212ENST00000509333 ANGPTL6Q8NI99 470 aa13.37□□□□□ -0.27
PDLIM5-212ENST00000509333 ZNF418Q8TF45 676 aaPredicted RBP13.37□□□□□ -0.27
PDLIM5-212ENST00000509333 APH1BQ8WW43 257 aa13.37□□□□□ -0.27
PDLIM5-212ENST00000509333 C22orf15Q8WYQ4 148 aa13.37□□□□□ -0.27
PDLIM5-212ENST00000509333 ADI1Q9BV57 179 aa13.37□□□□□ -0.27
PDLIM5-212ENST00000509333 SNTG1Q9NSN8 517 aa13.37□□□□□ -0.27
PDLIM5-212ENST00000509333 ACOXLQ9NUZ1 547 aa13.37□□□□□ -0.27
PDLIM5-212ENST00000509333 SMPD3Q9NY59 655 aaPredicted RBP13.37□□□□□ -0.27
PDLIM5-212ENST00000509333 DUX4Q9UBX2 424 aa13.37□□□□□ -0.27
PDLIM5-212ENST00000509333 A0A1B0GVI7 797 aa13.36□□□□□ -0.27
PDLIM5-212ENST00000509333 PQLC2LA1A4F0 135 aa13.36□□□□□ -0.27
PDLIM5-212ENST00000509333 J3QLW9 94 aa13.36□□□□□ -0.27
PDLIM5-212ENST00000509333 ENSAO43768 121 aaKnown RBP13.36□□□□□ -0.27
PDLIM5-212ENST00000509333 NOS1APO75052 506 aaPredicted RBP13.36□□□□□ -0.27
PDLIM5-212ENST00000509333 WBP4O75554 376 aaKnown RBP13.36□□□□□ -0.27
PDLIM5-212ENST00000509333 DBTP11182 482 aaKnown RBP13.36□□□□□ -0.27
PDLIM5-212ENST00000509333 ZNF19P17023 458 aa13.36□□□□□ -0.27
PDLIM5-212ENST00000509333 NANOS3P60323 173 aaKnown RBP13.36□□□□□ -0.27
PDLIM5-212ENST00000509333 ZNF91Q05481 1191 aa13.36□□□□□ -0.27
PDLIM5-212ENST00000509333 UBE2V2Q15819 145 aa13.36□□□□□ -0.27
PDLIM5-212ENST00000509333 LRRC36Q1X8D7 754 aa13.36□□□□□ -0.27
PDLIM5-212ENST00000509333 HAGHLQ6PII5 290 aaPredicted RBP13.36□□□□□ -0.27
PDLIM5-212ENST00000509333 BTN2A1Q7KYR7 527 aa13.36□□□□□ -0.27
PDLIM5-212ENST00000509333 SLC36A1Q7Z2H8 476 aa13.36□□□□□ -0.27
PDLIM5-212ENST00000509333 ZNF573Q86YE8 665 aa13.36□□□□□ -0.27
PDLIM5-212ENST00000509333 TECTBQ96PL2 329 aa13.36□□□□□ -0.27
PDLIM5-212ENST00000509333 C19orf24Q9BVV8 132 aa13.36□□□□□ -0.27
PDLIM5-212ENST00000509333 DNTTIP1Q9H147 329 aa13.36□□□□□ -0.27
PDLIM5-212ENST00000509333 RASL12Q9NYN1 266 aa13.36□□□□□ -0.27
PDLIM5-212ENST00000509333 SOX21Q9Y651 276 aaPredicted RBP13.36□□□□□ -0.27
PDLIM5-212ENST00000509333 H3BSH0 61 aa13.35□□□□□ -0.27
PDLIM5-212ENST00000509333 SYNGR1O43759 233 aa13.35□□□□□ -0.27
PDLIM5-212ENST00000509333 RGS9O75916 674 aaPredicted RBP13.35□□□□□ -0.27
PDLIM5-212ENST00000509333 FADS2O95864 444 aaKnown RBP13.35□□□□□ -0.27
PDLIM5-212ENST00000509333 IGHA1P01876 353 aa13.35□□□□□ -0.27
PDLIM5-212ENST00000509333 ISG15P05161 165 aa13.35□□□□□ -0.27
PDLIM5-212ENST00000509333 ACAA1P09110 424 aaPredicted RBP13.35□□□□□ -0.27
PDLIM5-212ENST00000509333 IGHV4-38-2P0DP08 117 aa13.35□□□□□ -0.27
PDLIM5-212ENST00000509333 PSG2P11465 335 aa13.35□□□□□ -0.27
PDLIM5-212ENST00000509333 GLRA1P23415 457 aa13.35□□□□□ -0.27
PDLIM5-212ENST00000509333 CCR9P51686 369 aa13.35□□□□□ -0.27
PDLIM5-212ENST00000509333 HILS1P60008 231 aa13.35□□□□□ -0.27
PDLIM5-212ENST00000509333 FGF12P61328 243 aa13.35□□□□□ -0.27
PDLIM5-212ENST00000509333 GALEQ14376 348 aa13.35□□□□□ -0.27
PDLIM5-212ENST00000509333 TMEM244Q5VVB8 128 aa13.35□□□□□ -0.27
PDLIM5-212ENST00000509333 LY6G5BQ8NDX9 201 aa13.35□□□□□ -0.27
PDLIM5-212ENST00000509333 ZNF555Q8NEP9 628 aa13.35□□□□□ -0.27
PDLIM5-212ENST00000509333 OR52I1Q8NGK6 324 aa13.35□□□□□ -0.27
PDLIM5-212ENST00000509333 PELI1Q96FA3 418 aa13.35□□□□□ -0.27
PDLIM5-212ENST00000509333 SLC6A7Q99884 636 aa13.35□□□□□ -0.27
PDLIM5-212ENST00000509333 CNTD2Q9H8S5 307 aa13.35□□□□□ -0.27
PDLIM5-212ENST00000509333 ISG20L2Q9H9L3 353 aaKnown RBP13.35□□□□□ -0.27
PDLIM5-212ENST00000509333 ERVK13-1Q9NX77 482 aa13.35□□□□□ -0.27
PDLIM5-212ENST00000509333 DNAJB11Q9UBS4 358 aa13.35□□□□□ -0.27
PDLIM5-212ENST00000509333 RPL36Q9Y3U8 105 aaKnown RBP13.35□□□□□ -0.27
PDLIM5-212ENST00000509333 MAB21L2Q9Y586 359 aa13.35□□□□□ -0.27
PDLIM5-212ENST00000509333 IGKV1D-17A0A075B6S4 117 aa13.34□□□□□ -0.27
PDLIM5-212ENST00000509333 ANKRD61A6NGH8 418 aa13.34□□□□□ -0.27
PDLIM5-212ENST00000509333 OR4C45A6NMZ5 311 aa13.34□□□□□ -0.27
PDLIM5-212ENST00000509333 OR2AT4A6NND4 320 aa13.34□□□□□ -0.27
PDLIM5-212ENST00000509333 ZNF879B4DU55 563 aa13.34□□□□□ -0.27
PDLIM5-212ENST00000509333 GPR37O15354 613 aa13.34□□□□□ -0.27
PDLIM5-212ENST00000509333 NDUFB3O43676 98 aa13.34□□□□□ -0.27
PDLIM5-212ENST00000509333 CLIC3O95833 236 aa13.34□□□□□ -0.27
PDLIM5-212ENST00000509333 PLATP00750 562 aa13.34□□□□□ -0.27
PDLIM5-212ENST00000509333 TFF1P04155 84 aa13.34□□□□□ -0.27
PDLIM5-212ENST00000509333 MMP9P14780 707 aa13.34□□□□□ -0.27
PDLIM5-212ENST00000509333 HAAOP46952 286 aa13.34□□□□□ -0.27
PDLIM5-212ENST00000509333 ADARB1P78563 741 aaKnown RBP13.34□□□□□ -0.27
PDLIM5-212ENST00000509333 RAB40BQ12829 278 aa13.34□□□□□ -0.27
PDLIM5-212ENST00000509333 RCN1Q15293 331 aa13.34□□□□□ -0.27
PDLIM5-212ENST00000509333 SMN1Q16637 294 aaKnown RBP13.34□□□□□ -0.27
PDLIM5-212ENST00000509333 KLHL22Q53GT1 634 aa13.34□□□□□ -0.27
PDLIM5-212ENST00000509333 ARMCX4Q5H9R4 360 aa13.34□□□□□ -0.27
PDLIM5-212ENST00000509333 TTC23Q5W5X9 447 aa13.34□□□□□ -0.27
PDLIM5-212ENST00000509333 FAM220AQ7Z4H9 259 aa13.34□□□□□ -0.27
PDLIM5-212ENST00000509333 ANGPTL5Q86XS5 388 aa13.34□□□□□ -0.27
PDLIM5-212ENST00000509333 BPIFB2Q8N4F0 458 aa13.34□□□□□ -0.27
PDLIM5-212ENST00000509333 PACRGLQ8N7B6 248 aa13.34□□□□□ -0.27
PDLIM5-212ENST00000509333 FAM216BQ8N7L0 139 aa13.34□□□□□ -0.27
PDLIM5-212ENST00000509333 ZDHHC22Q8N966 263 aa13.34□□□□□ -0.27
PDLIM5-212ENST00000509333 PNLDC1Q8NA58 520 aaKnown RBP13.34□□□□□ -0.27
PDLIM5-212ENST00000509333 ZFAND2BQ8WV99 257 aa13.34□□□□□ -0.27
PDLIM5-212ENST00000509333 TMIGD2Q96BF3 282 aa13.34□□□□□ -0.27
PDLIM5-212ENST00000509333 C10orf35Q96D05 121 aa13.34□□□□□ -0.27
PDLIM5-212ENST00000509333 MED30Q96HR3 178 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms