RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 OR1K1Q8NGR3 316 aa8.02□□□□□ -1.13
HTT-205ENST00000509043 OR2AE1Q8NHA4 323 aa8.02□□□□□ -1.13
HTT-205ENST00000509043 LILRB4Q8NHJ6 448 aa8.02□□□□□ -1.13
HTT-205ENST00000509043 FBXW5Q969U6 566 aa8.02□□□□□ -1.13
HTT-205ENST00000509043 SARAFQ96BY9 339 aa8.02□□□□□ -1.13
HTT-205ENST00000509043 PHB2Q99623 299 aa8.02□□□□□ -1.13
HTT-205ENST00000509043 DHRS9Q9BPW9 319 aa8.02□□□□□ -1.13
HTT-205ENST00000509043 ELL3Q9HB65 397 aaPredicted RBP8.02□□□□□ -1.13
HTT-205ENST00000509043 RHOFQ9HBH0 211 aa8.02□□□□□ -1.13
HTT-205ENST00000509043 PIPOXQ9P0Z9 390 aa8.02□□□□□ -1.13
HTT-205ENST00000509043 SHPKQ9UHJ6 478 aa8.02□□□□□ -1.13
HTT-205ENST00000509043 OPN4Q9UHM6 478 aa8.02□□□□□ -1.13
HTT-205ENST00000509043 NOP16Q9Y3C1 178 aaKnown RBP8.02□□□□□ -1.13
HTT-205ENST00000509043 COL6A3P12111 3177 aa8.02□□□□□ -1.13
HTT-205ENST00000509043 FAM230AA0A1W2PPH8 454 aa8.01□□□□□ -1.13
HTT-205ENST00000509043 PLSCR5A0PG75 271 aa8.01□□□□□ -1.13
HTT-205ENST00000509043 SMLR1H3BR10 107 aa8.01□□□□□ -1.13
HTT-205ENST00000509043 NKX2-8O15522 239 aa8.01□□□□□ -1.13
HTT-205ENST00000509043 DUS4LO95620 317 aaKnown RBP8.01□□□□□ -1.13
HTT-205ENST00000509043 IFNA7P01567 189 aa8.01□□□□□ -1.13
HTT-205ENST00000509043 HLA-AP01891 365 aaKnown RBP8.01□□□□□ -1.13
HTT-205ENST00000509043 EDN3P14138 238 aa8.01□□□□□ -1.13
HTT-205ENST00000509043 AMY2BP19961 511 aa8.01□□□□□ -1.13
HTT-205ENST00000509043 TUBG1P23258 451 aa8.01□□□□□ -1.13
HTT-205ENST00000509043 ANOS1P23352 680 aa8.01□□□□□ -1.13
HTT-205ENST00000509043 ZBTB25P24278 435 aa8.01□□□□□ -1.13
HTT-205ENST00000509043 FPR2P25090 351 aa8.01□□□□□ -1.13
HTT-205ENST00000509043 CD34P28906 385 aa8.01□□□□□ -1.13
HTT-205ENST00000509043 APLNRP35414 380 aa8.01□□□□□ -1.13
HTT-205ENST00000509043 OR3A3P47888 321 aa8.01□□□□□ -1.13
HTT-205ENST00000509043 TSPAN5P62079 268 aa8.01□□□□□ -1.13
HTT-205ENST00000509043 RAB1AP62820 205 aa8.01□□□□□ -1.13
HTT-205ENST00000509043 PDZK1IP1Q13113 114 aa8.01□□□□□ -1.13
HTT-205ENST00000509043 DHRS2Q13268 280 aa8.01□□□□□ -1.13
HTT-205ENST00000509043 CLN3Q13286 438 aa8.01□□□□□ -1.13
HTT-205ENST00000509043 NHLRC3Q5JS37 347 aa8.01□□□□□ -1.13
HTT-205ENST00000509043 ATP1A1-AS1Q5TC04 95 aa8.01□□□□□ -1.13
HTT-205ENST00000509043 PLCXD3Q63HM9 321 aa8.01□□□□□ -1.13
HTT-205ENST00000509043 ELP2Q6IA86 826 aa8.01□□□□□ -1.13
HTT-205ENST00000509043 C11orf88Q6PI97 169 aa8.01□□□□□ -1.13
HTT-205ENST00000509043 IGFL3Q6UXB1 125 aa8.01□□□□□ -1.13
HTT-205ENST00000509043 MRPL21Q7Z2W9 205 aaKnown RBP8.01□□□□□ -1.13
HTT-205ENST00000509043 P4HA3Q7Z4N8 544 aa8.01□□□□□ -1.13
HTT-205ENST00000509043 C1QL2Q7Z5L3 287 aa8.01□□□□□ -1.13
HTT-205ENST00000509043 TMED4Q7Z7H5 227 aa8.01□□□□□ -1.13
HTT-205ENST00000509043 LINC00596Q86U02 117 aa8.01□□□□□ -1.13
HTT-205ENST00000509043 CD163Q86VB7 1156 aa8.01□□□□□ -1.13
HTT-205ENST00000509043 TMEM200AQ86VY9 491 aa8.01□□□□□ -1.13
HTT-205ENST00000509043 OSR2Q8N2R0 312 aa8.01□□□□□ -1.13
HTT-205ENST00000509043 GVQW1Q8N7I0 195 aa8.01□□□□□ -1.13
HTT-205ENST00000509043 FDCSPQ8NFU4 85 aa8.01□□□□□ -1.13
HTT-205ENST00000509043 OR4S1Q8NGB4 309 aa8.01□□□□□ -1.13
HTT-205ENST00000509043 OR11H4Q8NGC9 324 aa8.01□□□□□ -1.13
HTT-205ENST00000509043 OR5AP2Q8NGF4 316 aa8.01□□□□□ -1.13
HTT-205ENST00000509043 OR5M8Q8NGP6 311 aa8.01□□□□□ -1.13
HTT-205ENST00000509043 FGFBP3Q8TAT2 258 aa8.01□□□□□ -1.13
HTT-205ENST00000509043 NPRL2Q8WTW4 380 aa8.01□□□□□ -1.13
HTT-205ENST00000509043 MITD1Q8WV92 249 aa8.01□□□□□ -1.13
HTT-205ENST00000509043 BCL2L2Q92843 193 aaPredicted RBP8.01□□□□□ -1.13
HTT-205ENST00000509043 MS4A3Q96HJ5 214 aa8.01□□□□□ -1.13
HTT-205ENST00000509043 POM121L2Q96KW2 1035 aa8.01□□□□□ -1.13
HTT-205ENST00000509043 DEFB127Q9H1M4 99 aa8.01□□□□□ -1.13
HTT-205ENST00000509043 PLK3Q9H4B4 646 aa8.01□□□□□ -1.13
HTT-205ENST00000509043 TUBG2Q9NRH3 451 aa8.01□□□□□ -1.13
HTT-205ENST00000509043 PLEKHJ1Q9NW61 149 aa8.01□□□□□ -1.13
HTT-205ENST00000509043 SPRR3Q9UBC9 169 aa8.01□□□□□ -1.13
HTT-205ENST00000509043 CLCF1Q9UBD9 225 aa8.01□□□□□ -1.13
HTT-205ENST00000509043 ELF5Q9UKW6 265 aaPredicted RBP8.01□□□□□ -1.13
HTT-205ENST00000509043 BOLA1Q9Y3E2 137 aa8.01□□□□□ -1.13
HTT-205ENST00000509043 MPC1Q9Y5U8 109 aa8.01□□□□□ -1.13
HTT-205ENST00000509043 NCOA6Q14686 2063 aaPredicted RBP8□□□□□ -1.13
HTT-205ENST00000509043 LOC100509620A0A075B734 347 aa8□□□□□ -1.13
HTT-205ENST00000509043 PQLC2LA1A4F0 135 aa8□□□□□ -1.13
HTT-205ENST00000509043 C5orf49A4QMS7 147 aa8□□□□□ -1.13
HTT-205ENST00000509043 TUBAL3A6NHL2 446 aa8□□□□□ -1.13
HTT-205ENST00000509043 POM121CA8CG34 1229 aa8□□□□□ -1.13
HTT-205ENST00000509043 AHRRA9YTQ3 701 aa8□□□□□ -1.13
HTT-205ENST00000509043 G3V3Q6 166 aa8□□□□□ -1.13
HTT-205ENST00000509043 M0R233 179 aa8□□□□□ -1.13
HTT-205ENST00000509043 HTR3BO95264 441 aa8□□□□□ -1.13
HTT-205ENST00000509043 CD8AP01732 235 aa8□□□□□ -1.13
HTT-205ENST00000509043 IGHV3-9P01782 118 aa8□□□□□ -1.13
HTT-205ENST00000509043 HLA-HP01893 362 aa8□□□□□ -1.13
HTT-205ENST00000509043 PATE4P0C8F1 98 aa8□□□□□ -1.13
HTT-205ENST00000509043 CD79AP11912 226 aa8□□□□□ -1.13
HTT-205ENST00000509043 NFYAP23511 347 aaPredicted RBP8□□□□□ -1.13
HTT-205ENST00000509043 CCL11P51671 97 aa8□□□□□ -1.13
HTT-205ENST00000509043 SNU13P55769 128 aaKnown RBP8□□□□□ -1.13
HTT-205ENST00000509043 PER3P56645 1201 aa8□□□□□ -1.13
HTT-205ENST00000509043 CYCSP99999 105 aaKnown RBP8□□□□□ -1.13
HTT-205ENST00000509043 SRSF7Q16629 238 aaKnown RBP eCLIP8□□□□□ -1.13
HTT-205ENST00000509043 NKPD1Q17RQ9 610 aa8□□□□□ -1.13
HTT-205ENST00000509043 MICBQ29980 383 aa8□□□□□ -1.13
HTT-205ENST00000509043 EIF2S3LQ2VIR3 472 aaKnown RBP8□□□□□ -1.13
HTT-205ENST00000509043 CEACAM21Q3KPI0 293 aa8□□□□□ -1.13
HTT-205ENST00000509043 LGALSLQ3ZCW2 172 aaPredicted RBP8□□□□□ -1.13
HTT-205ENST00000509043 PLEKHN1Q494U1 663 aaPredicted RBP8□□□□□ -1.13
HTT-205ENST00000509043 CHRFAM7AQ494W8 412 aa8□□□□□ -1.13
HTT-205ENST00000509043 TMEM128Q5BJH2 165 aa8□□□□□ -1.13
HTT-205ENST00000509043 Q5BKY6 102 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms