RNA–Protein interactions for RNA: ENST00000508756.2

CHD1-205, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-205ENST00000508756 PON2Q15165 354 aa3.57□□□□□ -1.84
CHD1-205ENST00000508756 RBMY1FQ15415 496 aaKnown RBP3.57□□□□□ -1.84
CHD1-205ENST00000508756 PRR9Q5T870 116 aa3.57□□□□□ -1.84
CHD1-205ENST00000508756 FBXW12Q6X9E4 464 aa3.57□□□□□ -1.84
CHD1-205ENST00000508756 TMEM25Q86YD3 366 aa3.57□□□□□ -1.84
CHD1-205ENST00000508756 FUNDC1Q8IVP5 155 aa3.57□□□□□ -1.84
CHD1-205ENST00000508756 RNASEH2CQ8TDP1 164 aaKnown RBP3.57□□□□□ -1.84
CHD1-205ENST00000508756 MYO3BQ8WXR4 1341 aa3.57□□□□□ -1.84
CHD1-205ENST00000508756 ZNF396Q96N95 335 aaPredicted RBP3.57□□□□□ -1.84
CHD1-205ENST00000508756 RBBP8Q99708 897 aa3.57□□□□□ -1.84
CHD1-205ENST00000508756 ANGPTL4Q9BY76 406 aa3.57□□□□□ -1.84
CHD1-205ENST00000508756 PARP12Q9H0J9 701 aaKnown RBP3.57□□□□□ -1.84
CHD1-205ENST00000508756 SAV1Q9H4B6 383 aaPredicted RBP3.57□□□□□ -1.84
CHD1-205ENST00000508756 ACOT13Q9NPJ3 140 aa3.57□□□□□ -1.84
CHD1-205ENST00000508756 COL27A1Q8IZC6 1860 aaPredicted RBP3.56□□□□□ -1.84
CHD1-205ENST00000508756 LRPPRCP42704 1394 aaKnown RBP3.56□□□□□ -1.84
CHD1-205ENST00000508756 ISPDA4D126 451 aa3.56□□□□□ -1.84
CHD1-205ENST00000508756 ITGB1BP1O14713 200 aa3.56□□□□□ -1.84
CHD1-205ENST00000508756 AQP9O43315 295 aa3.56□□□□□ -1.84
CHD1-205ENST00000508756 COCHO43405 550 aa3.56□□□□□ -1.84
CHD1-205ENST00000508756 CTNSO60931 367 aa3.56□□□□□ -1.84
CHD1-205ENST00000508756 OR56A5P0C7T3 313 aa3.56□□□□□ -1.84
CHD1-205ENST00000508756 GFAPP14136 432 aa3.56□□□□□ -1.84
CHD1-205ENST00000508756 CD70P32970 193 aa3.56□□□□□ -1.84
CHD1-205ENST00000508756 DNASE1L1P49184 302 aa3.56□□□□□ -1.84
CHD1-205ENST00000508756 AQP5P55064 265 aa3.56□□□□□ -1.84
CHD1-205ENST00000508756 OR2B8PP59922 312 aa3.56□□□□□ -1.84
CHD1-205ENST00000508756 PRR3P79522 188 aaKnown RBP3.56□□□□□ -1.84
CHD1-205ENST00000508756 PRKCDQ05655 676 aa3.56□□□□□ -1.84
CHD1-205ENST00000508756 CDKL4Q5MAI5 379 aa3.56□□□□□ -1.84
CHD1-205ENST00000508756 METTL21CQ5VZV1 264 aa3.56□□□□□ -1.84
CHD1-205ENST00000508756 RESP18Q5W5W9 173 aa3.56□□□□□ -1.84
CHD1-205ENST00000508756 CRLF3Q8IUI8 442 aa3.56□□□□□ -1.84
CHD1-205ENST00000508756 OR11H7Q8NGC8 314 aa3.56□□□□□ -1.84
CHD1-205ENST00000508756 OR2AE1Q8NHA4 323 aa3.56□□□□□ -1.84
CHD1-205ENST00000508756 SFXN5Q8TD22 340 aa3.56□□□□□ -1.84
CHD1-205ENST00000508756 DNAJB3Q8WWF6 145 aa3.56□□□□□ -1.84
CHD1-205ENST00000508756 ITFG2Q969R8 447 aa3.56□□□□□ -1.84
CHD1-205ENST00000508756 NARS2Q96I59 477 aaKnown RBP3.56□□□□□ -1.84
CHD1-205ENST00000508756 TSNAXQ99598 290 aaKnown RBP3.56□□□□□ -1.84
CHD1-205ENST00000508756 HDHD2Q9H0R4 259 aa3.56□□□□□ -1.84
CHD1-205ENST00000508756 WFDC1Q9HC57 220 aa3.56□□□□□ -1.84
CHD1-205ENST00000508756 MYOZ1Q9NP98 299 aaPredicted RBP3.56□□□□□ -1.84
CHD1-205ENST00000508756 VAPAQ9P0L0 249 aa3.56□□□□□ -1.84
CHD1-205ENST00000508756 PPIL1Q9Y3C6 166 aa3.56□□□□□ -1.84
CHD1-205ENST00000508756 PUS1Q9Y606 427 aaKnown RBP eCLIP3.56□□□□□ -1.84
CHD1-205ENST00000508756 IGKV1-8A0A0C4DH67 115 aa3.55□□□□□ -1.84
CHD1-205ENST00000508756 FAM240AA0A1B0GVK7 77 aa3.55□□□□□ -1.84
CHD1-205ENST00000508756 KLRC4-KLRK1H3BQV0 150 aa3.55□□□□□ -1.84
CHD1-205ENST00000508756 SHOX2O60902 331 aaPredicted RBP3.55□□□□□ -1.84
CHD1-205ENST00000508756 S100A6P06703 90 aa3.55□□□□□ -1.84
CHD1-205ENST00000508756 CD3GP09693 182 aa3.55□□□□□ -1.84
CHD1-205ENST00000508756 RAB3BP20337 219 aa3.55□□□□□ -1.84
CHD1-205ENST00000508756 RGS6P49758 472 aa3.55□□□□□ -1.84
CHD1-205ENST00000508756 CDKN2DP55273 166 aa3.55□□□□□ -1.84
CHD1-205ENST00000508756 SLC35A1P78382 337 aa3.55□□□□□ -1.84
CHD1-205ENST00000508756 IL5RAQ01344 420 aa3.55□□□□□ -1.84
CHD1-205ENST00000508756 RPL18AQ02543 176 aaKnown RBP3.55□□□□□ -1.84
CHD1-205ENST00000508756 OR4D1Q15615 310 aa3.55□□□□□ -1.84
CHD1-205ENST00000508756 SNRNP35Q16560 246 aaKnown RBP3.55□□□□□ -1.84
CHD1-205ENST00000508756 EXOC3L4Q17RC7 722 aa3.55□□□□□ -1.84
CHD1-205ENST00000508756 SMUG1Q53HV7 270 aa3.55□□□□□ -1.84
CHD1-205ENST00000508756 OR10J3Q5JRS4 329 aa3.55□□□□□ -1.84
CHD1-205ENST00000508756 BHLHA15Q7RTS1 189 aaPredicted RBP3.55□□□□□ -1.84
CHD1-205ENST00000508756 LRRC6Q86X45 466 aa3.55□□□□□ -1.84
CHD1-205ENST00000508756 DAW1Q8N136 415 aa3.55□□□□□ -1.84
CHD1-205ENST00000508756 METTL13Q8N6R0 699 aa3.55□□□□□ -1.84
CHD1-205ENST00000508756 OR2Y1Q8NGV0 311 aa3.55□□□□□ -1.84
CHD1-205ENST00000508756 C15orf40Q8WUR7 153 aa3.55□□□□□ -1.84
CHD1-205ENST00000508756 IFT81Q8WYA0 676 aa3.55□□□□□ -1.84
CHD1-205ENST00000508756 RNF5Q99942 180 aa3.55□□□□□ -1.84
CHD1-205ENST00000508756 DRC3Q9H069 523 aa3.55□□□□□ -1.84
CHD1-205ENST00000508756 OR51B5Q9H339 312 aa3.55□□□□□ -1.84
CHD1-205ENST00000508756 RHBDL2Q9NX52 303 aa3.55□□□□□ -1.84
CHD1-205ENST00000508756 ZNF257Q9Y2Q1 563 aa3.55□□□□□ -1.84
CHD1-205ENST00000508756 SNX24Q9Y343 169 aa3.55□□□□□ -1.84
CHD1-205ENST00000508756 BRCA1P38398 1863 aaKnown RBP3.55□□□□□ -1.84
CHD1-205ENST00000508756 ADAMTS13Q76LX8 1427 aa3.54□□□□□ -1.84
CHD1-205ENST00000508756 IGLV3-12A0A075B6K2 115 aa3.54□□□□□ -1.84
CHD1-205ENST00000508756 M0R1B8 84 aa3.54□□□□□ -1.84
CHD1-205ENST00000508756 GCM2O75603 506 aaPredicted RBP3.54□□□□□ -1.84
CHD1-205ENST00000508756 P2RX1P51575 399 aa3.54□□□□□ -1.84
CHD1-205ENST00000508756 OR10A3P58181 314 aa3.54□□□□□ -1.84
CHD1-205ENST00000508756 CDC20Q12834 499 aa3.54□□□□□ -1.84
CHD1-205ENST00000508756 OR1Q1Q15612 314 aa3.54□□□□□ -1.84
CHD1-205ENST00000508756 ZNHIT3Q15649 155 aaPredicted RBP3.54□□□□□ -1.84
CHD1-205ENST00000508756 SAXO2Q658L1 398 aa3.54□□□□□ -1.84
CHD1-205ENST00000508756 TMEM205Q6UW68 189 aa3.54□□□□□ -1.84
CHD1-205ENST00000508756 Q6ZT83 130 aa3.54□□□□□ -1.84
CHD1-205ENST00000508756 CA13Q8N1Q1 262 aa3.54□□□□□ -1.84
CHD1-205ENST00000508756 COX18Q8N8Q8 333 aa3.54□□□□□ -1.84
CHD1-205ENST00000508756 OR13G1Q8NGZ3 307 aa3.54□□□□□ -1.84
CHD1-205ENST00000508756 LRRC45Q96CN5 670 aa3.54□□□□□ -1.84
CHD1-205ENST00000508756 ZNF251Q9BRH9 671 aa3.54□□□□□ -1.84
CHD1-205ENST00000508756 SLC38A1Q9H2H9 487 aa3.54□□□□□ -1.84
CHD1-205ENST00000508756 RRAGDQ9NQL2 400 aaPredicted RBP3.54□□□□□ -1.84
CHD1-205ENST00000508756 IMP3Q9NV31 184 aaKnown RBP3.54□□□□□ -1.84
CHD1-205ENST00000508756 RBFOX1Q9NWB1 397 aaKnown RBP3.54□□□□□ -1.84
CHD1-205ENST00000508756 RAB23Q9ULC3 237 aa3.54□□□□□ -1.84
CHD1-205ENST00000508756 ABCB11O95342 1321 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms