RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 EGLN1Q9GZT9 426 aa3.8□□□□□ -1.8
NUP54-206ENST00000508465 SHARPINQ9H0F6 387 aa3.8□□□□□ -1.8
NUP54-206ENST00000508465 RACGAP1Q9H0H5 632 aa3.8□□□□□ -1.8
NUP54-206ENST00000508465 HDHD2Q9H0R4 259 aa3.8□□□□□ -1.8
NUP54-206ENST00000508465 SEMA6AQ9H2E6 1030 aa3.8□□□□□ -1.8
NUP54-206ENST00000508465 PPP1R3EQ9H7J1 279 aa3.8□□□□□ -1.8
NUP54-206ENST00000508465 SAP30LQ9HAJ7 183 aa3.8□□□□□ -1.8
NUP54-206ENST00000508465 MYOZ1Q9NP98 299 aaPredicted RBP3.8□□□□□ -1.8
NUP54-206ENST00000508465 CMC2Q9NRP2 79 aa3.8□□□□□ -1.8
NUP54-206ENST00000508465 CYSLTR2Q9NS75 346 aa3.8□□□□□ -1.8
NUP54-206ENST00000508465 TMEM100Q9NV29 134 aa3.8□□□□□ -1.8
NUP54-206ENST00000508465 HIF1ANQ9NWT6 349 aa3.8□□□□□ -1.8
NUP54-206ENST00000508465 NKIRAS2Q9NYR9 191 aa3.8□□□□□ -1.8
NUP54-206ENST00000508465 UBAP1Q9NZ09 502 aa3.8□□□□□ -1.8
NUP54-206ENST00000508465 DNAJC27Q9NZQ0 273 aa3.8□□□□□ -1.8
NUP54-206ENST00000508465 NKX1-2Q9UD57 310 aaPredicted RBP3.8□□□□□ -1.8
NUP54-206ENST00000508465 KCNG2Q9UJ96 466 aa3.8□□□□□ -1.8
NUP54-206ENST00000508465 KLHDC2Q9Y2U9 406 aa3.8□□□□□ -1.8
NUP54-206ENST00000508465 WIPI2Q9Y4P8 454 aa3.8□□□□□ -1.8
NUP54-206ENST00000508465 AP4S1Q9Y587 144 aa3.8□□□□□ -1.8
NUP54-206ENST00000508465 COMMD3-BMI1R4GMX3 469 aa3.8□□□□□ -1.8
NUP54-206ENST00000508465 MALRD1Q5VYJ5 2156 aa3.8□□□□□ -1.8
NUP54-206ENST00000508465 ARHGAP32A7KAX9 2087 aa3.79□□□□□ -1.8
NUP54-206ENST00000508465 A0A087X0M5 115 aa3.79□□□□□ -1.8
NUP54-206ENST00000508465 A0A1B0GX30 115 aa3.79□□□□□ -1.8
NUP54-206ENST00000508465 PGPEP1LA6NFU8 196 aa3.79□□□□□ -1.8
NUP54-206ENST00000508465 GGT3PA6NGU5 568 aa3.79□□□□□ -1.8
NUP54-206ENST00000508465 SAC3D1A6NKF1 404 aa3.79□□□□□ -1.8
NUP54-206ENST00000508465 CD300LBA8K4G0 201 aa3.79□□□□□ -1.8
NUP54-206ENST00000508465 CLDN25C9JDP6 229 aa3.79□□□□□ -1.8
NUP54-206ENST00000508465 G3V2T6 193 aa3.79□□□□□ -1.8
NUP54-206ENST00000508465 M0R135 149 aa3.79□□□□□ -1.8
NUP54-206ENST00000508465 SURF4O15260 269 aa3.79□□□□□ -1.8
NUP54-206ENST00000508465 MAGEB4O15481 346 aaPredicted RBP3.79□□□□□ -1.8
NUP54-206ENST00000508465 MLNRO43193 412 aa3.79□□□□□ -1.8
NUP54-206ENST00000508465 PRKYO43930 277 aa3.79□□□□□ -1.8
NUP54-206ENST00000508465 ATP5HO75947 161 aa3.79□□□□□ -1.8
NUP54-206ENST00000508465 GLCEO94923 617 aa3.79□□□□□ -1.8
NUP54-206ENST00000508465 CYB5R3P00387 301 aaPredicted RBP3.79□□□□□ -1.8
NUP54-206ENST00000508465 TK1P04183 234 aa3.79□□□□□ -1.8
NUP54-206ENST00000508465 HMGN1P05114 100 aa3.79□□□□□ -1.8
NUP54-206ENST00000508465 MRPL3P09001 348 aaKnown RBP3.79□□□□□ -1.8
NUP54-206ENST00000508465 ANXA8P13928 327 aa3.79□□□□□ -1.8
NUP54-206ENST00000508465 ZNF3P17036 446 aa3.79□□□□□ -1.8
NUP54-206ENST00000508465 SRP14P37108 136 aaKnown RBP3.79□□□□□ -1.8
NUP54-206ENST00000508465 NAA10P41227 235 aaPredicted RBP3.79□□□□□ -1.8
NUP54-206ENST00000508465 CX3CR1P49238 355 aa3.79□□□□□ -1.8
NUP54-206ENST00000508465 RASSF2P50749 326 aa3.79□□□□□ -1.8
NUP54-206ENST00000508465 CRISP1P54107 249 aa3.79□□□□□ -1.8
NUP54-206ENST00000508465 KRTAP10-5P60370 271 aa3.79□□□□□ -1.8
NUP54-206ENST00000508465 LCN2P80188 198 aa3.79□□□□□ -1.8
NUP54-206ENST00000508465 MRPS11P82912 194 aaKnown RBP3.79□□□□□ -1.8
NUP54-206ENST00000508465 RPL36AP83881 106 aaKnown RBP3.79□□□□□ -1.8
NUP54-206ENST00000508465 APOFQ13790 326 aa3.79□□□□□ -1.8
NUP54-206ENST00000508465 KPNB1Q14974 876 aaKnown RBP3.79□□□□□ -1.8
NUP54-206ENST00000508465 PTGES3Q15185 160 aaKnown RBP3.79□□□□□ -1.8
NUP54-206ENST00000508465 ZMYND11Q15326 602 aa3.79□□□□□ -1.8
NUP54-206ENST00000508465 MPPED2Q15777 294 aa3.79□□□□□ -1.8
NUP54-206ENST00000508465 ATP6AP1Q15904 470 aa3.79□□□□□ -1.8
NUP54-206ENST00000508465 TEX30Q5JUR7 227 aa3.79□□□□□ -1.8
NUP54-206ENST00000508465 GLYATL3Q5SZD4 288 aa3.79□□□□□ -1.8
NUP54-206ENST00000508465 LINC01590Q5TEZ4 76 aa3.79□□□□□ -1.8
NUP54-206ENST00000508465 FAHD2BQ6P2I3 314 aaPredicted RBP3.79□□□□□ -1.8
NUP54-206ENST00000508465 FAHD1Q6P587 224 aa3.79□□□□□ -1.8
NUP54-206ENST00000508465 FBXW12Q6X9E4 464 aa3.79□□□□□ -1.8
NUP54-206ENST00000508465 PGAP1Q75T13 922 aa3.79□□□□□ -1.8
NUP54-206ENST00000508465 ASRGL1Q7L266 308 aa3.79□□□□□ -1.8
NUP54-206ENST00000508465 MRPL21Q7Z2W9 205 aaKnown RBP3.79□□□□□ -1.8
NUP54-206ENST00000508465 TIGD4Q8IY51 512 aa3.79□□□□□ -1.8
NUP54-206ENST00000508465 C1orf174Q8IYL3 243 aa3.79□□□□□ -1.8
NUP54-206ENST00000508465 ZNF283Q8N7M2 679 aa3.79□□□□□ -1.8
NUP54-206ENST00000508465 TCEANCQ8N8B7 351 aa3.79□□□□□ -1.8
NUP54-206ENST00000508465 OR8G5Q8NG78 346 aa3.79□□□□□ -1.8
NUP54-206ENST00000508465 OR6N2Q8NGY6 317 aa3.79□□□□□ -1.8
NUP54-206ENST00000508465 OR5K1Q8NHB7 308 aa3.79□□□□□ -1.8
NUP54-206ENST00000508465 ST7LQ8TDW4 575 aa3.79□□□□□ -1.8
NUP54-206ENST00000508465 SPRYD4Q8WW59 207 aaPredicted RBP3.79□□□□□ -1.8
NUP54-206ENST00000508465 PYDC1Q8WXC3 89 aa3.79□□□□□ -1.8
NUP54-206ENST00000508465 ST8SIA4Q92187 359 aa3.79□□□□□ -1.8
NUP54-206ENST00000508465 RAB1CQ92928 201 aa3.79□□□□□ -1.8
NUP54-206ENST00000508465 POP5Q969H6 163 aaKnown RBP3.79□□□□□ -1.8
NUP54-206ENST00000508465 SPTSSAQ969W0 71 aa3.79□□□□□ -1.8
NUP54-206ENST00000508465 APOBEC3DQ96AK3 386 aaPredicted RBP3.79□□□□□ -1.8
NUP54-206ENST00000508465 SGK3Q96BR1 496 aa3.79□□□□□ -1.8
NUP54-206ENST00000508465 ZNF799Q96GE5 643 aa3.79□□□□□ -1.8
NUP54-206ENST00000508465 FAHD2AQ96GK7 314 aa3.79□□□□□ -1.8
NUP54-206ENST00000508465 PLEKHA8Q96JA3 519 aa3.79□□□□□ -1.8
NUP54-206ENST00000508465 IL4I1Q96RQ9 567 aa3.79□□□□□ -1.8
NUP54-206ENST00000508465 INTS14Q96SY0 518 aa3.79□□□□□ -1.8
NUP54-206ENST00000508465 TEAD3Q99594 435 aa3.79□□□□□ -1.8
NUP54-206ENST00000508465 PKP2Q99959 881 aa3.79□□□□□ -1.8
NUP54-206ENST00000508465 SLC30A2Q9BRI3 323 aa3.79□□□□□ -1.8
NUP54-206ENST00000508465 TTTY10Q9BZA0 68 aa3.79□□□□□ -1.8
NUP54-206ENST00000508465 RBM38Q9H0Z9 239 aaKnown RBP3.79□□□□□ -1.8
NUP54-206ENST00000508465 ZNF665Q9H7R5 613 aa3.79□□□□□ -1.8
NUP54-206ENST00000508465 YY1AP1Q9H869 796 aa3.79□□□□□ -1.8
NUP54-206ENST00000508465 PAPOLBQ9NRJ5 636 aaKnown RBP3.79□□□□□ -1.8
NUP54-206ENST00000508465 TMEM106BQ9NUM4 274 aa3.79□□□□□ -1.8
NUP54-206ENST00000508465 UFSP2Q9NUQ7 469 aa3.79□□□□□ -1.8
NUP54-206ENST00000508465 ZNF319Q9P2F9 582 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms